BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023676
         (1560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s...   904   0.0  
ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III s...   898   0.0  
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...   868   0.0  
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...   857   0.0  
ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|2...   857   0.0  

>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine
            max]
          Length = 1166

 Score =  904 bits (2335), Expect = 0.0
 Identities = 457/522 (87%), Positives = 480/522 (91%), Gaps = 3/522 (0%)
 Frame = +3

Query: 3    NEKMWLQLNQFPKKVPLMVVMKAMGMESDQEVIQMVGRDPRYSLLLLPSIEECTINGVYT 182
            NEK+WLQLN+FPKKVPLMVVMKAMGMESDQEVIQMVGRDPRYS LLLPSIEEC    VYT
Sbjct: 244  NEKLWLQLNKFPKKVPLMVVMKAMGMESDQEVIQMVGRDPRYSFLLLPSIEECRKCKVYT 303

Query: 183  REQALEYLDSKV-RPMYSNMSSEKEGRAFSVLRDVFLANVPVHQDNFRPKCIYVAVMMRR 359
            +EQALEYLD  V RP YS+ S+EKEG AFS LRDVFLANVPV QDNF+ KCIYVAVMMRR
Sbjct: 304  KEQALEYLDKLVKRPTYSSNSAEKEGAAFSALRDVFLANVPVDQDNFQKKCIYVAVMMRR 363

Query: 360  ILDAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMTNEVENWTNKLLDKPDKAKK 539
            I+DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFK+MT EV+N T+K+LDKPDKAK 
Sbjct: 364  IMDAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKSMTTEVKNLTDKMLDKPDKAKN 423

Query: 540  FDISHLLGR--DIITLGLERTLSTGNFEVRRFKMERKGMTQVLQRLSFISALGQMTRVSP 713
            FDI  LL R   IITLGLERTLSTGNFE++RF+MERKGMTQVLQRLSFI ALG MTRVSP
Sbjct: 424  FDICTLLTRTRSIITLGLERTLSTGNFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSP 483

Query: 714  QFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEEAPLISLCYS 893
            QFEKSRKVSGPRALQPSQWGMLCPCDTPEGE+CGLVKNLALMTHVTTD+EE PLISL YS
Sbjct: 484  QFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEKPLISLFYS 543

Query: 894  LGVEDIEHLSGEELHTPDSFLVIFNGLILGKHRRPQRFAIAMRKLRRAGKIGEFVSVYVN 1073
            L V  IEHL  EELHTPDSFLVIFNGLILGKHRRP  FA  +RKLRRAG+IGEFVSVYVN
Sbjct: 544  LDVARIEHLFAEELHTPDSFLVIFNGLILGKHRRPLHFATRIRKLRRAGEIGEFVSVYVN 603

Query: 1074 EKQRCVYLASDGGRVCRPLVIADKGISRVKDHHMKELTDGVRTFDDFLRDGLIEYLDVNE 1253
            EKQ CVYLASDGGRVCRPLVIADKGISR+K HHMKEL DGV TFDDFLRDGL+EYLDVNE
Sbjct: 604  EKQHCVYLASDGGRVCRPLVIADKGISRIKQHHMKELMDGVCTFDDFLRDGLLEYLDVNE 663

Query: 1254 ENNALIALYEGDATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNI 1433
            ENNALIALYEGDAT ETTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNI
Sbjct: 664  ENNALIALYEGDATSETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNI 723

Query: 1434 AYNQLRRMDTLLYLLVYPQRPLLTTKSIELVGYDKLGAGQNA 1559
            A+NQLRRMD+LLYLLVYPQRPLLTTK+IELVGYDKLGAGQNA
Sbjct: 724  AFNQLRRMDSLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNA 765


>ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine
            max]
          Length = 1152

 Score =  898 bits (2321), Expect = 0.0
 Identities = 454/520 (87%), Positives = 476/520 (91%), Gaps = 2/520 (0%)
 Frame = +3

