BLASTX nr result

ID: Glycyrrhiza24_contig00023673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023673
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537145.1| PREDICTED: APO protein 3, mitochondrial-like...   573   e-161
ref|XP_003518143.1| PREDICTED: LOW QUALITY PROTEIN: APO protein ...   480   e-133
emb|CBI17911.3| unnamed protein product [Vitis vinifera]              447   e-123
ref|XP_002263886.1| PREDICTED: APO protein 3, mitochondrial-like...   447   e-123
emb|CAN78766.1| hypothetical protein VITISV_044397 [Vitis vinifera]   443   e-122

>ref|XP_003537145.1| PREDICTED: APO protein 3, mitochondrial-like [Glycine max]
          Length = 404

 Score =  573 bits (1478), Expect = e-161
 Identities = 282/353 (79%), Positives = 301/353 (85%)
 Frame = -1

Query: 1059 VQTIGYLLGRVIQVPVAQRRGINTHFCVWYSTVSTCGDLPRKLDKSERKPPVTSFNELXX 880
            VQTIG LL RV+QV VAQ RGINTHFC+WYS+VSTC +LPRKL+K ERKPPVTSFNEL  
Sbjct: 6    VQTIGSLLERVMQVHVAQLRGINTHFCLWYSSVSTCNELPRKLNKYERKPPVTSFNELKR 65

Query: 879  XXXXXXXXXQNADEIILQPPENGLLVEKLIPIAHEVYAAXXXXXXXXXXXVKYTAIYTCS 700
                     Q   E  LQPPENGLLVE LIPIAHEVYAA           V Y AIYTCS
Sbjct: 66   QARLERKERQKVHENKLQPPENGLLVEHLIPIAHEVYAARCELISTVSRLVNYIAIYTCS 125

Query: 699  LCGEVHVGDPPHKIRTCNVKGSLSSKEHSWVKGGIGHVLPLVESFHLYDRIGRAVSHNEM 520
            LCGEVHVG PPH+IRTC+V+GS SSKEHSWVKGG+ HVLPLVESFHLYDRIGRAVSHNEM
Sbjct: 126  LCGEVHVGHPPHQIRTCDVRGSPSSKEHSWVKGGVEHVLPLVESFHLYDRIGRAVSHNEM 185

Query: 519  LEVDRIPAIVELCVQAGVDIPEYLTRRRAFPVYCVAGRIIDFEKRYPKEISLGNDIEAHG 340
            LEVDRIPAIVELC+QAG DIPEY TRRR+FPVYCVAGRIIDFEKR+PKEISLG DIEAHG
Sbjct: 186  LEVDRIPAIVELCIQAGFDIPEYPTRRRSFPVYCVAGRIIDFEKRFPKEISLGEDIEAHG 245

Query: 339  FWCKKKRLDEDTSSMAMHCDDIQAIAVRGMKAWEKMHTGASKLMEKYAVQTCGYCPEVQV 160
            FW KKKR+D +T+SMAM  DDIQAIAVRGMKAWEKMH GASKLMEKYAVQTCGYCPEVQV
Sbjct: 246  FWFKKKRVDVNTNSMAMQSDDIQAIAVRGMKAWEKMHGGASKLMEKYAVQTCGYCPEVQV 305

Query: 159  GPKGNRVRNCQAYKHQMRDGQHAWQEATINDLVPPVYVYHIRDRQPSKPLVNE 1
            GPKG+R RNCQA+KHQMRDGQHAWQEA I+DL PPVYV+HIRD QP KPLVNE
Sbjct: 306  GPKGHRGRNCQAFKHQMRDGQHAWQEARIDDLAPPVYVFHIRDDQPRKPLVNE 358


>ref|XP_003518143.1| PREDICTED: LOW QUALITY PROTEIN: APO protein 3, mitochondrial-like
           [Glycine max]
          Length = 363

 Score =  480 bits (1235), Expect = e-133
 Identities = 241/321 (75%), Positives = 261/321 (81%)
 Frame = -1

Query: 963 VSTCGDLPRKLDKSERKPPVTSFNELXXXXXXXXXXXQNADEIILQPPENGLLVEKLIPI 784
           +STC +LPRKL+KSERKPPVTSFN+L           Q   E  LQPPENGLLV+ LIPI
Sbjct: 1   MSTCNELPRKLNKSERKPPVTSFNDLKRQARLKKKERQKVHENTLQPPENGLLVDHLIPI 60

Query: 783 AHEVYAAXXXXXXXXXXXVKYTAIYTCSLCGEVHVGDPPHKIRTCNVKGSLSSKEHSWVK 604
           AHEVYAA           V YTAIYTCSLCGEVHVG  PHKIRTC+V+GS SSKEHSW K
Sbjct: 61  AHEVYAARCELISSVSTLVNYTAIYTCSLCGEVHVGHAPHKIRTCDVRGSPSSKEHSWAK 120

