BLASTX nr result

ID: Glycyrrhiza24_contig00023516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023516
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521223.1| PREDICTED: gamma-tubulin complex component 3...   686   0.0  
ref|XP_003553435.1| PREDICTED: gamma-tubulin complex component 3...   678   0.0  
ref|XP_003625292.1| Gamma-tubulin complex component [Medicago tr...   678   0.0  
ref|XP_002309295.1| tubulin gamma complex-associated protein [Po...   649   0.0  
ref|XP_002532346.1| gamma-tubulin complex component, putative [R...   647   0.0  

>ref|XP_003521223.1| PREDICTED: gamma-tubulin complex component 3 homolog [Glycine max]
          Length = 844

 Score =  686 bits (1770), Expect = 0.0
 Identities = 341/383 (89%), Positives = 353/383 (92%)
 Frame = -1

Query: 1150 EYYKLLAVLEAQSSNPIPLVSESASSGNYLSLRRLAVWVAEPTVKMRLMGDLVDRCRVLR 971
            EYYKLLAVLEAQ+SNPIPLVSESASSGNYLSLRRLAVWVAEP VKMRLM DLV++CRVLR
Sbjct: 269  EYYKLLAVLEAQASNPIPLVSESASSGNYLSLRRLAVWVAEPLVKMRLMADLVEKCRVLR 328

Query: 970  GGAMAGAIHLHAQHGDPMVHEFMKRLLQRVCSPLFEMVKRWVLEGELEDIFAEFFIVGQP 791
            GGAMAGAIHLHAQHGDP+VHEFM+RLLQRVCS LFEMV+RWVLEGELEDIFAEFFIVGQP
Sbjct: 329  GGAMAGAIHLHAQHGDPLVHEFMRRLLQRVCSSLFEMVRRWVLEGELEDIFAEFFIVGQP 388

Query: 790  VKAESLWREGYRLHDAMLPSFISASLAQRILRTGKSINFLRVCCEDHGWXXXXXXXXXXX 611
            VKAESLWREGYRLHD+MLP FIS SLAQRILRTGKSINFLRVCCEDHGW           
Sbjct: 389  VKAESLWREGYRLHDSMLPLFISPSLAQRILRTGKSINFLRVCCEDHGWADAATEVVADH 448

Query: 610  XXXXXXXGFGYGETDTLESLVDEAAKRIDKHLLDVIYNRYKFKEHCLAIKRYLLLGQGDF 431
                   GFGYGETDTLE LVDEA+KRIDKHLLDVI+ RYKFKEHCLAIK+YLLLGQGDF
Sbjct: 449  GATARRGGFGYGETDTLEFLVDEASKRIDKHLLDVIFKRYKFKEHCLAIKQYLLLGQGDF 508

Query: 430  VQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDR 251
            VQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDP+ILDRLRVKMMPHESGDR
Sbjct: 509  VQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPEILDRLRVKMMPHESGDR 568

Query: 250  GWDVFSLEYDARVPLDTVFTESVMVRYLRIFNFLWKLKRVEHALIGAWKTMKPNCITYKS 71
            GWDVFSLEYDARVPLDTVFTESVM RYLRIFNFLWKL+RVEHAL GAWKTMKPNCIT  S
Sbjct: 569  GWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLRRVEHALTGAWKTMKPNCITSNS 628

Query: 70   FTRLQDAVKMQLVSTLRRCQVLW 2
            FTRLQ AVKMQLVSTLRRCQVLW
Sbjct: 629  FTRLQHAVKMQLVSTLRRCQVLW 651


>ref|XP_003553435.1| PREDICTED: gamma-tubulin complex component 3 homolog [Glycine max]
          Length = 842

 Score =  678 bits (1750), Expect = 0.0
 Identities = 338/383 (88%), Positives = 350/383 (91%)
 Frame = -1

