BLASTX nr result

ID: Glycyrrhiza24_contig00023627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023627
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520541.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   316   2e-84
ref|XP_003625295.1| Ubiquitin ligase SINAT3 [Medicago truncatula...   308   5e-82
ref|NP_001240996.1| uncharacterized protein LOC100813966 [Glycin...   305   4e-81
emb|CCG06552.1| E3 ubiquitin ligase-like protein [Lotus japonicus]    305   7e-81
gb|ACU14801.1| unknown [Glycine max]                                  303   2e-80

>ref|XP_003520541.1| PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Glycine max]
          Length = 374

 Score =  316 bits (810), Expect = 2e-84
 Identities = 143/165 (86%), Positives = 154/165 (93%)
 Frame = -1

Query: 495 KDKYFRSGTAMAPGGSVFKEVLESHLLSSDYETGKAKFEAKSNSTFTKSSVGLNGKNGIS 316
           + KY RSG AMAPG SVFKEVLESHL+SSDYE GKAK EAKSNST TKSS+GL+GK+GIS
Sbjct: 56  RKKYCRSGLAMAPGSSVFKEVLESHLMSSDYEMGKAKSEAKSNSTSTKSSIGLSGKSGIS 115

Query: 315 SKNGVHDLLGCPVCKNLMYPPIHQCPNGHTLCSNCKIEVHNLCPTCHHDLENIRCLALEK 136
           S NGV++LLGCPVCKNLMYPPIHQCPNGHTLCS+CK+EVHN+CP+CHHDL NIRCLALEK
Sbjct: 116 SNNGVYELLGCPVCKNLMYPPIHQCPNGHTLCSHCKVEVHNICPSCHHDLGNIRCLALEK 175

Query: 135 VAESLELPCRYQSLGCHDIFPYYAKHKHEQNCGFRPYNCPYAGSE 1
           VAESLELPCRYQSLGCHDIFPYY K KHEQNCGFRPYNCPYAGSE
Sbjct: 176 VAESLELPCRYQSLGCHDIFPYYTKLKHEQNCGFRPYNCPYAGSE 220


>ref|XP_003625295.1| Ubiquitin ligase SINAT3 [Medicago truncatula]
           gi|355500310|gb|AES81513.1| Ubiquitin ligase SINAT3
           [Medicago truncatula]
          Length = 310

 Score =  308 bits (790), Expect = 5e-82
 Identities = 143/156 (91%), Positives = 148/156 (94%), Gaps = 1/156 (0%)
 Frame = -1

Query: 465 MAPGGSVFKEVLESHLLSSDYETGKAKFEAKSNSTFTKS-SVGLNGKNGISSKNGVHDLL 289
           MAPGG +FKEVLESHLL+SDYETGKAK EAK NST TKS SVGLNGK+G SSKNGVHDLL
Sbjct: 1   MAPGGGIFKEVLESHLLTSDYETGKAKSEAKINSTLTKSTSVGLNGKHGTSSKNGVHDLL 60

Query: 288 GCPVCKNLMYPPIHQCPNGHTLCSNCKIEVHNLCPTCHHDLENIRCLALEKVAESLELPC 109
           GCPVCKNLMYPPI+QCPNGHTLCSNCKIEVHNLCPTCHHDL NIRCLALEKVAESLELPC
Sbjct: 61  GCPVCKNLMYPPIYQCPNGHTLCSNCKIEVHNLCPTCHHDLGNIRCLALEKVAESLELPC 120

Query: 108 RYQSLGCHDIFPYYAKHKHEQNCGFRPYNCPYAGSE 1
           RYQSLGC+DIFPYYAK KHEQNCGFRPYNCPYAGSE
Sbjct: 121 RYQSLGCNDIFPYYAKLKHEQNCGFRPYNCPYAGSE 156


>ref|NP_001240996.1| uncharacterized protein LOC100813966 [Glycine max]
           gi|255646961|gb|ACU23950.1| unknown [Glycine max]
          Length = 309

 Score =  305 bits (782), Expect = 4e-81
 Identities = 138/155 (89%), Positives = 147/155 (94%)
 Frame = -1