Query: 603 GGIGHVLPLVESFHLYDRIGRAVSHNEMLEVDRIPAIVELCVQAGVDIPEYLTRRRAFPV 424
            G+ HVLPLV+SFHLYDRIGRAVSHNEMLEVDRIPAIVELCVQAG++IPEY TRRR+ PV
Sbjct: 121 VGVEHVLPLVDSFHLYDRIGRAVSHNEMLEVDRIPAIVELCVQAGINIPEYPTRRRSSPV 180

Query: 423 YCVAGRIIDFEKRYPKEISLGNDIEAHGFWCKKKRLDEDTSSMAMHCDDIQAIAVRGMKA 244
           Y VAGRIIDFEKR+PKEISLG DIEAHGFW     +D +T+SMAM  DDIQA AVRGMKA
Sbjct: 181 YTVAGRIIDFEKRFPKEISLGEDIEAHGFWL----MDVNTNSMAMQSDDIQATAVRGMKA 236

Query: 243 WEKMHTGASKLMEKYAVQTCGYCPEVQVGPKGNRVRNCQAYKHQMRDGQHAWQEATINDL 64
           WEKM  GASKLM KYAVQTCGY PEVQVGPKG+RVRNCQA+KHQ+RDGQ AW  ATI+DL
Sbjct: 237 WEKMRGGASKLMGKYAVQTCGYYPEVQVGPKGHRVRNCQAFKHQIRDGQRAWXGATIDDL 296

Query: 63  VPPVYVYHIRDRQPSKPLVNE 1
            PPVYVYHIRD Q  KPLVNE
Sbjct: 297 APPVYVYHIRDDQHRKPLVNE 317


>emb|CBI17911.3| unnamed protein product [Vitis vinifera]
          Length = 454

 Score =  447 bits (1150), Expect = e-123
 Identities = 219/323 (67%), Positives = 252/323 (78%)
 Frame = -1

Query: 972  YSTVSTCGDLPRKLDKSERKPPVTSFNELXXXXXXXXXXXQNADEIILQPPENGLLVEKL 793
            +ST STC +LPRKL KSERKP VTS NEL           Q   EI L+PPENGLLV+ L
Sbjct: 86   FSTNSTCKELPRKLKKSERKPWVTSVNELKCKARLQKQARQEVSEITLRPPENGLLVKGL 145

Query: 792  IPIAHEVYAAXXXXXXXXXXXVKYTAIYTCSLCGEVHVGDPPHKIRTCNVKGSLSSKEHS 613
            +P AHEVYAA           VK T IY+C LCGEVHVG PPHKIRTCNV GS +SKEH 
Sbjct: 146  VPFAHEVYAARAKLFTCVSMVVKSTIIYSCRLCGEVHVGHPPHKIRTCNVTGSPASKEHV 205

Query: 612  WVKGGIGHVLPLVESFHLYDRIGRAVSHNEMLEVDRIPAIVELCVQAGVDIPEYLTRRRA 433
            W  GG+ HVLPLVESFHLYDR+GRAVSHNE L+VD+IPAIVELC+QAG+DIPEY TRRR 
Sbjct: 206  WEIGGVEHVLPLVESFHLYDRLGRAVSHNERLQVDQIPAIVELCIQAGLDIPEYPTRRRT 265

Query: 432  FPVYCVAGRIIDFEKRYPKEISLGNDIEAHGFWCKKKRLDEDTSSMAMHCDDIQAIAVRG 253
            FPVY VAGR+IDFE+R+PK  S G DI A+GFW +K+    +  SM +  DD+Q  A++G
Sbjct: 266  FPVYNVAGRMIDFERRFPKYDSPGKDINAYGFW-EKRNQSSENKSMHLLADDVQGFAIQG 324

Query: 252  MKAWEKMHTGASKLMEKYAVQTCGYCPEVQVGPKGNRVRNCQAYKHQMRDGQHAWQEATI 73
            M+AWEKM  GASKLM+KYAVQTCGYC EVQVGPKG+RVRNCQAYKHQMRDGQHAWQEAT+
Sbjct: 325  MEAWEKMWLGASKLMQKYAVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATV 384

Query: 72   NDLVPPVYVYHIRDRQPSKPLVN 4
            +DL+PPV+V+H+RD Q   PLVN
Sbjct: 385  DDLIPPVHVWHVRDVQDGGPLVN 407


>ref|XP_002263886.1| PREDICTED: APO protein 3, mitochondrial-like [Vitis vinifera]
          Length = 481

 Score =  447 bits (1150), Expect = e-123
 Identities = 219/323 (67%), Positives = 252/323 (78%)
 Frame = -1

Query: 972  YSTVSTCGDLPRKLDKSERKPPVTSFNELXXXXXXXXXXXQNADEIILQPPENGLLVEKL 793
            +ST STC +LPRKL KSERKP VTS NEL           Q   EI L+PPENGLLV+ L
Sbjct: 113  FSTNSTCKELPRKLKKSERKPWVTSVNELKCKARLQKQARQEVSEITLRPPENGLLVKGL 172