Query: 1150 EYYKLLAVLEAQSSNPIPLVSESASSGNYLSLRRLAVWVAEPTVKMRLMGDLVDRCRVLR 971
            EYYKLLAVLEAQ+SNPIPLVSESASS NYLSLRRLAVW+AEP VKMRLM DLV++CRVLR
Sbjct: 267  EYYKLLAVLEAQASNPIPLVSESASSRNYLSLRRLAVWLAEPLVKMRLMADLVEKCRVLR 326

Query: 970  GGAMAGAIHLHAQHGDPMVHEFMKRLLQRVCSPLFEMVKRWVLEGELEDIFAEFFIVGQP 791
            GGAM GAIHLHAQHGDP+VHEFM+RLLQRVCS LFEMV+RWVLEGELEDIFAEFFIVG+P
Sbjct: 327  GGAMVGAIHLHAQHGDPLVHEFMRRLLQRVCSSLFEMVRRWVLEGELEDIFAEFFIVGRP 386

Query: 790  VKAESLWREGYRLHDAMLPSFISASLAQRILRTGKSINFLRVCCEDHGWXXXXXXXXXXX 611
            VKAESLWREGYRLHDAMLP FIS SLAQRILRTGKSINFLRVCCED GW           
Sbjct: 387  VKAESLWREGYRLHDAMLPLFISPSLAQRILRTGKSINFLRVCCEDRGWADAATEVVADH 446

Query: 610  XXXXXXXGFGYGETDTLESLVDEAAKRIDKHLLDVIYNRYKFKEHCLAIKRYLLLGQGDF 431
                   GFGYGETDTLE LVDEA+KRIDKHLLDVI+ RYKFKEHCLAIK+YLLLGQGDF
Sbjct: 447  GTMARRGGFGYGETDTLEFLVDEASKRIDKHLLDVIFKRYKFKEHCLAIKQYLLLGQGDF 506

Query: 430  VQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDR 251
            VQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDR
Sbjct: 507  VQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDR 566

Query: 250  GWDVFSLEYDARVPLDTVFTESVMVRYLRIFNFLWKLKRVEHALIGAWKTMKPNCITYKS 71
            GWDVFSLEYDARVPLDTVFTESVM RYLRIFNFLWKL+RVEHAL GAWKTMKPNCIT  S
Sbjct: 567  GWDVFSLEYDARVPLDTVFTESVMTRYLRIFNFLWKLRRVEHALTGAWKTMKPNCITSNS 626

Query: 70   FTRLQDAVKMQLVSTLRRCQVLW 2
            FTRLQ AVKMQLVSTLRRCQVLW
Sbjct: 627  FTRLQHAVKMQLVSTLRRCQVLW 649


>ref|XP_003625292.1| Gamma-tubulin complex component [Medicago truncatula]
            gi|355500307|gb|AES81510.1| Gamma-tubulin complex
            component [Medicago truncatula]
          Length = 841

 Score =  678 bits (1750), Expect = 0.0
 Identities = 338/383 (88%), Positives = 350/383 (91%)
 Frame = -1

Query: 1150 EYYKLLAVLEAQSSNPIPLVSESASSGNYLSLRRLAVWVAEPTVKMRLMGDLVDRCRVLR 971
            +YYKLLAVLEAQSSNPIPL+SE  SSGNYLSLRRLAVW+AEP VKM+LM DLV++CRVLR
Sbjct: 273  DYYKLLAVLEAQSSNPIPLLSEGVSSGNYLSLRRLAVWLAEPMVKMKLMADLVEKCRVLR 332

Query: 970  GGAMAGAIHLHAQHGDPMVHEFMKRLLQRVCSPLFEMVKRWVLEGELEDIFAEFFIVGQP 791
            GGAMAGAIHLHA+HGDPMVHEFMKRLL+RVCSPLFEMVKRWVLEGELEDIF EFFIVGQP
Sbjct: 333  GGAMAGAIHLHARHGDPMVHEFMKRLLRRVCSPLFEMVKRWVLEGELEDIFVEFFIVGQP 392

