BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023658
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594127.1| Pentatricopeptide repeat-containing protein ...   216   2e-54
ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containi...   210   9e-53
ref|XP_002314420.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containi...   178   4e-43
ref|XP_002516788.1| pentatricopeptide repeat-containing protein,...   175   4e-42

>ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124365519|gb|ABN09753.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355483175|gb|AES64378.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  216 bits (549), Expect = 2e-54
 Identities = 105/116 (90%), Positives = 111/116 (95%)
 Frame = -3

Query: 349 EQPKMALELFHKMVASGIKPNEVTMVSIFSAIATVGTLQEGRLAHEYMCSESIPLNDNLR 170
           E PKMALELFHKM+A GIKPNEVTMVS+FSAIAT+GTLQEG+LAHEYM SESIP NDNLR
Sbjct: 428 EHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLR 487

Query: 169 AALIDMYAKCGSINTALQFFNQIRDEVVSVSPWNAIICGLASHGHASMCLEVFSDL 2
           AALIDMYAKCGSIN+ALQFFNQIRDEV SVSPWNAIICGLASHGHASMCLEVFSD+
Sbjct: 488 AALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDM 543


>ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like [Glycine max]
          Length = 912

 Score =  210 bits (535), Expect = 9e-53
 Identities = 100/116 (86%), Positives = 112/116 (96%)
 Frame = -3

Query: 349 EQPKMALELFHKMVASGIKPNEVTMVSIFSAIATVGTLQEGRLAHEYMCSESIPLNDNLR 170
           +Q ++ALELFHKMVASGIKPNEVTMVS+FSAIAT+GTL+EGR AHEY+C+ESIPLNDNLR
Sbjct: 644 DQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLR 703

Query: 169 AALIDMYAKCGSINTALQFFNQIRDEVVSVSPWNAIICGLASHGHASMCLEVFSDL 2
           AALIDMYAKCGSIN+ALQFFNQIRD+  SVSPWNAIICGLASHGHASMCL+VFSD+
Sbjct: 704 AALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDM 759


>ref|XP_002314420.1| predicted protein [Populus trichocarpa] gi|222863460|gb|EEF00591.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  180 bits (456), Expect = 1e-43
 Identities = 85/116 (73%), Positives = 101/116 (87%)
 Frame = -3

Query: 349 EQPKMALELFHKMVASGIKPNEVTMVSIFSAIATVGTLQEGRLAHEYMCSESIPLNDNLR 170
           +QP MALELFH+MV SGI+PNEVTMVS+FSAIA +GTL+EGR AHEY+   SIPLNDNL 
Sbjct: 304 DQPGMALELFHRMVTSGIRPNEVTMVSVFSAIAALGTLKEGRWAHEYVHYNSIPLNDNLS 363

Query: 169 AALIDMYAKCGSINTALQFFNQIRDEVVSVSPWNAIICGLASHGHASMCLEVFSDL 2
           A++IDMYAKCGSINTAL+ F QIRD+  +VSPWN IICGLA+HGHA + LE++SDL
Sbjct: 364 ASIIDMYAKCGSINTALEVFYQIRDKASTVSPWNTIICGLATHGHAKLSLEIYSDL 419



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
 Frame = -3

Query: 349 EQPKMALELFHKMVASGIKPNEVTMVSIFSAIATVGTLQEGRLAHEYMCSESIPLNDNLR 170
           E+ + AL ++  MV++G+ P+EVTM+ + SA      + EG+  H  +   S    D ++
Sbjct: 172 ERLREALMMYRLMVSTGLGPSEVTMIDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQ 231

Query: 169 AALIDMYAKCGSINTA-LQFFNQIRDEVVSVSPWNAIICGLASHGHASMCLEVFSDL 2
           A +I  Y+ CG IN A  Q    ++D V S    NA+I G   +       E+F+++
Sbjct: 232 ATVIHFYSACGRINEACFQLEFGMKDHVAS---RNALIAGFIRNRIIDQARELFNEM 285



