BLASTX nr result

ID: Glycyrrhiza24_contig00023634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023634
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-...   242   5e-62
ref|XP_003630305.1| DNA excision repair protein ERCC-6-like prot...   225   4e-57
ref|XP_003524311.1| PREDICTED: DNA excision repair protein ERCC-...   218   9e-55
ref|XP_002516323.1| ATP binding protein, putative [Ricinus commu...   159   4e-37
ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-...   159   5e-37

>ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 1030

 Score =  242 bits (617), Expect = 5e-62
 Identities = 126/208 (60%), Positives = 140/208 (67%)
 Frame = -3

Query: 624 DESDFGDLVDFDSPIPAAPKNVXXXXXXXXXXXXRDILNELNSKFELLSXXXXXXXXXXX 445
           DES F +L+D DSPIPA P+ V             DILNELNSKFELLS           
Sbjct: 185 DESKFDELIDLDSPIPA-PRKVIQIEESGGKNEITDILNELNSKFELLSVERKPKPKHVE 243

Query: 444 XXXXXXETCEEEGLEFGSAGXXXXXXXXXXXXXXSRDTKNDGDCGVECDSDDSVQELDHF 265
                 + C+++G EFGSAG                 TKN     +E D++DSVQELDHF
Sbjct: 244 GLVGGEKNCDDDGSEFGSAGSSFSPQQESLS----EGTKNGDGDDIEYDANDSVQELDHF 299

Query: 264 EPENDGSIILNGPKSMYKLPGKIAKMLYPHQRDGLKWLWSLHCLGKGGILGDDMGLGKTM 85
           EPE DGSI   GP+S YKL  KIAKMLYPHQR+GLKWLWSLHCLGKGGILGDDMGLGKTM
Sbjct: 300 EPETDGSITFTGPRSTYKLQAKIAKMLYPHQREGLKWLWSLHCLGKGGILGDDMGLGKTM 359

Query: 84  QMCGFLAGLFHSRLIRRAMVVAPKTLLP 1
           QMCGFLAGLFHSRLIRR ++VAPKTLLP
Sbjct: 360 QMCGFLAGLFHSRLIRRVLIVAPKTLLP 387


>ref|XP_003630305.1| DNA excision repair protein ERCC-6-like protein [Medicago
           truncatula] gi|355524327|gb|AET04781.1| DNA excision
           repair protein ERCC-6-like protein [Medicago truncatula]
          Length = 1129

 Score =  225 bits (574), Expect = 4e-57
 Identities = 132/221 (59%), Positives = 142/221 (64%), Gaps = 13/221 (5%)
 Frame = -3

Query: 624 DESDF-GDLVDFDSPIPAAPKNVXXXXXXXXXXXXRDILNELNSKFELLSXXXXXXXXXX 448
           DE  F GDLVDFDSPIP   KNV            RDILNEL+SKF+ LS          
Sbjct: 229 DEPTFDGDLVDFDSPIPVW-KNVIEIEESRGRNDIRDILNELSSKFDELSVEKTKPKTVT 287

Query: 447 XXXXXXXETC------------EEEGLEFGSAGXXXXXXXXXXXXXXSRDTKNDGDCGVE 304
                                 E+EGLEFGSAG               +DTKND   G+E
Sbjct: 288 KPKTVTKPKTVTKPVERGKEIFEDEGLEFGSAGSSFSPKQDPHDISS-KDTKNDSG-GLE 345

Query: 303 CDSDDSVQELDHFEPENDGSIILNGPKSMYKLPGKIAKMLYPHQRDGLKWLWSLHCLGKG 124
            +SDDSVQ LDHFEPENDGSI LN P+S YKL  KIAKMLYPHQR+GLKWLWSLH  GKG
Sbjct: 346 YESDDSVQVLDHFEPENDGSITLNDPRSTYKLQPKIAKMLYPHQREGLKWLWSLHVRGKG 405

