BLASTX nr result

ID: Glycyrrhiza24_contig00023487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023487
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534142.1| PREDICTED: zinc finger protein VAR3, chlorop...   332   7e-89
ref|XP_003528977.1| PREDICTED: zinc finger protein VAR3, chlorop...   326   6e-87
ref|XP_003619821.1| E3 SUMO-protein ligase RanBP2 [Medicago trun...   325   1e-86
ref|XP_002318517.1| predicted protein [Populus trichocarpa] gi|2...   236   5e-60
ref|XP_002321514.1| predicted protein [Populus trichocarpa] gi|2...   231   2e-58

>ref|XP_003534142.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Glycine
           max]
          Length = 458

 Score =  332 bits (852), Expect = 7e-89
 Identities = 158/259 (61%), Positives = 171/259 (66%), Gaps = 10/259 (3%)
 Frame = +2

Query: 2   VISRGEKPLGREVIESSARKXXXXXXXXXXXXXXXXXXXXXK---------GQPRSSTTN 154
           V+S G+KP GREVIESSARK                     K         GQ  S TTN
Sbjct: 202 VLSGGDKPPGREVIESSARKLLSQLIELSESPAPAPASARSKPTAQDAVGEGQSLSVTTN 261

Query: 155 KLSKDVEMKKGDWMCPKCNFMNFSRNMQCLNCXXXXXXXXXXXXXXXXXGDWLCPECDFL 334
           +L KD EMKKGDWMCPKCNFMNFSRN QCLNC                 GDW CPEC+FL
Sbjct: 262 QLFKDAEMKKGDWMCPKCNFMNFSRNTQCLNCNEDRHKDINPSTVQMKPGDWTCPECNFL 321

Query: 335 NFSRNVRCLKCKTEGP-KRVNKDEVQMKKGDWTCPQCGFMNFASNVKCLRCPEPRPTKNP 511
           NF+RN RCLKCKT GP K  N +EV+ KKGDWTCPQCGFMN+A N KCLRCPE RP K+P
Sbjct: 322 NFARNTRCLKCKTAGPTKEANTNEVERKKGDWTCPQCGFMNYARNTKCLRCPETRPKKHP 381

Query: 512 GDWSCPKCEFMNFSGKVKCLRCLEXXXXXXXKKYPGDWSCPKCDFYNYARNMTCLKCNTE 691
           GDW+CP C FMNF  K+KCL C E       KKY GDWSCPKCDFYNYARNM CLKCNTE
Sbjct: 382 GDWNCPGCGFMNFGSKMKCLHCQE--PNPSSKKYNGDWSCPKCDFYNYARNMACLKCNTE 439

Query: 692 RSKEQPINEYEEHIWRRPN 748
           R KEQP  +Y+ H WRR N
Sbjct: 440 RPKEQPTVDYDGHEWRRSN 458


>ref|XP_003528977.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Glycine
           max]
          Length = 462

 Score =  326 bits (835), Expect = 6e-87
 Identities = 155/259 (59%), Positives = 170/259 (65%), Gaps = 10/259 (3%)
 Frame = +2

Query: 2   VISRGEKPLGREVIESSARKXXXXXXXXXXXXXXXXXXXXXK---------GQPRSSTTN 154
           V+S G+KP GREVIESS RK                     K         GQ  S TTN
Sbjct: 206 VLSGGDKPPGREVIESSVRKLLSQLIELSESPAPAPAPARSKPTAQDGVVEGQSLSVTTN 265

Query: 155 KLSKDVEMKKGDWMCPKCNFMNFSRNMQCLNCXXXXXXXXXXXXXXXXXGDWLCPECDFL 334
           +L KDVEMKKGDWMCPKCNFMNFSRN QCLNC                 GDW CPEC++L
Sbjct: 266 QLFKDVEMKKGDWMCPKCNFMNFSRNTQCLNCKEDKPKDINPFTVQMKPGDWTCPECNYL 325

