BLASTX nr result

ID: Glycyrrhiza24_contig00023584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023584
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-...   280   3e-73
ref|XP_003555635.1| PREDICTED: high mobility group B protein 15-...   265   2e-68
ref|XP_003592799.1| High mobility group protein B3 [Medicago tru...   257   3e-66
emb|CBI17313.3| unnamed protein product [Vitis vinifera]              231   2e-58
ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-...   231   2e-58

>ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-like [Glycine max]
          Length = 425

 Score =  280 bits (717), Expect = 3e-73
 Identities = 145/203 (71%), Positives = 158/203 (77%)
 Frame = -1

Query: 991 VTIGSEKLKGVLYQAPQSSLLPASHHNAFANNDNASAPPGVHXXXXXXXXXXXXRDPAHP 812
           VTIGSEKLKGVLYQAPQ+ +L ASHH+A A N+NASA  GVH            RDPAHP
Sbjct: 207 VTIGSEKLKGVLYQAPQNPVLVASHHSASAKNNNASASLGVHRRRRRKKSEIKRRDPAHP 266

Query: 811 KPNRSGYNFFFAEQHARLKPLHQGKDREISRMIGELWNKLNESEKAVYQDKAMKDKERYR 632
           KPNRSGYNFFFAEQHARLK LH GKDREISRMIGELWNKL ESEK VYQ+KAMKDKERYR
Sbjct: 267 KPNRSGYNFFFAEQHARLKLLHHGKDREISRMIGELWNKLKESEKTVYQEKAMKDKERYR 326

Query: 631 AEMEDYRERLKMDQVISHAVPLQQRLPEPDTDMLDADMKLDEAGGADSPQTPXXXXXXXX 452
           AEMEDYRE+ KM QVIS AVPLQQRLPEPD DMLD D+K+DEA G DSPQTP        
Sbjct: 327 AEMEDYREKQKMGQVISDAVPLQQRLPEPDADMLDVDIKMDEAEG-DSPQTPEESSGGSD 385

Query: 451 XXXXDKATEKDSDVDALPVMGLG 383
               +K  E+  D+DALPV+G+G
Sbjct: 386 YEDYNKTAERGFDMDALPVIGMG 408


>ref|XP_003555635.1| PREDICTED: high mobility group B protein 15-like [Glycine max]
          Length = 419

 Score =  265 bits (676), Expect = 2e-68
 Identities = 143/204 (70%), Positives = 154/204 (75%), Gaps = 1/204 (0%)
 Frame = -1

Query: 991 VTIGSEKLKGVLYQAPQSSLLPASHHNAFANNDNASAPPGVHXXXXXXXXXXXXRDPAHP 812
           VTIGSEKLKGVLYQAPQ+ +L ASHH+A ANN+NASA  GVH            RDPAHP
Sbjct: 206 VTIGSEKLKGVLYQAPQNPVLTASHHSASANNNNASASLGVHRRRRRKKSEIKRRDPAHP 265

Query: 811 KPNRSGYNFFFAEQHARLKPLHQGKDREISRMIGELWNKLNESEKAVYQDKAMKDKERYR 632
           KPNRSGYNFFFAEQHARLK LH GKDREISRMIGELWNKL ESEK VYQ+KAMKDKERYR
Sbjct: 266 KPNRSGYNFFFAEQHARLKLLHHGKDREISRMIGELWNKLKESEKTVYQEKAMKDKERYR 325

Query: 631 AEMEDYRERLKMDQVISHAVPLQQRLPEPDTDMLDADMKLDEAGGADSPQTP-XXXXXXX 455
            EMEDYRE+LKM  VIS AVPLQQRLPEPDTDM      LDEA G DSPQTP        
Sbjct: 326 VEMEDYREKLKMGPVISDAVPLQQRLPEPDTDM------LDEAEG-DSPQTPEESSSGGS 378

Query: 454 XXXXXDKATEKDSDVDALPVMGLG 383
                +K  E+  D+DALPV+G+G
Sbjct: 379 DYEDYNKTAERGFDMDALPVIGMG 402


>ref|XP_003592799.1| High mobility group protein B3 [Medicago truncatula]
           gi|355481847|gb|AES63050.1| High mobility group protein
           B3 [Medicago truncatula]
          Length = 417

 Score =  257 bits (657), Expect = 3e-66
 Identities = 139/204 (68%), Positives = 153/204 (75%), Gaps = 1/204 (0%)
 Frame = -1

Query: 991 VTIGSEKLKGVLYQAPQSSLLPASHHNAFANNDNASAPPGVHXXXXXXXXXXXXRDPAHP 812
           VTIGSEKLKGVLYQAPQ+ +LPASHH+  ANN+N +A  GVH            RDPAHP
Sbjct: 207 VTIGSEKLKGVLYQAPQNPVLPASHHSVPANNNNVTASVGVHRRRRRKKSEMKKRDPAHP 266