Query: 6    EKMWLQLNQFPKKVPLMVVMKAMGMESDQEVIQMVGRDPRYSLLLLPSIEECTINGVYTR 185
            EK+WLQLN+FPKKVPLMVVMKAMGMESDQEV QMVGRDPRYS LLLPSIEECT   VYTR
Sbjct: 244  EKLWLQLNKFPKKVPLMVVMKAMGMESDQEVTQMVGRDPRYSFLLLPSIEECTKCKVYTR 303

Query: 186  EQALEYLDSKVRPMYSNMSSEKEGRAFSVLRDVFLANVPVHQDNFRPKCIYVAVMMRRIL 365
            EQALEYLD            + EG AFS LRDVFLANVPV QDNFRPKCIYVAVMMRRI+
Sbjct: 304  EQALEYLD------------KLEGAAFSALRDVFLANVPVDQDNFRPKCIYVAVMMRRIM 351

Query: 366  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMTNEVENWTNKLLDKPDKAKKFD 545
            DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFK+MT EV+N T+K+L+KPDKAK FD
Sbjct: 352  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKSMTTEVKNLTDKMLEKPDKAKNFD 411

Query: 546  ISHLLGR--DIITLGLERTLSTGNFEVRRFKMERKGMTQVLQRLSFISALGQMTRVSPQF 719
            I  LL R   IITLGLERTLSTGNFE++RF+MERKGMTQVLQRLSFI ALG MTRVSPQF
Sbjct: 412  ICTLLTRTRSIITLGLERTLSTGNFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQF 471

Query: 720  EKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEEAPLISLCYSLG 899
            EKSRKVSGPRALQPSQWGMLCPCDTPEGE+CGLVKNLALMTHVTTD+EE PLISLC SLG
Sbjct: 472  EKSRKVSGPRALQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEKPLISLCESLG 531

Query: 900  VEDIEHLSGEELHTPDSFLVIFNGLILGKHRRPQRFAIAMRKLRRAGKIGEFVSVYVNEK 1079
            VED++ LS EELHTPDSFLVIFNGLILGKHRRP  FA A+RKLRRAGKIGEFVSVYVNEK
Sbjct: 532  VEDMKDLSAEELHTPDSFLVIFNGLILGKHRRPLHFATAIRKLRRAGKIGEFVSVYVNEK 591

Query: 1080 QRCVYLASDGGRVCRPLVIADKGISRVKDHHMKELTDGVRTFDDFLRDGLIEYLDVNEEN 1259
            Q CVYLASDGGRVCRPLVIADKGISR+K HHMKEL DGVRTFDDFLRDGL+EYLDVNEEN
Sbjct: 592  QHCVYLASDGGRVCRPLVIADKGISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEEN 651

Query: 1260 NALIALYEGDATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAY 1439
            NALIALYEGDAT ETTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+
Sbjct: 652  NALIALYEGDATSETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAF 711

Query: 1440 NQLRRMDTLLYLLVYPQRPLLTTKSIELVGYDKLGAGQNA 1559
            NQLRRMD+LLYLLVYPQRPLLTTK+IELVGYDKLGAGQNA
Sbjct: 712  NQLRRMDSLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNA 751


>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score =  868 bits (2244), Expect = 0.0
 Identities = 422/522 (80%), Positives = 479/522 (91%), Gaps = 4/522 (0%)
 Frame = +3

Query: 6    EKMWLQLNQFPKKVPLMVVMKAMGMESDQEVIQMVGRDPRYSLLLLPSIEECTINGVYTR 185
            EK+WLQLNQF  K+P+M+VMKAMGMESDQEV+QMVGR+PRYS LLLPS+EEC  +G+YT+
Sbjct: 219  EKIWLQLNQFTSKIPIMIVMKAMGMESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQ 278

Query: 186  EQALEYLDSKVRPM-YSNMSSEKEGRAFSVLRDVFLANVPVHQDNFRPKCIYVAVMMRRI 362
            +QALE+L+ KV+ + + N S EKEGR  ++LRD F+ANVPV Q+NFRPKC+YVAVM+RR+
Sbjct: 279  QQALEFLERKVKKLPFYNPSLEKEGRGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRM 338

