BLASTX nr result

ID: Glycyrrhiza24_contig00023569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023569
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550631.1| PREDICTED: zinc finger CCCH domain-containin...   194   5e-48
ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containin...   193   1e-47
ref|XP_002514115.1| nucleic acid binding protein, putative [Rici...   176   2e-42
ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containin...   166   1e-39
ref|XP_002332828.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-39

>ref|XP_003550631.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Glycine max]
          Length = 552

 Score =  194 bits (494), Expect = 5e-48
 Identities = 94/111 (84%), Positives = 100/111 (90%)
 Frame = +2

Query: 2   SDSAISELVQEIKPRYHIAGSKGIYYAREPYANADAVHITRFIGLASVGNRDKQKFIHAI 181
           SDS +SELVQEIKPRYHIAG+KGIYYAREPY+N DAVH+TRFIGLASVGNRDKQKFIHAI
Sbjct: 183 SDSTVSELVQEIKPRYHIAGTKGIYYAREPYSNVDAVHVTRFIGLASVGNRDKQKFIHAI 242

Query: 182 SPTPASTMSSTEIAMKTTNTTSSPYTSMEKKASPEDNTKRSSDGISDSHYW 334
           SPTPASTMSSTEIAMKTTNTT SPYT  EK+ SP D+ KRSSD ISD  YW
Sbjct: 243 SPTPASTMSSTEIAMKTTNTTLSPYTFKEKRTSPMDSAKRSSDSISDPQYW 293


>ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Glycine max]
          Length = 601

 Score =  193 bits (491), Expect = 1e-47
 Identities = 93/110 (84%), Positives = 100/110 (90%)
 Frame = +2

Query: 5   DSAISELVQEIKPRYHIAGSKGIYYAREPYANADAVHITRFIGLASVGNRDKQKFIHAIS 184
           DS +SELVQEIKPRYHIAG+KGIYYAREPY+N DAVH+TRFIGLASVGN+DKQKFIHAIS
Sbjct: 186 DSTVSELVQEIKPRYHIAGTKGIYYAREPYSNVDAVHVTRFIGLASVGNKDKQKFIHAIS 245

Query: 185 PTPASTMSSTEIAMKTTNTTSSPYTSMEKKASPEDNTKRSSDGISDSHYW 334
           PTPASTMSSTEIAMKTTNTT SPYT  EK+ SP D+TKRSSD ISD  YW
Sbjct: 246 PTPASTMSSTEIAMKTTNTTLSPYTYEEKRTSPMDSTKRSSDSISDPQYW 295


>ref|XP_002514115.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223546571|gb|EEF48069.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 606

 Score =  176 bits (446), Expect = 2e-42
 Identities = 80/111 (72%), Positives = 99/111 (89%)
 Frame = +2

Query: 2   SDSAISELVQEIKPRYHIAGSKGIYYAREPYANADAVHITRFIGLASVGNRDKQKFIHAI 181
           SDS +SELV EIKPRYHIAG+KG+++AREPY+N+DAVH+TRF+GLASVGN+DKQKFIHAI
Sbjct: 186 SDSTVSELVAEIKPRYHIAGTKGVFFAREPYSNSDAVHVTRFLGLASVGNKDKQKFIHAI 245

Query: 182 SPTPASTMSSTEIAMKTTNTTSSPYTSMEKKASPEDNTKRSSDGISDSHYW 334
           SPTP STM+S EI+MK +NTT SPYT +E+ A+P++ TKR SD +SDS YW
Sbjct: 246 SPTPGSTMTSAEISMKPSNTTLSPYTFIEQAAAPKEGTKRPSDSMSDSQYW 296


>ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Cucumis sativus] gi|449489882|ref|XP_004158448.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           64-like [Cucumis sativus]
          Length = 606

 Score =  166 bits (421), Expect = 1e-39
 Identities = 76/111 (68%), Positives = 95/111 (85%)
 Frame = +2

Query: 2   SDSAISELVQEIKPRYHIAGSKGIYYAREPYANADAVHITRFIGLASVGNRDKQKFIHAI 181
           SD+ ISELV EIKPRYHIAG+KG+++AREPY+N DAVH+TRF+GLASVGN++KQKFIHAI
Sbjct: 186 SDATISELVVEIKPRYHIAGTKGVFFAREPYSNVDAVHVTRFLGLASVGNKEKQKFIHAI 245

Query: 182 SPTPASTMSSTEIAMKTTNTTSSPYTSMEKKASPEDNTKRSSDGISDSHYW 334
           SP P+STMS+ EI+MK  NTT SPYT  E+K+   D+ KRSS+ +S+S YW
Sbjct: 246 SPIPSSTMSAVEISMKPPNTTLSPYTLTERKSEASDSAKRSSNSVSESQYW 296


>ref|XP_002332828.1| predicted protein [Populus trichocarpa] gi|222833259|gb|EEE71736.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  166 bits (421), Expect = 1e-39
 Identities = 78/111 (70%), Positives = 93/111 (83%)
 Frame = +2

Query: 2   SDSAISELVQEIKPRYHIAGSKGIYYAREPYANADAVHITRFIGLASVGNRDKQKFIHAI 181
           SDS++SELV EIKPRYH AG+KG++YAREPY+N DAVH+TRF GLA VGN+DKQKFIHAI
Sbjct: 181 SDSSVSELVAEIKPRYHFAGTKGVFYAREPYSNVDAVHVTRFFGLAMVGNKDKQKFIHAI 240

Query: 182 SPTPASTMSSTEIAMKTTNTTSSPYTSMEKKASPEDNTKRSSDGISDSHYW 334
           SPTPASTMS+ EI+MK  NTT SPYT +  K + E+ TKRS+  +SDS YW
Sbjct: 241 SPTPASTMSAAEISMKPPNTTLSPYTLVVDKTALEEVTKRSTASVSDSQYW 291


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