Query: 465 MAPGGSVFKEVLESHLLSSDYETGKAKFEAKSNSTFTKSSVGLNGKNGISSKNGVHDLLG 286
           MAPG SVFKEVLESHL+SSDYETGKAK EAKSN T TKSSVGL+GK+GISS NGV++LLG
Sbjct: 1   MAPGSSVFKEVLESHLMSSDYETGKAKSEAKSNITSTKSSVGLSGKSGISSNNGVYELLG 60

Query: 285 CPVCKNLMYPPIHQCPNGHTLCSNCKIEVHNLCPTCHHDLENIRCLALEKVAESLELPCR 106
           CPVCKNLMYPPIHQCPNGHTLCS+CK+EVHN+CP+CHHDL NIRCLALEKVAESLELPCR
Sbjct: 61  CPVCKNLMYPPIHQCPNGHTLCSHCKVEVHNICPSCHHDLGNIRCLALEKVAESLELPCR 120

Query: 105 YQSLGCHDIFPYYAKHKHEQNCGFRPYNCPYAGSE 1
           YQSLGCHDIFPYY K KHEQNCGFRPYNCPYAGSE
Sbjct: 121 YQSLGCHDIFPYYTKLKHEQNCGFRPYNCPYAGSE 155


>emb|CCG06552.1| E3 ubiquitin ligase-like protein [Lotus japonicus]
          Length = 309

 Score =  305 bits (780), Expect = 7e-81
 Identities = 140/155 (90%), Positives = 145/155 (93%)
 Frame = -1

Query: 465 MAPGGSVFKEVLESHLLSSDYETGKAKFEAKSNSTFTKSSVGLNGKNGISSKNGVHDLLG 286
           MAPGG VFKEVLESHLLSSDYETGKAK EAKS+STF KSSVG  GKN ISSKNGV+DLL 
Sbjct: 1   MAPGGGVFKEVLESHLLSSDYETGKAKSEAKSSSTFPKSSVGSTGKNEISSKNGVYDLLK 60

Query: 285 CPVCKNLMYPPIHQCPNGHTLCSNCKIEVHNLCPTCHHDLENIRCLALEKVAESLELPCR 106
           CPVCKNLMYPPIHQCPNGHTLCSNCKIEVHN+CPTC HDLENIRCLALEKVAESLELPC+
Sbjct: 61  CPVCKNLMYPPIHQCPNGHTLCSNCKIEVHNICPTCDHDLENIRCLALEKVAESLELPCK 120

Query: 105 YQSLGCHDIFPYYAKHKHEQNCGFRPYNCPYAGSE 1
           YQSLGCHDIFPYY K KHEQ+CGFRPYNCPYAGSE
Sbjct: 121 YQSLGCHDIFPYYTKLKHEQSCGFRPYNCPYAGSE 155


>gb|ACU14801.1| unknown [Glycine max]
          Length = 213

 Score =  303 bits (777), Expect = 2e-80
 Identities = 136/155 (87%), Positives = 146/155 (94%)
 Frame = -1

Query: 465 MAPGGSVFKEVLESHLLSSDYETGKAKFEAKSNSTFTKSSVGLNGKNGISSKNGVHDLLG 286
           MAPG SVFKEVLESHL+SSDYE GKAK EAKSNST TKSS+GL+GK+GISS NGV++LLG
Sbjct: 1   MAPGSSVFKEVLESHLMSSDYEMGKAKSEAKSNSTSTKSSIGLSGKSGISSNNGVYELLG 60

Query: 285 CPVCKNLMYPPIHQCPNGHTLCSNCKIEVHNLCPTCHHDLENIRCLALEKVAESLELPCR 106
           CPVCKNLMYPPIHQCPNGHTLCS+CK+EVHN+CP+CHHDL NIRCL LEKVAESLELPCR
Sbjct: 61  CPVCKNLMYPPIHQCPNGHTLCSHCKVEVHNICPSCHHDLGNIRCLTLEKVAESLELPCR 120

Query: 105 YQSLGCHDIFPYYAKHKHEQNCGFRPYNCPYAGSE 1
           YQSLGCHDIFPYY K KHEQNCGFRPYNCPYAGSE
Sbjct: 121 YQSLGCHDIFPYYTKLKHEQNCGFRPYNCPYAGSE 155


Top