Query: 363  LDAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMTNEVENWTNKLLDKPDKAKKF 542
            +DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTM +EV+   + +L KP ++ +F
Sbjct: 339  MDAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRF 398

Query: 543  DISHLLG---RDIITLGLERTLSTGNFEVRRFKMERKGMTQVLQRLSFISALGQMTRVSP 713
            D S  L    RD IT+GLERTLSTGN++V+RF+M RKGM+QV+ RLS+I +LG MT++SP
Sbjct: 399  DFSQCLRFIVRDSITVGLERTLSTGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISP 458

Query: 714  QFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEEAPLISLCYS 893
            QFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD+EE+PLISLCYS
Sbjct: 459  QFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEESPLISLCYS 518

Query: 894  LGVEDIEHLSGEELHTPDSFLVIFNGLILGKHRRPQRFAIAMRKLRRAGKIGEFVSVYVN 1073
            LGVED+E LSGEELHTP+SFL+IFNGLILGKHRRPQRFA A+RKLRRAGKIGEFVSV+VN
Sbjct: 519  LGVEDLELLSGEELHTPNSFLIIFNGLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVN 578

Query: 1074 EKQRCVYLASDGGRVCRPLVIADKGISRVKDHHMKELTDGVRTFDDFLRDGLIEYLDVNE 1253
            EKQ CVY+ASDGGRVCRP+VIADKG SR+K+HHMKEL DGVRTFDDFLRDGLIEYLDVNE
Sbjct: 579  EKQHCVYIASDGGRVCRPVVIADKGKSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNE 638

Query: 1254 ENNALIALYEGDATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNI 1433
            ENNALIALYE DA PETTHIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNI
Sbjct: 639  ENNALIALYEADAKPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNI 698

Query: 1434 AYNQLRRMDTLLYLLVYPQRPLLTTKSIELVGYDKLGAGQNA 1559
            AYNQL RMD+LLYLLVYPQRPLLTT++IELVGYDKLGAGQNA
Sbjct: 699  AYNQLCRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNA 740


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score =  857 bits (2215), Expect = 0.0
 Identities = 422/518 (81%), Positives = 470/518 (90%)
 Frame = +3

Query: 6    EKMWLQLNQFPKKVPLMVVMKAMGMESDQEVIQMVGRDPRYSLLLLPSIEECTINGVYTR 185
            EKM+L LNQF KK+P+MVV+KAMGMESDQEV+QMVGRDPRYS LLLPSIEEC    +YT+
Sbjct: 235  EKMYLCLNQFVKKIPIMVVIKAMGMESDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQ 294

Query: 186  EQALEYLDSKVRPMYSNMSSEKEGRAFSVLRDVFLANVPVHQDNFRPKCIYVAVMMRRIL 365
            ++ALEYLD K            E RA ++LRDVFLANVPVH++NFRPKC+YVAVM+RR++
Sbjct: 295  QKALEYLDGK------------ENRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMM 342

Query: 366  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMTNEVENWTNKLLDKPDKAKKFD 545
            +A+LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTM  EV+   + +L K +++ +FD
Sbjct: 343  EAMLNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFD 402

Query: 546  ISHLLGRDIITLGLERTLSTGNFEVRRFKMERKGMTQVLQRLSFISALGQMTRVSPQFEK 725
            ++  + RD IT GLERTLSTGNF+V+RFKM RKGMTQVL RLS+I++LG MTRVSPQFEK
Sbjct: 403  LAQYIVRDNITNGLERTLSTGNFDVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEK 462

Query: 726  SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEEAPLISLCYSLGVE 905
            SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEE PLISLCY LGVE
Sbjct: 463  SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVE 522

Query: 906  DIEHLSGEELHTPDSFLVIFNGLILGKHRRPQRFAIAMRKLRRAGKIGEFVSVYVNEKQR 1085
            D+E LSGEELHTP+SFLVIFNGLILGKHRRPQ F  +MRKLRRAGKIGEFVSV+VNEKQR
Sbjct: 523  DLELLSGEELHTPNSFLVIFNGLILGKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQR 582