Query: 335 NFSRNVRCLKCKTEGP-KRVNKDEVQMKKGDWTCPQCGFMNFASNVKCLRCPEPRPTKNP 511
           NF+RN  CL+CK EGP K  N  EV+ KKGDWTCPQCGFMN+A N KCLRCPE RP K+P
Sbjct: 326 NFARNRLCLECKIEGPAKEANTIEVERKKGDWTCPQCGFMNYARNTKCLRCPETRPKKHP 385

Query: 512 GDWSCPKCEFMNFSGKVKCLRCLEXXXXXXXKKYPGDWSCPKCDFYNYARNMTCLKCNTE 691
           GDW+CP C FMNF+ K+KCL C E       KKY GDWSCPKCDFYNYARNM CLKCN E
Sbjct: 386 GDWNCPGCGFMNFASKMKCLHCQE--PNPSSKKYSGDWSCPKCDFYNYARNMACLKCNAE 443

Query: 692 RSKEQPINEYEEHIWRRPN 748
           R KEQP  +YE+H WRR N
Sbjct: 444 RPKEQPTVDYEDHEWRRSN 462


>ref|XP_003619821.1| E3 SUMO-protein ligase RanBP2 [Medicago truncatula]
            gi|355494836|gb|AES76039.1| E3 SUMO-protein ligase RanBP2
            [Medicago truncatula]
          Length = 470

 Score =  325 bits (833), Expect = 1e-86
 Identities = 157/273 (57%), Positives = 174/273 (63%), Gaps = 24/273 (8%)
 Frame = +2

Query: 2    VISRGEKPLGREVIESSARKXXXXXXXXXXXXXXXXXXXXXKGQPRSSTTNK-------- 157
            V+S GEKP GREVIESSARK                              +K        
Sbjct: 198  VLSGGEKPPGREVIESSARKLLSQLIELSEWSPPPPPLPAYSKSTSQKDVSKVKPLSFKA 257

Query: 158  ---LSKDVEMKKGDWMCPKCNFMNFSRNMQCLNCXXXXXXXXXXXXXXXXXGDWLCPECD 328
               LSK+VEMKKGDW+C KCNFMNFSRN +CLNC                 GDW+C EC+
Sbjct: 258  AEMLSKNVEMKKGDWVCQKCNFMNFSRNRKCLNCEEDGPKSDDPRTFEMKEGDWICTECN 317

Query: 329  FLNFSRNVRCLKCKTEGPKRVNK---DEVQMKKGDWTCPQCGFMNFASNVKCLRCPEPRP 499
            F+NFSRN+ CL+CKTEGPKRVN+   +EVQMKKGDWTCPQCGFMNFASNVKC +CPEPRP
Sbjct: 318  FMNFSRNITCLECKTEGPKRVNRLDTNEVQMKKGDWTCPQCGFMNFASNVKCFKCPEPRP 377

Query: 500  TKNPGDWSCPKCEFMNFSGKVKCLRCLE----------XXXXXXXKKYPGDWSCPKCDFY 649
             K+PGDWSCPKC+FMNF+ K KC RC E                 KKYPGDWSCPKCDFY
Sbjct: 378  KKHPGDWSCPKCDFMNFASKDKCFRCQESNPNPNKYPGEWPNPNSKKYPGDWSCPKCDFY 437

Query: 650  NYARNMTCLKCNTERSKEQPINEYEEHIWRRPN 748
            NYARN TCLKCN + SKEQ  N  E HIWRR N
Sbjct: 438  NYARNTTCLKCNAKPSKEQQTNVDEGHIWRRRN 470


>ref|XP_002318517.1| predicted protein [Populus trichocarpa] gi|222859190|gb|EEE96737.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  236 bits (603), Expect = 5e-60
 Identities = 96/192 (50%), Positives = 130/192 (67%)
 Frame = +2