Query: 792  IPIAHEVYAAXXXXXXXXXXXVKYTAIYTCSLCGEVHVGDPPHKIRTCNVKGSLSSKEHS 613
            +P AHEVYAA           VK T IY+C LCGEVHVG PPHKIRTCNV GS +SKEH 
Sbjct: 173  VPFAHEVYAARAKLFTCVSMVVKSTIIYSCRLCGEVHVGHPPHKIRTCNVTGSPASKEHV 232

Query: 612  WVKGGIGHVLPLVESFHLYDRIGRAVSHNEMLEVDRIPAIVELCVQAGVDIPEYLTRRRA 433
            W  GG+ HVLPLVESFHLYDR+GRAVSHNE L+VD+IPAIVELC+QAG+DIPEY TRRR 
Sbjct: 233  WEIGGVEHVLPLVESFHLYDRLGRAVSHNERLQVDQIPAIVELCIQAGLDIPEYPTRRRT 292

Query: 432  FPVYCVAGRIIDFEKRYPKEISLGNDIEAHGFWCKKKRLDEDTSSMAMHCDDIQAIAVRG 253
            FPVY VAGR+IDFE+R+PK  S G DI A+GFW +K+    +  SM +  DD+Q  A++G
Sbjct: 293  FPVYNVAGRMIDFERRFPKYDSPGKDINAYGFW-EKRNQSSENKSMHLLADDVQGFAIQG 351

Query: 252  MKAWEKMHTGASKLMEKYAVQTCGYCPEVQVGPKGNRVRNCQAYKHQMRDGQHAWQEATI 73
            M+AWEKM  GASKLM+KYAVQTCGYC EVQVGPKG+RVRNCQAYKHQMRDGQHAWQEAT+
Sbjct: 352  MEAWEKMWLGASKLMQKYAVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATV 411

Query: 72   NDLVPPVYVYHIRDRQPSKPLVN 4
            +DL+PPV+V+H+RD Q   PLVN
Sbjct: 412  DDLIPPVHVWHVRDVQDGGPLVN 434


>emb|CAN78766.1| hypothetical protein VITISV_044397 [Vitis vinifera]
          Length = 805

 Score =  443 bits (1139), Expect = e-122
 Identities = 217/323 (67%), Positives = 250/323 (77%)
 Frame = -1

Query: 972  YSTVSTCGDLPRKLDKSERKPPVTSFNELXXXXXXXXXXXQNADEIILQPPENGLLVEKL 793
            +ST S C +LPRKL KSERKP VTS NEL           Q   EI L+PPENGLLV+ L
Sbjct: 423  FSTNSXCKELPRKLKKSERKPWVTSVNELKCKARLQKQARQEVSEITLRPPENGLLVKGL 482

Query: 792  IPIAHEVYAAXXXXXXXXXXXVKYTAIYTCSLCGEVHVGDPPHKIRTCNVKGSLSSKEHS 613
            +P AHEVYAA           VK T IY+C LCGEVHVG PPHKIRTCNV GS +SKEH 
Sbjct: 483  VPFAHEVYAARAKLFTCVSMVVKSTIIYSCRLCGEVHVGHPPHKIRTCNVTGSPASKEHV 542

Query: 612  WVKGGIGHVLPLVESFHLYDRIGRAVSHNEMLEVDRIPAIVELCVQAGVDIPEYLTRRRA 433
            W  GG+ HVLPLVESFHLYDR+GRAVSHNE L+VD+IPAIVELC+QAG+DIPEY TRRR 
Sbjct: 543  WEIGGVEHVLPLVESFHLYDRLGRAVSHNERLQVDQIPAIVELCIQAGLDIPEYPTRRRT 602

Query: 432  FPVYCVAGRIIDFEKRYPKEISLGNDIEAHGFWCKKKRLDEDTSSMAMHCDDIQAIAVRG 253
            FPVY VAGR+IDFE+R+PK  S G DI  +GFW +K+    +  SM +  DD+Q  A++G
Sbjct: 603  FPVYNVAGRMIDFERRFPKYDSPGKDINXYGFW-EKRNQSSENKSMHLLADDVQGFAIQG 661

Query: 252  MKAWEKMHTGASKLMEKYAVQTCGYCPEVQVGPKGNRVRNCQAYKHQMRDGQHAWQEATI 73
            M+AWEKM  GASKLM+KYAVQTCGYC EVQVGPKG+RVRNCQAYKHQMRDGQHAWQEAT+
Sbjct: 662  MEAWEKMWLGASKLMQKYAVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATV 721

Query: 72   NDLVPPVYVYHIRDRQPSKPLVN 4
            +DL+PPV+V+H+RD Q   PLVN
Sbjct: 722  DDLIPPVHVWHVRDVQDGGPLVN 744


Top