BLASTX nr result

ID: Glycyrrhiza24_contig00023687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023687
         (1212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619458.1| RING-H2 finger protein ATL3B [Medicago trunc...   167   4e-39
ref|XP_002533560.1| RING-H2 finger protein ATL5H precursor, puta...   150   5e-34
emb|CBI36742.3| unnamed protein product [Vitis vinifera]              141   3e-31
ref|XP_003520817.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   130   9e-28
ref|XP_003555593.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   129   1e-27

>ref|XP_003619458.1| RING-H2 finger protein ATL3B [Medicago truncatula]
           gi|355494473|gb|AES75676.1| RING-H2 finger protein ATL3B
           [Medicago truncatula]
          Length = 316

 Score =  167 bits (424), Expect = 4e-39
 Identities = 97/208 (46%), Positives = 125/208 (60%), Gaps = 32/208 (15%)
 Frame = -2

Query: 914 VHPQLLQTFPILCYSSLKNHINEEAEGPLQCAVCLTDFDHRDTLRLLPQCNHVFHPPCID 735
           ++ +LL TFPIL YS++K+   ++  GPL+CAVCLTDF  +DTLRLLP+CNHVFHP CID
Sbjct: 98  INKELLNTFPILFYSTIKDVKTDK--GPLECAVCLTDFKEQDTLRLLPKCNHVFHPQCID 155

Query: 734 AWLSCHVTCPVCRANLNHSH---------HFT--------------VSIDAETNNAAQG- 627
           +WL+ HVTCPVCRANLN            +F               ++++  TN+  Q  
Sbjct: 156 SWLASHVTCPVCRANLNQDSCQVAMTIPTNFNNEQTCEENSETVPEITLNNTTNDQNQNP 215

Query: 626 ----SPINGGEEDKGERERASKLKLSRSNSTGHSVVE----VDRYTLRLPEDVKKRIMEG 471
               S  N GE    +    SKLKL RSNSTGHS+VE    V+RYTL LPEDV++ I+  
Sbjct: 216 NQIDSDANKGESINHDDGHPSKLKLLRSNSTGHSLVEQVKCVERYTLMLPEDVRRYILVN 275

Query: 470 VVPPVQRSASYNFVGSSMRGFCWSDSEG 387
                Q S S N V    +G CW+D+EG
Sbjct: 276 HRKSFQLSMSNNMV----KGLCWNDNEG 299


>ref|XP_002533560.1| RING-H2 finger protein ATL5H precursor, putative [Ricinus communis]
           gi|223526560|gb|EEF28817.1| RING-H2 finger protein ATL5H
           precursor, putative [Ricinus communis]
          Length = 267

 Score =  150 bits (380), Expect = 5e-34
 Identities = 85/184 (46%), Positives = 118/184 (64%), Gaps = 2/184 (1%)
 Frame = -2

Query: 908 PQLLQTFPILCYSSLKNHINEEAEGPLQCAVCLTDFDHRDTLRLLPQCNHVFHPPCIDAW 729
           P +++ FP+L YS +K+H+       L+CA+CL++F+  +TLRLLP+CNHVFHP CID W
Sbjct: 92  PDVIEKFPVLVYSHVKDHVKI-----LECAICLSEFEDDETLRLLPKCNHVFHPECIDEW 146

Query: 728 LSCHVTCPVCRANLNHSHHFTVSIDAETNNAAQGSPINGGEEDKGERERASKLKLSRSNS 549
           L+C VTCPVCRANL  +   T      +  A Q   IN  EE  GE   + K +  RS+S
Sbjct: 147 LTCRVTCPVCRANLQEAP--TAESSTVSEVARQEVTINVDEEQSGESPVSRKNQFPRSHS 204

Query: 548 TGHSVVE-VDRYTLRLPED-VKKRIMEGVVPPVQRSASYNFVGSSMRGFCWSDSEGSSRG 375
           TGHS+ E V+R TLRLPE+ ++ +IM      ++R+ S+N +  +M G   S S+GSSRG
Sbjct: 205 TGHSLAENVERCTLRLPEELLRTKIMASA--KLKRAMSFNVI-LAMEG---SSSKGSSRG 258

Query: 374 KRYG 363
           K  G
Sbjct: 259 KHRG 262


>emb|CBI36742.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  141 bits (356), Expect = 3e-31
 Identities = 77/183 (42%), Positives = 113/183 (61%), Gaps = 4/183 (2%)
 Frame = -2