Query: 123 GILGDDMGLGKTMQMCGFLAGLFHSRLIRRAMVVAPKTLLP 1
           GILGDDMGLGKTMQ+CGFLAGLFHSRLIRR +VVAPKTLLP
Sbjct: 406 GILGDDMGLGKTMQICGFLAGLFHSRLIRRVLVVAPKTLLP 446


>ref|XP_003524311.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 938

 Score =  218 bits (554), Expect = 9e-55
 Identities = 109/168 (64%), Positives = 122/168 (72%)
 Frame = -3

Query: 504 LNSKFELLSXXXXXXXXXXXXXXXXXETCEEEGLEFGSAGXXXXXXXXXXXXXXSRDTKN 325
           +NSKFELLS                 ++C+++G EFGSAG                 TKN
Sbjct: 159 VNSKFELLSVERKPRPKHVEGLAGGKKSCDDDGSEFGSAGSSFSPQQESLS----EGTKN 214

Query: 324 DGDCGVECDSDDSVQELDHFEPENDGSIILNGPKSMYKLPGKIAKMLYPHQRDGLKWLWS 145
               G+E D+DDSVQELDHFEPENDGSI L GP+S YKL  +IA MLYPHQR+GLKWLWS
Sbjct: 215 GDGDGIEYDADDSVQELDHFEPENDGSITLTGPRSTYKLQARIANMLYPHQREGLKWLWS 274

Query: 144 LHCLGKGGILGDDMGLGKTMQMCGFLAGLFHSRLIRRAMVVAPKTLLP 1
           LHCLGKGGILGDDMGLGKTMQMCGFLAGLFHSRLIRRA++VAPKTLLP
Sbjct: 275 LHCLGKGGILGDDMGLGKTMQMCGFLAGLFHSRLIRRALIVAPKTLLP 322


>ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis]
           gi|223544553|gb|EEF46070.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1109

 Score =  159 bits (402), Expect = 4e-37
 Identities = 76/109 (69%), Positives = 87/109 (79%)
 Frame = -3

Query: 330 KNDGDCGVECDSDDSVQELDHFEPENDGSIILNGPKSMYKLPGKIAKMLYPHQRDGLKWL 151
           KN   C +    D    + D    ++ GSI L+GP+S ++LP KIA MLYPHQRDGLKWL
Sbjct: 353 KNKEPCNLSSPIDLLDDDTDDSVLDDGGSITLSGPRSTFELPSKIATMLYPHQRDGLKWL 412

Query: 150 WSLHCLGKGGILGDDMGLGKTMQMCGFLAGLFHSRLIRRAMVVAPKTLL 4
           WSLHCLGKGGILGDDMGLGKTMQ+CGFLAGLFHSRLI+RA+VVAPKTLL
Sbjct: 413 WSLHCLGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLL 461


>ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
           gi|296088517|emb|CBI37508.3| unnamed protein product
           [Vitis vinifera]
          Length = 1043

 Score =  159 bits (401), Expect = 5e-37
 Identities = 78/105 (74%), Positives = 86/105 (81%), Gaps = 4/105 (3%)
 Frame = -3

Query: 306 ECDSDDSVQELDHFEP----ENDGSIILNGPKSMYKLPGKIAKMLYPHQRDGLKWLWSLH 139
           E D  D V  LD        E++ +I L+GP+S YKLPGKIAKMLYPHQRDGLKWLWSLH
Sbjct: 286 EYDDSDVVDVLDDCTDGSVLEDESAITLSGPRSTYKLPGKIAKMLYPHQRDGLKWLWSLH 345

Query: 138 CLGKGGILGDDMGLGKTMQMCGFLAGLFHSRLIRRAMVVAPKTLL 4
           C GKGGILGDDMGLGKTMQ+CGFLAGLFHS L+RRA+VVAPKTLL
Sbjct: 346 CQGKGGILGDDMGLGKTMQICGFLAGLFHSCLLRRAVVVAPKTLL 390


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