BLASTX nr result

ID: Glycyrrhiza24_contig00023470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023470
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531707.1| PREDICTED: peptide deformylase 1A, chloropla...   316   2e-84
gb|AFK38005.1| unknown [Medicago truncatula]                          307   1e-81
dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]                         306   2e-81
ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloropla...   300   1e-79
ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide defo...   298   5e-79

>ref|XP_003531707.1| PREDICTED: peptide deformylase 1A, chloroplastic-like [Glycine max]
          Length = 252

 Score =  316 bits (810), Expect = 2e-84
 Identities = 155/175 (88%), Positives = 165/175 (94%)
 Frame = -1

Query: 628 AQEVVPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKE 449
           AQ+V P+EIKSE+VQKIIDDMI+VMRKAPGVGLAAPQIGIP RIIVLEDTKEYISY  KE
Sbjct: 78  AQDVDPNEIKSERVQKIIDDMIQVMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYVSKE 137

Query: 448 EIKAQDRRPFDLLVIVNPKLEKKSKRTALFFEGCLSVDGFRAVVERYLDVEVTGLDRYGD 269
           E K QDRRPFDLLVI+NPKLEKK KRTALFFEGCLSVDGFRAVVER+LDVEVTGLDRYG 
Sbjct: 138 EAKTQDRRPFDLLVILNPKLEKKGKRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRYGA 197

Query: 268 PIKITASGWQARILQHECDHLDGIVYVDKMVPRTFRTVDNLDLPLAKGCPKLGPR 104
           PIKI ASGWQARILQHECDHLDG +YVDKM+PRTFRTVDN+DLPLA+GCPKLGPR
Sbjct: 198 PIKIIASGWQARILQHECDHLDGTLYVDKMLPRTFRTVDNMDLPLAQGCPKLGPR 252


>gb|AFK38005.1| unknown [Medicago truncatula]
          Length = 267

 Score =  307 bits (786), Expect = 1e-81
 Identities = 151/175 (86%), Positives = 164/175 (93%)
 Frame = -1

Query: 628 AQEVVPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKE 449
           AQEV PSEI S+KVQKIIDDMIRVMRKAPGVGLAAPQIG+ SRIIVLEDT+E+ISYAPKE
Sbjct: 93  AQEVDPSEIMSDKVQKIIDDMIRVMRKAPGVGLAAPQIGVSSRIIVLEDTEEFISYAPKE 152

Query: 448 EIKAQDRRPFDLLVIVNPKLEKKSKRTALFFEGCLSVDGFRAVVERYLDVEVTGLDRYGD 269
            +KAQDR PFDLLVI+NPKL+  SKRTALFFEGCLSVDGFRAVVER+LDVEVTGLDR G+
Sbjct: 153 VLKAQDRHPFDLLVILNPKLKSTSKRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRNGE 212

Query: 268 PIKITASGWQARILQHECDHLDGIVYVDKMVPRTFRTVDNLDLPLAKGCPKLGPR 104
            IKITASGWQARILQHECDHLDG +YVDKMVPRTFRTV+N+DLPLA+GCP LGPR
Sbjct: 213 QIKITASGWQARILQHECDHLDGTLYVDKMVPRTFRTVENMDLPLAQGCPNLGPR 267


>dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]
          Length = 274

 Score =  306 bits (784), Expect = 2e-81
 Identities = 148/175 (84%), Positives = 159/175 (90%)
 Frame = -1

Query: 628 AQEVVPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKE 449
           A+EV P EI SE++QKIIDDMI+ MR APGVGLAAPQIG+P RIIVLEDTKEYI YAPKE
Sbjct: 100 AREVDPEEIGSERIQKIIDDMIKAMRMAPGVGLAAPQIGVPLRIIVLEDTKEYIRYAPKE 159

Query: 448 EIKAQDRRPFDLLVIVNPKLEKKSKRTALFFEGCLSVDGFRAVVERYLDVEVTGLDRYGD 269
           E KAQDRRPFDLLVI+NPKLEKKS RTA FFEGCLSVDGFRAVVERYLDVEVTGL RYG 
Sbjct: 160 ETKAQDRRPFDLLVILNPKLEKKSNRTAFFFEGCLSVDGFRAVVERYLDVEVTGLSRYGQ 219

Query: 268 PIKITASGWQARILQHECDHLDGIVYVDKMVPRTFRTVDNLDLPLAKGCPKLGPR 104
           PIK+ ASGWQARILQHECDHLDG +YVDKMVPRTFRT++NLDLPLA+GCP LG R
Sbjct: 220 PIKVNASGWQARILQHECDHLDGTLYVDKMVPRTFRTIENLDLPLAEGCPNLGAR 274


>ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 1
           [Cucumis sativus]
          Length = 267

 Score =  300 bits (769), Expect = 1e-79
 Identities = 149/175 (85%), Positives = 158/175 (90%)
 Frame = -1

Query: 628 AQEVVPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKE 449
           A+EV P EI SEKVQKIIDDMI  MRKAPGVGLAAPQIGIP RIIVLEDTKEYISYAPKE
Sbjct: 93  AREVDPKEIGSEKVQKIIDDMILTMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKE 152

Query: 448 EIKAQDRRPFDLLVIVNPKLEKKSKRTALFFEGCLSVDGFRAVVERYLDVEVTGLDRYGD 269
           EIKAQDRR FDLLVI+NPKL+ KS +TALFFEGCLSVDGFRAVVERYLDVEV G DR G+
Sbjct: 153 EIKAQDRRSFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGN 212

Query: 268 PIKITASGWQARILQHECDHLDGIVYVDKMVPRTFRTVDNLDLPLAKGCPKLGPR 104
           PIK+ ASGWQARILQHECDHLDG +YVDKMVPRTFRT +NL LPLA+GCPKLG R
Sbjct: 213 PIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTTENLTLPLAEGCPKLGAR 267


>ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  298 bits (763), Expect = 5e-79
 Identities = 148/175 (84%), Positives = 157/175 (89%)
 Frame = -1

Query: 628 AQEVVPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKE 449
           A+EV P EI SEKV KIIDDMI  MRKAPGVGLAAPQIGIP RIIVLEDTKEYISYAPKE
Sbjct: 93  AREVDPKEIGSEKVXKIIDDMILTMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKE 152

Query: 448 EIKAQDRRPFDLLVIVNPKLEKKSKRTALFFEGCLSVDGFRAVVERYLDVEVTGLDRYGD 269
           EIKAQDRR FDLLVI+NPKL+ KS +TALFFEGCLSVDGFRAVVERYLDVEV G DR G+
Sbjct: 153 EIKAQDRRSFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGN 212

Query: 268 PIKITASGWQARILQHECDHLDGIVYVDKMVPRTFRTVDNLDLPLAKGCPKLGPR 104
           PIK+ ASGWQARILQHECDHLDG +YVDKMVPRTFRT +NL LPLA+GCPKLG R
Sbjct: 213 PIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTTENLTLPLAEGCPKLGAR 267


Top