Query: 170 VEMKKGDWMCPKCNFMNFSRNMQCLNCXXXXXXXXXXXXXXXXXGDWLCPECDFLNFSRN 349
           +E+KKGDW+C +CNF NF++N +C  C                 GDW+C EC+FLNFSRN
Sbjct: 350 IEVKKGDWICSECNFTNFAKNTRCRKCGEQSAKKDGDDSIEVKKGDWICSECEFLNFSRN 409

Query: 350 VRCLKCKTEGPKRVNKDEVQMKKGDWTCPQCGFMNFASNVKCLRCPEPRPTKNPGDWSCP 529
           ++CLKCK +GP+RV  D V+MK+GDW C +CGFMNFASN  CLRC +PRP ++ G+W+CP
Sbjct: 410 IKCLKCKADGPERVAVDNVEMKRGDWNCTKCGFMNFASNKTCLRCLDPRPERDTGEWNCP 469

Query: 530 KCEFMNFSGKVKCLRCLEXXXXXXXKKYPGDWSCPKCDFYNYARNMTCLKCNTERSKEQP 709
            C+F+NF+    CL+C         K+  G+W CP CDF N++RN  CLKC+ +R +E  
Sbjct: 470 SCDFLNFTKNKVCLKC----NCDRPKRMGGEWHCPSCDFMNFSRNAVCLKCDCKRPRE-A 524

Query: 710 INEYEEHIWRRP 745
           + EYEE IW+ P
Sbjct: 525 MTEYEEQIWKSP 536



 Score =  199 bits (506), Expect = 9e-49
 Identities = 97/245 (39%), Positives = 127/245 (51%), Gaps = 18/245 (7%)
 Frame = +2

Query: 2   VISRGEKPLGREVIESSARKXXXXXXXXXXXXXXXXXXXXXKGQPRSS------TTNKLS 163
           VIS GEK  G E+IE+SARK                        P         T   L 
Sbjct: 210 VISEGEKSPGSELIEASARKLLSELVELSETPHDPALPKRTPKTPDKKERVVNFTGGILR 269

Query: 164 KDVEMKKGDWMCPKCNFMNFSRNMQCLNCXXXXXXXXXXXXXXXXXGDWLCPECDFLNFS 343
           ++VEMKKGDW+C KCNFMNF++N +C  C                 GDW+C EC+F+NF+
Sbjct: 270 ENVEMKKGDWICTKCNFMNFAKNKRCRKCGEQSAKKDGDDSIEVKKGDWICSECNFMNFA 329

Query: 344 RNVRCLKCKTEGPKRVNKDEVQMKKGDWTCPQCGFMNFASNVKCLRCPEPRPTKN----- 508
           +N RC KC  +  K+   D +++KKGDW C +C F NFA N +C +C E    K+     
Sbjct: 330 KNKRCRKCGEQSAKKDGDDSIEVKKGDWICSECNFTNFAKNTRCRKCGEQSAKKDGDDSI 389

Query: 509 ---PGDWSCPKCEFMNFSGKVKCLRCL----EXXXXXXXKKYPGDWSCPKCDFYNYARNM 667
               GDW C +CEF+NFS  +KCL+C     E       +   GDW+C KC F N+A N 
Sbjct: 390 EVKKGDWICSECEFLNFSRNIKCLKCKADGPERVAVDNVEMKRGDWNCTKCGFMNFASNK 449

Query: 668 TCLKC 682
           TCL+C
Sbjct: 450 TCLRC 454


>ref|XP_002321514.1| predicted protein [Populus trichocarpa] gi|222868510|gb|EEF05641.1|
           predicted protein [Populus trichocarpa]
          Length = 457

 Score =  231 bits (590), Expect = 2e-58
 Identities = 108/236 (45%), Positives = 138/236 (58%), Gaps = 9/236 (3%)
 Frame = +2

