BLASTX nr result

ID: Glycyrrhiza24_contig00023529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023529
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago t...    87   1e-15
ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat...    86   3e-15
ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_003578281.1| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14
emb|CBI18084.3| unnamed protein product [Vitis vinifera]               81   8e-14

>ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355486292|gb|AES67495.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 678

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = +2

Query: 2   GDCHEAIKLISKVTGREIIIRDNNRFHCFSEGSCSCRDYW 121
           GDCHEAIK ISKVTGREI+IRDNNRFHCFS+G+CSCRDYW
Sbjct: 639 GDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678


>ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = +2

Query: 2   GDCHEAIKLISKVTGREIIIRDNNRFHCFSEGSCSCRDYW 121
           GDCHEAIKL+SKVTGREII+RDNNRFH F+EGSCSCRDYW
Sbjct: 637 GDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676


>ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|222855145|gb|EEE92692.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = +2

Query: 2   GDCHEAIKLISKVTGREIIIRDNNRFHCFSEGSCSCRDYW 121
           GDCHEAIK IS+ TGREII+RDNNRFHCF++GSCSC+DYW
Sbjct: 580 GDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619


>ref|XP_003578281.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Brachypodium distachyon]
          Length = 547

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = +2

Query: 2   GDCHEAIKLISKVTGREIIIRDNNRFHCFSEGSCSCRDYW 121
           GDCH AIKL+SK+ GR II+RD NRFHCFSEGSCSCRDYW
Sbjct: 508 GDCHNAIKLLSKIYGRSIIVRDANRFHCFSEGSCSCRDYW 547


>emb|CBI18084.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 33/40 (82%), Positives = 35/40 (87%)
 Frame = +2

Query: 2   GDCHEAIKLISKVTGREIIIRDNNRFHCFSEGSCSCRDYW 121
           GDCH AIKLIS +TGREI +RDNNRFHCF EGSCSC DYW
Sbjct: 457 GDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 496


Top