Query: 790  VKAESLWREGYRLHDAMLPSFISASLAQRILRTGKSINFLRVCCEDHGWXXXXXXXXXXX 611
            VKAESLWREGYRL+DAMLPSFISASLAQRILRTGKSINFLRVCCED GW           
Sbjct: 393  VKAESLWREGYRLYDAMLPSFISASLAQRILRTGKSINFLRVCCEDRGWARAATEDTGAM 452

Query: 610  XXXXXXXGFGYGETDTLESLVDEAAKRIDKHLLDVIYNRYKFKEHCLAIKRYLLLGQGDF 431
                    FGYGETDTLESLVDEA+KRIDKHLLDVIY RYKFKEHCLAIKRYLLLGQGDF
Sbjct: 453  ARRGG---FGYGETDTLESLVDEASKRIDKHLLDVIYERYKFKEHCLAIKRYLLLGQGDF 509

Query: 430  VQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDR 251
            VQYLMDIVGPELS PANTISSFKL+GLLETAIRASNAQYDDPDILDRLRVKMMPHESGDR
Sbjct: 510  VQYLMDIVGPELSVPANTISSFKLAGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDR 569

Query: 250  GWDVFSLEYDARVPLDTVFTESVMVRYLRIFNFLWKLKRVEHALIGAWKTMKPNCITYKS 71
            GWDVFSLEYDARVPLDTVFTESVM RYLRIFNFLWKLKRVEHALIGAWKTMKPNCIT  +
Sbjct: 570  GWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLKRVEHALIGAWKTMKPNCITSNT 629

Query: 70   FTRLQDAVKMQLVSTLRRCQVLW 2
            F RLQ AVKMQLVS LRRCQVLW
Sbjct: 630  FNRLQHAVKMQLVSALRRCQVLW 652


>ref|XP_002309295.1| tubulin gamma complex-associated protein [Populus trichocarpa]
            gi|222855271|gb|EEE92818.1| tubulin gamma
            complex-associated protein [Populus trichocarpa]
          Length = 860

 Score =  649 bits (1673), Expect = 0.0
 Identities = 319/383 (83%), Positives = 341/383 (89%)
 Frame = -1

Query: 1150 EYYKLLAVLEAQSSNPIPLVSESASSGNYLSLRRLAVWVAEPTVKMRLMGDLVDRCRVLR 971
            +YYKLLAVLEAQ+ NPIPLVS+S SS NYLSLRRL+VW AEPTVKMRLM  LVD+CRVLR
Sbjct: 287  DYYKLLAVLEAQAMNPIPLVSKSTSSSNYLSLRRLSVWFAEPTVKMRLMAVLVDKCRVLR 346

Query: 970  GGAMAGAIHLHAQHGDPMVHEFMKRLLQRVCSPLFEMVKRWVLEGELEDIFAEFFIVGQP 791
            GGAMAGAIHLHAQHGDP+VHEFM+ LLQ VCSPLFEMV+ WVLEGELEDIFAEFF+VGQP
Sbjct: 347  GGAMAGAIHLHAQHGDPLVHEFMRSLLQHVCSPLFEMVRSWVLEGELEDIFAEFFVVGQP 406

Query: 790  VKAESLWREGYRLHDAMLPSFISASLAQRILRTGKSINFLRVCCEDHGWXXXXXXXXXXX 611
            VKAESLWREGYRLH  MLPSFIS  LAQRILRTGKSINFLRVCC+D GW           
Sbjct: 407  VKAESLWREGYRLHAGMLPSFISQPLAQRILRTGKSINFLRVCCDDRGWADTATEAAAAA 466

Query: 610  XXXXXXXGFGYGETDTLESLVDEAAKRIDKHLLDVIYNRYKFKEHCLAIKRYLLLGQGDF 431
                     GYGETD LE+LV EAAKRIDKHLLDVIY RYKFKEHCLAIKRYLLLGQGDF
Sbjct: 467  GTTTRRGSLGYGETDALETLVVEAAKRIDKHLLDVIYTRYKFKEHCLAIKRYLLLGQGDF 526