Query: 902 LLQTFPILCYSSLKNHINEEAEGPLQCAVCLTDFDHRDTLRLLPQCNHVFHPPCIDAWLS 723
           +L+TFP   YS +K    +  +G L+CAVCL +F+  +TLRL+P+C+HVFHP CIDAWL+
Sbjct: 147 VLETFPTFEYSVVKGL--KIGKGVLECAVCLNEFEDNETLRLIPKCDHVFHPECIDAWLA 204

Query: 722 CHVTCPVCRANLNHSHHFTVSIDAETNNAAQGSPINGGEEDKGERERASKLKLSRSNSTG 543
            HVTCPVCRANL        ++  + + A + +   G  +  GE  R+      RS+STG
Sbjct: 205 SHVTCPVCRANLTEP-----AVPTDYSAAVEAAESAGESDHDGEDRRSEINAFPRSHSTG 259

Query: 542 HSVVE----VDRYTLRLPEDVKKRIMEGVVPPVQRSASYNFVGSSMRGFCWSDSEGSSRG 375
           HS+++     +R+TL+LPEDV+K+IM+  +            GSS +G+  +  EGSSRG
Sbjct: 260 HSLIQPGENCERFTLKLPEDVRKQIMKRALNRTTSLLVLPRDGSSRQGY-RTAGEGSSRG 318

Query: 374 KRY 366
           K +
Sbjct: 319 KNF 321


>ref|XP_003520817.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 366

 Score =  130 bits (326), Expect = 9e-28
 Identities = 93/224 (41%), Positives = 127/224 (56%), Gaps = 45/224 (20%)
 Frame = -2

Query: 908 PQLLQTFPILCYSSLKNH-INEEAEGPLQCAVCLTDFDHRDTLRLLPQCNHVFHPPCIDA 732
           P L+QTFPIL YS +K H I +EA   L+CAVCL +F+  +TLRLLP+C+HVFHP CID 
Sbjct: 85  PALIQTFPILEYSVVKIHKIGKEA---LECAVCLCEFEDTETLRLLPKCDHVFHPECIDE 141

Query: 731 WLSCHVTCPVCRANLNHSHHF----------------TVSIDAET-NNAAQGSPINGGEE 603
           WLS H TCPVCRANL  +                   T++ D E+ N+A Q +P     E
Sbjct: 142 WLSSHTTCPVCRANLLPTESEDAIANANANGVVPVPETLTRDIESQNDAVQAAPEQQNAE 201

Query: 602 -------------DKG---ERERASKL----KLSRSNSTGHSVVE----VDRYTLRLPED 495
                        DK     R R S+     +  RS+STGHS+V+     DR+TL+LP +
Sbjct: 202 ADPVLPEPEVVSLDKTLNRNRTRGSRSNRPRRFPRSHSTGHSLVQPGENTDRFTLKLPLE 261

Query: 494 VKKRIMEGVVPPVQRSASYNFV---GSSMRGFCWSDSEGSSRGK 372
           V+K+++      +QR++S   +   GSS +G+  +  EGSSRGK
Sbjct: 262 VRKQLIN---RQLQRASSLIVLPREGSSRQGY-RTGGEGSSRGK 301


>ref|XP_003555593.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 336

 Score =  129 bits (324), Expect = 1e-27
 Identities = 82/200 (41%), Positives = 116/200 (58%), Gaps = 23/200 (11%)
 Frame = -2

Query: 902 LLQTFPILCYSSLKNHINEEAEGPLQCAVCLTDFDHRDTLRLLPQCNHVFHPPCIDAWLS 723
           ++ TFP L YS++  +I++  +G L+CAVCL +F+  +TLRL+P+C+HVFHP CID WL+
Sbjct: 94  VIDTFPTLEYSTV--NIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLA 151

Query: 722 CHVTCPVCRANL----NHSHHFTVSIDAETNNAAQGSPINGGEED--------KGERERA 579
            H TCPVCRANL      S H    +DA     AQ       E             R R 
Sbjct: 152 SHTTCPVCRANLVPQPGDSVHGIPILDAPQGIEAQQQQDPKAEPQVLTLNQTLNRNRTRG 211

Query: 578 SK----LKLSRSNSTGHSVV----EVDRYTLRLPEDVKKRIMEGVVPPVQRSASYNFV-- 429
           S+     +  RS+STGHS+V    + +R+TLRLP+ V+K+I++   P + R+ S   +  
Sbjct: 212 SQSGRPRRFPRSHSTGHSLVQPGEDTERFTLRLPQKVRKQILQ--KPELHRARSLVILPR 269

Query: 428 -GSSMRGFCWSDSEGSSRGK 372
            GSS RG+     EGSSRG+
Sbjct: 270 EGSSRRGY--RTGEGSSRGR 287


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