BLASTX nr result

ID: Glycyrrhiza24_contig00023683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023683
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30244.3| unnamed protein product [Vitis vinifera]               97   2e-18
ref|XP_002277401.1| PREDICTED: transcriptional activator DEMETER...    97   2e-18
emb|CAN77395.1| hypothetical protein VITISV_035357 [Vitis vinifera]    97   2e-18
ref|XP_002316517.1| DNA glycosylase [Populus trichocarpa] gi|222...    96   2e-18
gb|AEC12446.1| repressor of gene silencing 1 [Gossypium hirsutum]      94   1e-17

>emb|CBI30244.3| unnamed protein product [Vitis vinifera]
          Length = 1470

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/85 (60%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
 Frame = -1

Query: 243  SSEANPECGQCEPIIEEPATPEQQHTEALESDIEDLYGEDPNEIPEIDFNKEVFTKTIQL 64
            SSEANP    CEPI+E PATPEQ+H + LESDIED   EDP+EIP I  N E FT  +Q 
Sbjct: 1177 SSEANPGINNCEPIVEVPATPEQEHPQILESDIEDTLYEDPDEIPTIKLNIEEFTHNLQN 1236

Query: 63   YMRE----QEGDMSKAIVALTSRSA 1
            YM+     QE DMSKA+VALT   A
Sbjct: 1237 YMQRNMELQESDMSKALVALTPEVA 1261


>ref|XP_002277401.1| PREDICTED: transcriptional activator DEMETER-like [Vitis vinifera]
          Length = 1942

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/85 (60%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
 Frame = -1

Query: 243  SSEANPECGQCEPIIEEPATPEQQHTEALESDIEDLYGEDPNEIPEIDFNKEVFTKTIQL 64
            SSEANP    CEPI+E PATPEQ+H + LESDIED   EDP+EIP I  N E FT  +Q 
Sbjct: 1649 SSEANPGINNCEPIVEVPATPEQEHPQILESDIEDTLYEDPDEIPTIKLNIEEFTHNLQN 1708

Query: 63   YMRE----QEGDMSKAIVALTSRSA 1
            YM+     QE DMSKA+VALT   A
Sbjct: 1709 YMQRNMELQESDMSKALVALTPEVA 1733


>emb|CAN77395.1| hypothetical protein VITISV_035357 [Vitis vinifera]
          Length = 1824

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/85 (60%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
 Frame = -1

Query: 243  SSEANPECGQCEPIIEEPATPEQQHTEALESDIEDLYGEDPNEIPEIDFNKEVFTKTIQL 64
            SSEANP    CEPI+E PATPEQ+H + LESDIED   EDP+EIP I  N E FT  +Q 
Sbjct: 1503 SSEANPGINNCEPIVEVPATPEQEHPQILESDIEDTLYEDPDEIPTIKLNIEEFTHNLQN 1562

Query: 63   YMRE----QEGDMSKAIVALTSRSA 1
            YM+     QE DMSKA+VALT   A
Sbjct: 1563 YMQRNMELQESDMSKALVALTPEVA 1587


>ref|XP_002316517.1| DNA glycosylase [Populus trichocarpa] gi|222865557|gb|EEF02688.1|
           DNA glycosylase [Populus trichocarpa]
          Length = 519

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/90 (54%), Positives = 62/90 (68%), Gaps = 4/90 (4%)
 Frame = -1

Query: 258 PENNPSSEANPECGQCEPIIEEPATPEQQHTEALESDIEDLYGEDPNEIPEIDFNKEVFT 79
           PE+NP      + G C PIIEEPATP+Q++TE  E+DIED +GEDP+EIP I  N E FT
Sbjct: 222 PEDNPHKRHGSDIGSCVPIIEEPATPDQENTELTETDIED-FGEDPDEIPTIKLNMEEFT 280

Query: 78  KTIQLYMRE----QEGDMSKAIVALTSRSA 1
           + +Q YM      QEGDMSKA+VAL   ++
Sbjct: 281 ENLQNYMHTNLELQEGDMSKALVALNPNAS 310


>gb|AEC12446.1| repressor of gene silencing 1 [Gossypium hirsutum]
          Length = 1758

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/89 (52%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
 Frame = -1

Query: 255  ENNPSSEANPECGQCEPIIEEPATPEQQHTEALESDIEDLYGEDPNEIPEIDFNKEVFTK 76
            E N   +A     +C+PIIEEPA+PE + T+  E+DIED++ EDP+EIP I  N E FT+
Sbjct: 1459 EANQHLQAASTVNKCDPIIEEPASPEPECTQVAENDIEDMFSEDPDEIPTIKLNMEEFTQ 1518

Query: 75   TIQLYMRE----QEGDMSKAIVALTSRSA 1
            T+Q YM+     QEGDMSKA+VALT+ +A
Sbjct: 1519 TLQNYMQNNIELQEGDMSKALVALTAEAA 1547


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