Query: 811 KPNRSGYNFFFAEQHARLKPLHQGKDREISRMIGELWNKLNESEKAVYQDKAMKDKERYR 632
           KPNRSGYNFFFAEQH RLKPLH+GKDREISR IGELWNKL ESEKAVYQDKA+KDKERY 
Sbjct: 267 KPNRSGYNFFFAEQHPRLKPLHRGKDREISRTIGELWNKLPESEKAVYQDKAVKDKERYI 326

Query: 631 AEMEDYRERLKMDQVISHAVPLQQRLPEPDTDMLDADMKLDEAGGADSPQTP-XXXXXXX 455
            EME YRE+LK D+VIS AVPL+QRLPEPDTDML+A+        ADS QTP        
Sbjct: 327 TEMEYYREKLKNDEVISDAVPLRQRLPEPDTDMLNAE--------ADSLQTPEQSSLDGS 378

Query: 454 XXXXXDKATEKDSDVDALPVMGLG 383
                DKA EKD  VD+LPV+GLG
Sbjct: 379 DDYEDDKAKEKDFSVDSLPVIGLG 402


>emb|CBI17313.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  231 bits (589), Expect = 2e-58
 Identities = 123/207 (59%), Positives = 144/207 (69%), Gaps = 4/207 (1%)
 Frame = -1

Query: 991 VTIGSEKLKGVLYQAPQSSLLPASHHNAFANNDNASAP--PGVHXXXXXXXXXXXXRDPA 818
           VTIG+EKLKGVLY+APQ+       + +   N+  S P  P VH            RDPA
Sbjct: 230 VTIGTEKLKGVLYEAPQTPARQVPQYFSVITNNTESTPAAPTVHRRRRRKKSEIKKRDPA 289

Query: 817 HPKPNRSGYNFFFAEQHARLKPLHQGKDREISRMIGELWNKLNESEKAVYQDKAMKDKER 638
           HPKPNRSGYNFFFAEQHARLKPLH GKDREISRMIGELW KL E+EKAVYQ+KA+KDKER
Sbjct: 290 HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWTKLKENEKAVYQEKAVKDKER 349

Query: 637 YRAEMEDYRERLKMDQVISHAVPLQQRLPEPDTDMLDADMKLDEAGGADSPQTP--XXXX 464
           YR EMEDYRERLKM Q+IS AVP+QQRLP  D DM++A+ K +  GG +SPQTP      
Sbjct: 350 YRVEMEDYRERLKMGQIISDAVPIQQRLPHADVDMVEAEAKTEMEGG-ESPQTPENESSS 408

Query: 463 XXXXXXXXDKATEKDSDVDALPVMGLG 383
                   DK  EK+ D++  P +G+G
Sbjct: 409 GKTDSDDDDKTAEKEFDMETYPGVGVG 435


>ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-like [Vitis vinifera]
          Length = 482

 Score =  231 bits (589), Expect = 2e-58
 Identities = 123/207 (59%), Positives = 144/207 (69%), Gaps = 4/207 (1%)
 Frame = -1

Query: 991 VTIGSEKLKGVLYQAPQSSLLPASHHNAFANNDNASAP--PGVHXXXXXXXXXXXXRDPA 818
           VTIG+EKLKGVLY+APQ+       + +   N+  S P  P VH            RDPA
Sbjct: 229 VTIGTEKLKGVLYEAPQTPARQVPQYFSVITNNTESTPAAPTVHRRRRRKKSEIKKRDPA 288

Query: 817 HPKPNRSGYNFFFAEQHARLKPLHQGKDREISRMIGELWNKLNESEKAVYQDKAMKDKER 638
           HPKPNRSGYNFFFAEQHARLKPLH GKDREISRMIGELW KL E+EKAVYQ+KA+KDKER
Sbjct: 289 HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWTKLKENEKAVYQEKAVKDKER 348

Query: 637 YRAEMEDYRERLKMDQVISHAVPLQQRLPEPDTDMLDADMKLDEAGGADSPQTP--XXXX 464
           YR EMEDYRERLKM Q+IS AVP+QQRLP  D DM++A+ K +  GG +SPQTP      
Sbjct: 349 YRVEMEDYRERLKMGQIISDAVPIQQRLPHADVDMVEAEAKTEMEGG-ESPQTPENESSS 407

Query: 463 XXXXXXXXDKATEKDSDVDALPVMGLG 383
                   DK  EK+ D++  P +G+G
Sbjct: 408 GKTDSDDDDKTAEKEFDMETYPGVGVG 434


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