Query: 1086 CVYLASDGGRVCRPLVIADKGISRVKDHHMKELTDGVRTFDDFLRDGLIEYLDVNEENNA 1265
             VYLASDGGRVCRPLVIAD+G+SR+K+HHMKEL DGVRTFDDFLRDGLIEYLDVNEENNA
Sbjct: 583  AVYLASDGGRVCRPLVIADRGVSRIKEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNA 642

Query: 1266 LIALYEGDATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ 1445
            L+ALYEG+ATPETTHIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQ
Sbjct: 643  LVALYEGEATPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQ 702

Query: 1446 LRRMDTLLYLLVYPQRPLLTTKSIELVGYDKLGAGQNA 1559
            L RMD+LLYLLVYPQRPLLTT++IELVGYDKLGAGQNA
Sbjct: 703  LFRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNA 740


>ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|222868352|gb|EEF05483.1|
            predicted protein [Populus trichocarpa]
          Length = 1141

 Score =  857 bits (2215), Expect = 0.0
 Identities = 421/519 (81%), Positives = 475/519 (91%), Gaps = 1/519 (0%)
 Frame = +3

Query: 6    EKMWLQLNQFPKKVPLMVVMKAMGMESDQEVIQMVGRDPRYSLLLLPSIEECTINGVYTR 185
            EKM+L LNQF KK+P+MVVMKAMGMESDQEV+QMVGRDPRYS LLLPSIEEC  +GVYT+
Sbjct: 218  EKMYLCLNQFAKKIPIMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECASHGVYTQ 277

Query: 186  EQALEYLDSKV-RPMYSNMSSEKEGRAFSVLRDVFLANVPVHQDNFRPKCIYVAVMMRRI 362
            +QALEYL++ V R  YS+ S+EKE RA ++LRDVF+ANVPV ++NFRPKCIYVAVM+RR+
Sbjct: 278  QQALEYLEAMVKRSTYSSSSTEKENRALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRM 337

Query: 363  LDAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMTNEVENWTNKLLDKPDKAKKF 542
            ++A+LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTM  EV+   + LL K +++ +F
Sbjct: 338  MEALLNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMITEVQKTADTLLVKQNRSSRF 397

Query: 543  DISHLLGRDIITLGLERTLSTGNFEVRRFKMERKGMTQVLQRLSFISALGQMTRVSPQFE 722
            D S  + RD IT GLER LSTGN++V+RF+M RKG+TQVL RLS++++LG MTR+SPQFE
Sbjct: 398  DFSQYIVRDSITNGLERALSTGNWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFE 457

Query: 723  KSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEEAPLISLCYSLGV 902
            KSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD+EE+PLISLC  LGV
Sbjct: 458  KSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEESPLISLCKCLGV 517

Query: 903  EDIEHLSGEELHTPDSFLVIFNGLILGKHRRPQRFAIAMRKLRRAGKIGEFVSVYVNEKQ 1082
            ED+E LSGEELHTP+SFLVIFNGLILGKHRRPQ+FA AMRKLRRAGKIGEFVSV+VNEKQ
Sbjct: 518  EDLELLSGEELHTPNSFLVIFNGLILGKHRRPQQFANAMRKLRRAGKIGEFVSVFVNEKQ 577

Query: 1083 RCVYLASDGGRVCRPLVIADKGISRVKDHHMKELTDGVRTFDDFLRDGLIEYLDVNEENN 1262
            R VY+ASDGGRVCRPLVIADKG+SR+K+HHM+EL DG RTFDDFL +GLIEYLDVNEENN
Sbjct: 578  RAVYIASDGGRVCRPLVIADKGVSRIKEHHMRELMDGARTFDDFLHEGLIEYLDVNEENN 637

Query: 1263 ALIALYEGDATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN 1442
            ALIALYE +ATPETTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN
Sbjct: 638  ALIALYEWEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN 697

Query: 1443 QLRRMDTLLYLLVYPQRPLLTTKSIELVGYDKLGAGQNA 1559
            Q  RMD+LLYLLVYPQRPLLTT++IELVGYDKLGAGQNA
Sbjct: 698  QASRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNA 736