BLASTX nr result

ID: Glycyrrhiza24_contig00023540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023540
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539766.1| PREDICTED: auxin response factor 18-like [Gl...   196   2e-48
ref|XP_003538160.1| PREDICTED: auxin response factor 18-like [Gl...   192   2e-47
ref|XP_003540185.1| PREDICTED: auxin response factor 18-like [Gl...   170   1e-40
ref|XP_003597256.1| Auxin response factor [Medicago truncatula] ...   164   7e-39
ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vi...   143   2e-32

>ref|XP_003539766.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 701

 Score =  196 bits (498), Expect = 2e-48
 Identities = 112/153 (73%), Positives = 125/153 (81%), Gaps = 11/153 (7%)
 Frame = -1

Query: 428 IHQH--HNGVSNGNI-TNHDKNRESLSCLLTIGKSDKSLEKSDDVNKKHQFLLFGQPILT 258
           IHQ   +N +SNGN+ TNHDK++ESLSC LT+GKS KSLEKSDDV KKHQFLLFGQPILT
Sbjct: 472 IHQLGVYNEISNGNMMTNHDKSKESLSCFLTMGKSTKSLEKSDDV-KKHQFLLFGQPILT 530

Query: 257 EQQISRNCSRDVFAH--------KDKEKCFLDDSSQCALSKQFSPGKACAAAEFSWHQLG 102
           EQQIS +CS DV +H        KDK KC +DDS Q  LS+QFSPGKA ++AEFSW QLG
Sbjct: 531 EQQIS-SCSGDVLSHRKRSVSDDKDKAKCLMDDS-QSTLSQQFSPGKA-SSAEFSW-QLG 586

Query: 101 LDTGHCKVFLESEDVGRTLDLSSLGSYEELYRR 3
           LDTGHCKVFLESEDVGRTLDLS  GSYE+LYRR
Sbjct: 587 LDTGHCKVFLESEDVGRTLDLSLFGSYEDLYRR 619


>ref|XP_003538160.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 697

 Score =  192 bits (488), Expect = 2e-47
 Identities = 108/147 (73%), Positives = 120/147 (81%), Gaps = 9/147 (6%)
 Frame = -1

Query: 416 HNGVSNGNI-TNHDKNRESLSCLLTIGKSDKSLEKSDDVNKKHQFLLFGQPILTEQQISR 240
           + G+S+GN+ T HDK++ESLSC LT+GKS KSLEKSDDV KKHQFLLFGQPILTEQQIS 
Sbjct: 474 YTGISSGNMMTKHDKSKESLSCFLTMGKSSKSLEKSDDV-KKHQFLLFGQPILTEQQIS- 531

Query: 239 NCSRDVFAH--------KDKEKCFLDDSSQCALSKQFSPGKACAAAEFSWHQLGLDTGHC 84
           +CSRDV +         KDK KC LDDS Q  LS+QFSPGKA ++AEF W QLGLDTGHC
Sbjct: 532 SCSRDVLSRGKRSLGDEKDKAKCVLDDS-QSTLSQQFSPGKA-SSAEFFW-QLGLDTGHC 588

Query: 83  KVFLESEDVGRTLDLSSLGSYEELYRR 3
           KVFLESEDVGRTLDLS  GSYEELYRR
Sbjct: 589 KVFLESEDVGRTLDLSQFGSYEELYRR 615


>ref|XP_003540185.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 700

 Score =  170 bits (430), Expect = 1e-40
 Identities = 95/148 (64%), Positives = 108/148 (72%), Gaps = 10/148 (6%)
 Frame = -1

Query: 416 HNGVSNGNITNHDKNRESLSCLLTIGKSDKSLEKSDDVNKKHQFLLFGQPILTEQQISRN 237
           H G+ NGNITNH K++ESLSCLLT+G S+KSLEKSD V K+HQFLLFGQPILTEQQISR+
Sbjct: 478 HTGICNGNITNHGKSKESLSCLLTMGNSNKSLEKSDHV-KRHQFLLFGQPILTEQQISRS 536

Query: 236 CSRDVFAH----------KDKEKCFLDDSSQCALSKQFSPGKACAAAEFSWHQLGLDTGH 87
            S DV +           + KEK FL DS         SPGK+ +  EFSW Q+G DT H
Sbjct: 537 SS-DVLSQNFTVTDDENKEKKEKGFLSDSQSSV-----SPGKSSSTTEFSW-QVGSDTSH 589

Query: 86  CKVFLESEDVGRTLDLSSLGSYEELYRR 3
           CKVF+ESEDVGRTLDLS LGSYEELY R
Sbjct: 590 CKVFIESEDVGRTLDLSCLGSYEELYMR 617


>ref|XP_003597256.1| Auxin response factor [Medicago truncatula]
           gi|355486304|gb|AES67507.1| Auxin response factor
           [Medicago truncatula]
          Length = 755

 Score =  164 bits (415), Expect = 7e-39
 Identities = 93/138 (67%), Positives = 110/138 (79%), Gaps = 9/138 (6%)
 Frame = -1

Query: 389 TNHD-KNRESLSCLLTIGKSDK-SLE-KSDDVNKKHQFLLFGQPILTEQQISRNCSRD-- 225
           TNHD K++ES+SCLLTIG S K SLE KSD+ + +HQFLLFGQPILTEQQISR  S D  
Sbjct: 537 TNHDNKSKESISCLLTIGNSHKRSLEIKSDNNDNRHQFLLFGQPILTEQQISRKDSSDDV 596

Query: 224 -VFAHKDKEKCFLDDSSQCALSKQFSPGKAC---AAAEFSWHQLGLDTGHCKVFLESEDV 57
            +   KDKEK F  D++Q ++S+QFSP K+    A+A+F W QLGLDTGHCKVFLESEDV
Sbjct: 597 LLSKKKDKEKWFFSDTTQSSISEQFSPAKSSTTSASADFCW-QLGLDTGHCKVFLESEDV 655

Query: 56  GRTLDLSSLGSYEELYRR 3
           GRTLDLS +GSYEELYR+
Sbjct: 656 GRTLDLSCVGSYEELYRK 673


>ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 711

 Score =  143 bits (360), Expect = 2e-32
 Identities = 84/155 (54%), Positives = 99/155 (63%), Gaps = 17/155 (10%)
 Frame = -1

Query: 416 HNGVSNGNITNHDKNRESLSCLLTIGKSDKSLEKSDDVNKKHQFLLFGQPILTEQQISRN 237
           H+ ++NG IT H KN ES+SCLLT+G S ++LEKS +  K  QFLLFGQPILTEQQ+SR 
Sbjct: 478 HSRITNGIITAHRKNNESISCLLTMGNSSQNLEKSAN-EKTPQFLLFGQPILTEQQMSRT 536

Query: 236 CSRDVFAHKDKEKCFLDDSSQCALSKQFSPGKACAAAE-----------FSWHQ------ 108
           CS D  +     K   D SS  A  K+ S G      +           FSWHQ      
Sbjct: 537 CSSDAVSQVLTGKSSSDGSSDKA--KKISDGLGSTLEQKGKPENLSNVGFSWHQGFQTTE 594

Query: 107 LGLDTGHCKVFLESEDVGRTLDLSSLGSYEELYRR 3
           +GLDTGHCKVF+ESEDVGR+LDLS LGSYEELY R
Sbjct: 595 IGLDTGHCKVFMESEDVGRSLDLSVLGSYEELYTR 629