Query: 2   VISRGEKPLGREVIESSARKXXXXXXXXXXXXXXXXXXXXXKGQPRSS---------TTN 154
           VIS G+K  G E+IE+SARK                     K  P++S            
Sbjct: 217 VISGGQKSPGSELIETSARK---LLSELTELSETPQDPALPKHIPKASHKKERDVDFMDG 273

Query: 155 KLSKDVEMKKGDWMCPKCNFMNFSRNMQCLNCXXXXXXXXXXXXXXXXXGDWLCPECDFL 334
           +L  +VE KK DWMC KCNFMNFS+N +C  C                 GDW+C +C+F+
Sbjct: 274 QLCDNVETKKEDWMCTKCNFMNFSKNKRCQKCGEQSAKKDGDNNIEAKKGDWICSDCEFV 333

Query: 335 NFSRNVRCLKCKTEGPKRVNKDEVQMKKGDWTCPQCGFMNFASNVKCLRCPEPRPTKNPG 514
           NFSRN++CLKCK EGPKR   D+V+MKKGDW C  CGFMNFASN  CLRC +PRP +  G
Sbjct: 334 NFSRNIKCLKCKAEGPKRPGVDDVKMKKGDWNCNSCGFMNFASNKTCLRCRDPRPERKAG 393

Query: 515 DWSCPKCEFMNFSGKVKCLRCLEXXXXXXXKKYPGDWSCPKCDFYNYARNMTCLKC 682
           +W+CP C+F+NFS    CL+C         K+  G+W+CP CDF N++RN  C+KC
Sbjct: 394 EWNCPSCDFLNFSKNKVCLKC----NCVSPKRMAGEWNCPSCDFLNFSRNKDCIKC 445



 Score =  102 bits (253), Expect = 2e-19
 Identities = 46/115 (40%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
 Frame = +2

Query: 398 DEVQMKKGDWTCPQCGFMNFASNVKCLRCPEPRPTKN--------PGDWSCPKCEFMNFS 553
           D V+ KK DW C +C FMNF+ N +C +C E    K+         GDW C  CEF+NFS
Sbjct: 277 DNVETKKEDWMCTKCNFMNFSKNKRCQKCGEQSAKKDGDNNIEAKKGDWICSDCEFVNFS 336

Query: 554 GKVKCLRCL----EXXXXXXXKKYPGDWSCPKCDFYNYARNMTCLKCNTERSKEQ 706
             +KCL+C     +       K   GDW+C  C F N+A N TCL+C   R + +
Sbjct: 337 RNIKCLKCKAEGPKRPGVDDVKMKKGDWNCNSCGFMNFASNKTCLRCRDPRPERK 391



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 34/74 (45%), Positives = 42/74 (56%)
 Frame = +2

Query: 173 EMKKGDWMCPKCNFMNFSRNMQCLNCXXXXXXXXXXXXXXXXXGDWLCPECDFLNFSRNV 352
           E K G+W CP C+F+NFS+N  CL C                 G+W CP CDFLNFSRN 
Sbjct: 389 ERKAGEWNCPSCDFLNFSKNKVCLKCNCVSPKRMA--------GEWNCPSCDFLNFSRNK 440

Query: 353 RCLKCKTEGPKRVN 394
            C+KCK + P+  N
Sbjct: 441 DCIKCKCKAPQGSN 454



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
 Frame = +2

Query: 515 DWSCPKCEFMNFSGKVKCLRCLEXXXXXXX----KKYPGDWSCPKCDFYNYARNMTCLKC 682
           DW C KC FMNFS   +C +C E           +   GDW C  C+F N++RN+ CLKC
Sbjct: 285 DWMCTKCNFMNFSKNKRCQKCGEQSAKKDGDNNIEAKKGDWICSDCEFVNFSRNIKCLKC 344

Query: 683 NTERSKEQPINE 718
             E  K   +++
Sbjct: 345 KAEGPKRPGVDD 356


Top