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/108 (28%), Positives = 59/108 (54%)
 Frame = -3

Query: 334 ALELFHKMVASGIKPNEVTMVSIFSAIATVGTLQEGRLAHEYMCSESIPLNDNLRAALID 155
           A++++ +M + G+ PNEVTM S+ SA   VG + + R+ H  +          +   L++
Sbjct: 45  AIKVYKEMRSVGVVPNEVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLN 104

Query: 154 MYAKCGSINTALQFFNQIRDEVVSVSPWNAIICGLASHGHASMCLEVF 11
           MY    S+  A   F++++++  +V  WN ++ G +  G A++  EVF
Sbjct: 105 MYCASSSLGEARALFDEMQEK--NVVSWNVMLNGYSKAGFANLAKEVF 150


>ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial [Vitis vinifera]
          Length = 694

 Score =  178 bits (452), Expect = 4e-43
 Identities = 85/116 (73%), Positives = 100/116 (86%)
 Frame = -3

Query: 349 EQPKMALELFHKMVASGIKPNEVTMVSIFSAIATVGTLQEGRLAHEYMCSESIPLNDNLR 170
           EQP +AL+LFH+MVA G++PNE+TMVS+FSAIAT+GTL EGR AHEY+ S SIPLNDNL 
Sbjct: 427 EQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLN 486

Query: 169 AALIDMYAKCGSINTALQFFNQIRDEVVSVSPWNAIICGLASHGHASMCLEVFSDL 2
           AALIDMYAKCGSI  ALQ F +I+D V SVSPWNAIICGLA HGHA++ L++FS L
Sbjct: 487 AALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQL 542



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
 Frame = -3

Query: 334 ALELFHKMVASGIKPNEVTMVSIFSAIATVGTLQEGRLAHEYMCSESIPLNDNLRAALID 155
           AL ++  M+ +G+ PNEV +V + SA      + EG+  H  +        D ++A +I 
Sbjct: 300 ALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIH 359

Query: 154 MYAKCGSINTA-LQFFNQIRDEVVSVSPWNAIICGLASHGHASMCLEVFSDL 2
            YA CG IN A LQF    +D    VS WNA+I G   +G      ++F ++
Sbjct: 360 FYAACGEINLAFLQFELGSKDH---VSSWNALISGFVRNGMIEQARQLFDEM 408


>ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543876|gb|EEF45402.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 710

 Score =  175 bits (443), Expect = 4e-42
 Identities = 84/116 (72%), Positives = 101/116 (87%)
 Frame = -3

Query: 349 EQPKMALELFHKMVASGIKPNEVTMVSIFSAIATVGTLQEGRLAHEYMCSESIPLNDNLR 170
           EQP +ALELFHKMVASGIKPNEVTMVS+ SAIAT GTL+EGR AHEY+ + SI ++DNL 
Sbjct: 441 EQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLS 500

Query: 169 AALIDMYAKCGSINTALQFFNQIRDEVVSVSPWNAIICGLASHGHASMCLEVFSDL 2
           AA+IDMYAKCGSIN AL+ F +IR++  +VSPWNAIICGLA HGHA++ L++FSDL
Sbjct: 501 AAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDL 556



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = -3

Query: 349 EQPKMALELFHKMVASGIKPNEVTMVSIFSAIATVGTLQEGRLAHEYMCSESIPLNDNLR 170
           E+   AL ++  M+++G +PN+V MV + S       + EG+     +        D ++
Sbjct: 309 ERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQ 368

Query: 169 AALIDMYAKCGSINTA-LQFFNQIRDEVVSVSPWNAIICGLASHGHASMCLEVFSDL 2
           + +I +YA CG IN A LQF    ++ V S   WNA+I G   +      +E+F+++
Sbjct: 369 STIIHLYAACGRINEACLQFRIGSKENVAS---WNALIAGYVRNRMIDRAMELFNEM 422