Query: 430  VQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDR 251
            VQYLMDIVG ELSEPANTISSF+L+GLLE+AIR+SNAQYDDPDILDRLRVKM+PH +GDR
Sbjct: 527  VQYLMDIVGQELSEPANTISSFQLAGLLESAIRSSNAQYDDPDILDRLRVKMLPHGTGDR 586

Query: 250  GWDVFSLEYDARVPLDTVFTESVMVRYLRIFNFLWKLKRVEHALIGAWKTMKPNCITYKS 71
            GWDVFSLEYDARVPLDTVFTESVM RYLRIFNFLWKL+RVEHALIGAWKTMKPNCIT  S
Sbjct: 587  GWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLRRVEHALIGAWKTMKPNCITSHS 646

Query: 70   FTRLQDAVKMQLVSTLRRCQVLW 2
            FT+LQDAVK+QL+STLR+CQVLW
Sbjct: 647  FTKLQDAVKLQLLSTLRQCQVLW 669


>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
            gi|223527963|gb|EEF30048.1| gamma-tubulin complex
            component, putative [Ricinus communis]
          Length = 855

 Score =  647 bits (1669), Expect = 0.0
 Identities = 318/383 (83%), Positives = 339/383 (88%)
 Frame = -1

Query: 1150 EYYKLLAVLEAQSSNPIPLVSESASSGNYLSLRRLAVWVAEPTVKMRLMGDLVDRCRVLR 971
            EYYKLLAVLEAQS NPIPL+SE ASS NYLSLRRL+VW AEP VKMRLM  LVD+CRVLR
Sbjct: 282  EYYKLLAVLEAQSMNPIPLISEMASSSNYLSLRRLSVWFAEPMVKMRLMAVLVDKCRVLR 341

Query: 970  GGAMAGAIHLHAQHGDPMVHEFMKRLLQRVCSPLFEMVKRWVLEGELEDIFAEFFIVGQP 791
            GGAMAGAIHLHAQHGDP+VHEFM+ LLQRVCSPLFEMV+ WVLEGELED+FAEFF+VGQP
Sbjct: 342  GGAMAGAIHLHAQHGDPLVHEFMRNLLQRVCSPLFEMVRSWVLEGELEDLFAEFFVVGQP 401

Query: 790  VKAESLWREGYRLHDAMLPSFISASLAQRILRTGKSINFLRVCCEDHGWXXXXXXXXXXX 611
            VKAESLWREGYRLH  MLPSFIS SLAQRILRTGKSINFLRVCC+D GW           
Sbjct: 402  VKAESLWREGYRLHAGMLPSFISPSLAQRILRTGKSINFLRVCCDDRGWADTATEAATAA 461

Query: 610  XXXXXXXGFGYGETDTLESLVDEAAKRIDKHLLDVIYNRYKFKEHCLAIKRYLLLGQGDF 431
                     GYGETD LE+LV EAAKR DKHLLDV+Y  YKFKEHCLAIKRYLLLGQGDF
Sbjct: 462  GTTTRRGSLGYGETDALETLVVEAAKRTDKHLLDVMYKTYKFKEHCLAIKRYLLLGQGDF 521

Query: 430  VQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDR 251
            VQYLMDIVGPELSEPANTISSFKL+GLLE+AIR+SNAQYDDPDILDRLRVKMMPH +GDR
Sbjct: 522  VQYLMDIVGPELSEPANTISSFKLAGLLESAIRSSNAQYDDPDILDRLRVKMMPHGTGDR 581

Query: 250  GWDVFSLEYDARVPLDTVFTESVMVRYLRIFNFLWKLKRVEHALIGAWKTMKPNCITYKS 71
            GWDVFSLEYDARVPLDTVFT+SVM RYLRIFNFLWKL+RVEHALIGAWKTMKPNCIT  +
Sbjct: 582  GWDVFSLEYDARVPLDTVFTKSVMARYLRIFNFLWKLRRVEHALIGAWKTMKPNCITSHA 641

Query: 70   FTRLQDAVKMQLVSTLRRCQVLW 2
            F +LQ AVK+QL+STLRRCQVLW
Sbjct: 642  FIKLQGAVKLQLLSTLRRCQVLW 664


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