BLASTX nr result

ID: Glycyrrhiza24_contig00023539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023539
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607899.1| Xylogalacturonan beta-1,3-xylosyltransferase...   141   1e-31
gb|ABN04854.1| Exostosin-like [Medicago truncatula]                   141   1e-31
ref|XP_003528545.1| PREDICTED: probable beta-1,4-xylosyltransfer...   114   2e-23
ref|XP_003556667.1| PREDICTED: probable glucuronosyltransferase ...   111   1e-22
ref|XP_002276440.2| PREDICTED: probable glycosyltransferase At5g...    81   2e-13

>ref|XP_003607899.1| Xylogalacturonan beta-1,3-xylosyltransferase [Medicago truncatula]
           gi|355508954|gb|AES90096.1| Xylogalacturonan
           beta-1,3-xylosyltransferase [Medicago truncatula]
          Length = 481

 Score =  141 bits (355), Expect = 1e-31
 Identities = 74/113 (65%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
 Frame = -3

Query: 338 TSQTQFSAMSRKPVVQRTLATFVLVLALYALFIAFFRPTDYSAFDSATFPLYTATGSSVL 159
           T QT FS M+RKPV ++TL  F ++L LYALF  FF+PTD S FDS+TF   +AT SSVL
Sbjct: 23  TFQTLFSTMTRKPVFKQTLIIFFVLLLLYALFNTFFQPTDSSTFDSSTFSFNSAT-SSVL 81

Query: 158 LASGASKSPAVKVYLYDLPHRFTHGIIQHHSLARGG-SRVKENDVSSLKYPGH 3
           L+S ASKSPAVKVYLYDLP RFT+G+I HHSLARG  +   E DV+S KYPGH
Sbjct: 82  LSSAASKSPAVKVYLYDLPKRFTYGVIHHHSLARGSRANTDEKDVTSFKYPGH 134


>gb|ABN04854.1| Exostosin-like [Medicago truncatula]
          Length = 303

 Score =  141 bits (355), Expect = 1e-31
 Identities = 74/113 (65%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
 Frame = -3

Query: 338 TSQTQFSAMSRKPVVQRTLATFVLVLALYALFIAFFRPTDYSAFDSATFPLYTATGSSVL 159
           T QT FS M+RKPV ++TL  F ++L LYALF  FF+PTD S FDS+TF   +AT SSVL
Sbjct: 23  TFQTLFSTMTRKPVFKQTLIIFFVLLLLYALFNTFFQPTDSSTFDSSTFSFNSAT-SSVL 81

Query: 158 LASGASKSPAVKVYLYDLPHRFTHGIIQHHSLARGG-SRVKENDVSSLKYPGH 3
           L+S ASKSPAVKVYLYDLP RFT+G+I HHSLARG  +   E DV+S KYPGH
Sbjct: 82  LSSAASKSPAVKVYLYDLPKRFTYGVIHHHSLARGSRANTDEKDVTSFKYPGH 134


>ref|XP_003528545.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX10L-like
           [Glycine max]
          Length = 452

 Score =  114 bits (285), Expect = 2e-23
 Identities = 61/107 (57%), Positives = 82/107 (76%), Gaps = 3/107 (2%)
 Frame = -3

Query: 314 MSRKPVVQRTLATFVLVLALYALFIAFFRPTDYSAFDSA-TFPLYTATGSSVLLASGASK 138
           M+RKP++++TLAT  L+  LYA+F AFF+PTD SAFD+A TF    ++ SSVLL+   +K
Sbjct: 1   MARKPLLKQTLATLFLLFVLYAIFNAFFQPTDSSAFDAAATF----SSASSVLLSGATTK 56

Query: 137 SPAVKVYLYDLPHRFTHGIIQHHSLARGG-SRV-KENDVSSLKYPGH 3
           SPA+ V+LYDLP RFT  +I HH+LARGG SRV  ++D ++ KYPGH
Sbjct: 57  SPAINVFLYDLPRRFTSDVIHHHALARGGASRVTPDDDAAAPKYPGH 103


>ref|XP_003556667.1| PREDICTED: probable glucuronosyltransferase Os02g0520750-like
           [Glycine max]
          Length = 459

 Score =  111 bits (278), Expect = 1e-22
 Identities = 63/113 (55%), Positives = 81/113 (71%), Gaps = 9/113 (7%)
 Frame = -3

Query: 314 MSRKPVVQRTLATFVLVLALYALFIAFFRPTDYSAFDSA-TFPLYTATGSSVLLASGASK 138
           M+RKP++++TLAT  L   LYA+F AFF PTD SAFD+A TF    ++ SSVLL++G +K
Sbjct: 1   MARKPLLKQTLATLFLFFVLYAIFNAFFHPTDSSAFDAAATF----SSASSVLLSAGTTK 56

Query: 137 SPAVKVYLYDLPHRFTHGIIQHHSLARG-------GSRVKENDVS-SLKYPGH 3
           S  VKV+LYDLP RFT G+I HH+LARG        SR   +DV+ +LKYPGH
Sbjct: 57  SLYVKVFLYDLPRRFTSGVIHHHTLARGSGGVGGSASRATPDDVADALKYPGH 109


>ref|XP_002276440.2| PREDICTED: probable glycosyltransferase At5g11130-like [Vitis
           vinifera] gi|147815974|emb|CAN68074.1| hypothetical
           protein VITISV_007510 [Vitis vinifera]
           gi|297737986|emb|CBI27187.3| unnamed protein product
           [Vitis vinifera]
          Length = 461

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 45/114 (39%), Positives = 73/114 (64%), Gaps = 10/114 (8%)
 Frame = -3

Query: 314 MSRKPVVQRTLATFVLVLALYALFIAFFRPTD-YSAFDSATFPLYTATGSSVLLASGASK 138
           M+RK +++ T+ T + V  LY L   FF P + Y +    + PL +++ S  LL++ + +
Sbjct: 1   MARKSILKSTVVTVLCVFGLYGLSTTFFNPINPYHSRLDLSLPLDSSSKSLSLLSTDSGE 60

Query: 137 SPA--------VKVYLYDLPHRFTHGIIQHHSLARGG-SRVKENDVSSLKYPGH 3
           + +        VKVY+YDLP +FT+G+I+ +++ARGG  +V  +DVSSLKYPGH
Sbjct: 61  NLSKFSRNFGPVKVYMYDLPRKFTYGVIESYAVARGGLEKVPVDDVSSLKYPGH 114


Top