BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023489
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I sub...   156   1e-36
ref|XP_003518107.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   146   2e-33
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...   128   4e-28
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              123   2e-26
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   123   2e-26

>ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
           max]
          Length = 1653

 Score =  156 bits (395), Expect = 1e-36
 Identities = 73/95 (76%), Positives = 83/95 (87%)
 Frame = -1

Query: 287 LGPLDEKSPCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSIILQRTCFSCHHFQATR 108
           LGP D+KS CKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILS ILQRTCF+CHHF+A  
Sbjct: 55  LGPFDDKSLCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPS 114

Query: 107 HDVEMRTSQLELIMKGNITRAKNLDSAKPEEFMDS 3
            +V++RTSQLELIMKG+I RAK L+S  P + +DS
Sbjct: 115 KEVDIRTSQLELIMKGDIIRAKRLESIIPGKSVDS 149


>ref|XP_003518107.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
           subunit RPA190-like [Glycine max]
          Length = 1568

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/94 (72%), Positives = 79/94 (84%)
 Frame = -1

Query: 287 LGPLDEKSPCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSIILQRTCFSCHHFQATR 108
           +GPLD+KS CKSCGQT+KHCP HFGHIELVSPVYNPL FNI S ILQRTCFSCHHFQ+ R
Sbjct: 99  MGPLDDKSLCKSCGQTTKHCPDHFGHIELVSPVYNPLTFNIPSNILQRTCFSCHHFQSLR 158

Query: 107 HDVEMRTSQLELIMKGNITRAKNLDSAKPEEFMD 6
            +V++R  QLELIMKG+I  AKNL+S   E+ +D
Sbjct: 159 KEVDIRAFQLELIMKGDIIMAKNLESIITEKSVD 192


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 1628

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = -1

Query: 284 GPL-DEKSPCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSIILQRTCFSCHHFQATR 108
           GPL D +S C+SCG +  HC GHFGHIELVSPVYNPLMF  L  IL RTCFSCH+F+A+R
Sbjct: 56  GPLLDNRSNCESCGMSKDHCSGHFGHIELVSPVYNPLMFLFLGKILNRTCFSCHYFRASR 115

Query: 107 HDVEMRTSQLELIMKGNITRAKNLDSAKPEEFMDS 3
            +V+ R SQLELI+KGNI++AK+L   K  E +DS
Sbjct: 116 DEVKRRASQLELILKGNISKAKSLGEIKLNETIDS 150


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/91 (60%), Positives = 69/91 (75%)
 Frame = -1

Query: 287 LGPLDEKSPCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSIILQRTCFSCHHFQATR 108
           LG +DE +PC+SCGQ S +CPGH GHI+LVS VYNPL+FN+L  +LQ+TCF CHHF+ + 
Sbjct: 55  LGSIDENTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSS 114

Query: 107 HDVEMRTSQLELIMKGNITRAKNLDSAKPEE 15
             V+   SQLELI KG++  AKNLDS  P E
Sbjct: 115 SLVQKYVSQLELISKGDVVGAKNLDSISPSE 145


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
           vinifera]
          Length = 1740

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/91 (60%), Positives = 69/91 (75%)
 Frame = -1

Query: 287 LGPLDEKSPCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSIILQRTCFSCHHFQATR 108
           LG +DE +PC+SCGQ S +CPGH GHI+LVS VYNPL+FN+L  +LQ+TCF CHHF+ + 
Sbjct: 104 LGSIDENTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSS 163

Query: 107 HDVEMRTSQLELIMKGNITRAKNLDSAKPEE 15
             V+   SQLELI KG++  AKNLDS  P E
Sbjct: 164 SLVQKYVSQLELISKGDVVGAKNLDSISPSE 194