BLASTX nr result

ID: Glycyrrhiza24_contig00023534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023534
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519796.1| PREDICTED: metalloendoproteinase 1-like [Gly...    88   6e-16
ref|XP_003517862.1| PREDICTED: metalloendoproteinase 1-like [Gly...    80   2e-13
ref|XP_003613416.1| Matrix metalloproteinase-9 [Medicago truncat...    80   2e-13
ref|XP_003628627.1| Matrix metalloproteinase-9 [Medicago truncat...    70   2e-10
ref|XP_003530663.1| PREDICTED: metalloendoproteinase 1-like [Gly...    68   9e-10

>ref|XP_003519796.1| PREDICTED: metalloendoproteinase 1-like [Glycine max]
          Length = 379

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/69 (63%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
 Frame = +2

Query: 68  LFALAIVTSTLSITFPSVSARFFPNASSIPTDISKHAPQG-AWEAYRNFTGCRPGENYDG 244
           LFA   +    S     VSAR FPN SSIPT  S HAP G AW AYRNFTGCRPG+ Y+G
Sbjct: 10  LFAFTTLIVVFSFNTSPVSARLFPNVSSIPTWNSSHAPPGGAWNAYRNFTGCRPGKTYNG 69

Query: 245 LSNLKKYFQ 271
           LSNLK YFQ
Sbjct: 70  LSNLKNYFQ 78


>ref|XP_003517862.1| PREDICTED: metalloendoproteinase 1-like [Glycine max]
          Length = 379

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/68 (58%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = +2

Query: 68  LFALAIVTSTLSITFPSVSARFFPNASSIPTDISKHAP-QGAWEAYRNFTGCRPGENYDG 244
           LFA   +    S     VSAR FPN SSIP   + HAP   AW AYRNFTGCRPG+ Y+G
Sbjct: 11  LFAFTTLIVFFSFNTTPVSARLFPNVSSIPRWNTSHAPPDSAWNAYRNFTGCRPGKTYNG 70

Query: 245 LSNLKKYF 268
           LSNLK YF
Sbjct: 71  LSNLKNYF 78


>ref|XP_003613416.1| Matrix metalloproteinase-9 [Medicago truncatula]
           gi|355514751|gb|AES96374.1| Matrix metalloproteinase-9
           [Medicago truncatula]
          Length = 393

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/57 (63%), Positives = 43/57 (75%)
 Frame = +2

Query: 98  LSITFPSVSARFFPNASSIPTDISKHAPQGAWEAYRNFTGCRPGENYDGLSNLKKYF 268
           +SIT  SVSARFFP+ SS+P   S +AP GAW+ Y+NFTGC  G+ YDGLS LK YF
Sbjct: 18  ISITLTSVSARFFPDPSSMPAWNSSNAPPGAWDGYKNFTGCSRGKTYDGLSKLKNYF 74


>ref|XP_003628627.1| Matrix metalloproteinase-9 [Medicago truncatula]
           gi|355522649|gb|AET03103.1| Matrix metalloproteinase-9
           [Medicago truncatula]
          Length = 373

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/63 (57%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
 Frame = +2

Query: 86  VTSTLSITFPSVSARFFPNASS-IPTDISKHAPQGAWEAYRNFTGCRPGENYDGLSNLKK 262
           +T + S+T   VSAR FP+  S IP       P G W+A+RNFTGCR GENY+GLSNLK 
Sbjct: 10  LTISFSLTLLIVSARLFPDVPSWIPPGT---LPVGPWDAFRNFTGCRQGENYNGLSNLKN 66

Query: 263 YFQ 271
           YFQ
Sbjct: 67  YFQ 69


>ref|XP_003530663.1| PREDICTED: metalloendoproteinase 1-like [Glycine max]
          Length = 370

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = +2

Query: 95  TLSITFPSVSARFFPNASSIPTDISKHAPQG-AWEAYRNFTGCRPGENYDGLSNLKKYFQ 271
           +LS+T   VSAR FPN SS    ++ HAP G AW+A+ NFTGC  G+ YDGL+NLK YF+
Sbjct: 14  SLSLTNVVVSARLFPNVSSW---LNAHAPTGGAWDAFLNFTGCHRGDKYDGLANLKSYFE 70


Top