BLASTX nr result

ID: Glycyrrhiza24_contig00023477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023477
         (1328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541694.1| PREDICTED: uncharacterized protein LOC100804...   293   5e-77
gb|ACU17331.1| unknown [Glycine max]                                  115   2e-23
ref|XP_002317043.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-08

>ref|XP_003541694.1| PREDICTED: uncharacterized protein LOC100804726 [Glycine max]
          Length = 332

 Score =  293 bits (751), Expect = 5e-77
 Identities = 164/299 (54%), Positives = 199/299 (66%), Gaps = 1/299 (0%)
 Frame = +2

Query: 350  SQHPFLELPQNGDFDSHFGVSLSTSSPCIASLGYETGNGNGVGSVGDASTFQKGKHAVVG 529
            S +PFLE P+  DFD  FG   S  S      G + G G+        S F KGKHAV G
Sbjct: 41   SGYPFLESPKEYDFDG-FGEDFSLPSYSPLCHGKQ-GEGDS-----HESLFHKGKHAVDG 93

Query: 530  LNPCLRVSDGTFEKSTGTIVPKDILSNSEGTIQAVDESNSFLISSSKVAPLKLS-TDMSS 706
            ++PC   +       T TIV +D+ SNS+G + + +ES S  +S+ KV+PLKL  T++ S
Sbjct: 94   VSPCPESA------GTSTIVAEDLPSNSKGLMHSANESISVPLSNFKVSPLKLPITELPS 147

Query: 707  LKNTPQNQFSNNLDDSETDVDSPCWKGTKTFNLTPSEILGSVQFHHVEKATEKSNSLNPL 886
             KNT QNQ S NL +S++DVDSPCWKGT  F LTP E  GS+Q  +VEKATEK NSLNPL
Sbjct: 148  AKNTSQNQSSKNLGESDSDVDSPCWKGTMAFCLTPIENSGSIQISNVEKATEKHNSLNPL 207

Query: 887  APQFFPGIGYITDDFXXXXXXXXXXXXXXXGEDMLMKTIMEESLVELNKGAELQHCSNIC 1066
            APQFFPGIGY+ DDF               GEDML+KT+M ES VE  KG ELQ  SN C
Sbjct: 208  APQFFPGIGYVKDDFGSSISCTPVATNLLSGEDMLIKTVMAESPVEPRKGIELQSSSNTC 267

Query: 1067 GREKAFNVLNDPKSSSVDPVLNSHCTMTQSSSKEECMTSKGKLVTIGDIDDFVKGTKNS 1243
            GREKAFN+ N+PK+SSVDPVLN HC +TQSSSKE+C  S GKL T+ D+D+FVKGTK+S
Sbjct: 268  GREKAFNMFNNPKNSSVDPVLNLHCMVTQSSSKEDCSISNGKLETVVDVDNFVKGTKDS 326


>gb|ACU17331.1| unknown [Glycine max]
          Length = 186

 Score =  115 bits (289), Expect = 2e-23
 Identities = 73/157 (46%), Positives = 94/157 (59%), Gaps = 1/157 (0%)
 Frame = +2

Query: 350 SQHPFLELPQNGDFDSHFGVSLSTSSPCIASLGYETGNGNGVGSVGDASTFQKGKHAVVG 529
           S +PFLE P+  DFD  FG   S  S      G + G G+        S F KGKHAV G
Sbjct: 41  SGYPFLESPKEYDFDG-FGEDFSLPSYSPLCHGKQ-GEGDS-----HESLFHKGKHAVDG 93

Query: 530 LNPCLRVSDGTFEKSTGTIVPKDILSNSEGTIQAVDESNSFLISSSKVAPLKLS-TDMSS 706
           ++PC   +       T TIV +D+ SNS+G + + +ES S  +S+ KV+PLKL  T++ S
Sbjct: 94  VSPCPESA------GTSTIVAEDLPSNSKGLMHSANESISVPLSNFKVSPLKLPITELPS 147

Query: 707 LKNTPQNQFSNNLDDSETDVDSPCWKGTKTFNLTPSE 817
            KNT QNQ S NL +S++DVDSPCWKGT  F LTP E
Sbjct: 148 AKNTSQNQSSKNLGESDSDVDSPCWKGTMAFCLTPIE 184


>ref|XP_002317043.1| predicted protein [Populus trichocarpa] gi|222860108|gb|EEE97655.1|
            predicted protein [Populus trichocarpa]
          Length = 724

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 64/255 (25%), Positives = 106/255 (41%), Gaps = 16/255 (6%)
 Frame = +2

Query: 584  IVPKDILSNSEGTIQAVDESNSFLISSSKVA----PLKLSTDMSSLKNT-PQNQFSNNLD 748
            +  K  +  S+   Q V E  S  +S  ++     P++L++    +K + P    S  ++
Sbjct: 323  LTDKSKVKMSKPATQEVMEPLSMTVSELQITCPSHPIELASKSLGVKESDPIGNSSEIIN 382

Query: 749  DSETDVDSPCWKGTKTFNLTPSEILGSVQFHHVEKATEKSNSLNPLAPQFFPGIGYIT-- 922
            ++++D+DSPCWKG  + N +  E+     F H++ A    ++LNPLAP F P  G     
Sbjct: 383  ENDSDLDSPCWKGKLSANQSTCEVSRPDDFQHLKSARGACSNLNPLAPHFVPSCGQQKVN 442

Query: 923  --------DDFXXXXXXXXXXXXXXXGEDMLMKTIMEESLVELNKGAELQHCS-NICGRE 1075
                    DD                 E  L K     S           HCS +   R 
Sbjct: 443  YRGTECEGDDSLTFQKTESSAVSLFSREHTLQKPGTAGSSSSDRSSITETHCSIDNHVRN 502

Query: 1076 KAFNVLNDPKSSSVDPVLNSHCTMTQSSSKEECMTSKGKLVTIGDIDDFVKGTKNSGASR 1255
            K +  L +  +SS   +L+S C + Q S  E+   S G+L+T   +    K  K++ ++ 
Sbjct: 503  KEYEPLTNSSTSS---MLSSSC-LVQPSIPEDYFISNGQLLTGKKVGGSGKDIKDAVSNG 558

Query: 1256 PMSEVFPAKGHSPTS 1300
              S    A  H  +S
Sbjct: 559  STSVSLLASEHVTSS 573


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