BLASTX nr result

ID: Glycyrrhiza24_contig00023466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023466
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538947.1| PREDICTED: uncharacterized protein LOC100800...   204   6e-51
ref|XP_003607305.1| Chromodomain helicase DNA binding protein [M...   198   3e-49
ref|XP_003540620.1| PREDICTED: uncharacterized protein LOC100791...   170   1e-40
ref|XP_002513535.1| hypothetical protein RCOM_1578820 [Ricinus c...   105   3e-21
ref|XP_002274937.2| PREDICTED: uncharacterized protein LOC100260...    96   3e-18

>ref|XP_003538947.1| PREDICTED: uncharacterized protein LOC100800973 [Glycine max]
          Length = 1735

 Score =  204 bits (519), Expect = 6e-51
 Identities = 105/158 (66%), Positives = 120/158 (75%), Gaps = 15/158 (9%)
 Frame = +1

Query: 1    DLLGIDLHGRLYFDSCGYLLVSNSPDAVSLFNYYHRNDLHVVIDVLKSMDTLYGDILMAI 180
            DLLG+DL GRLYF+SCGYLLVSNS +A SLFNYYHRNDLHVVI+ LKSMD LY  ILMAI
Sbjct: 740  DLLGMDLDGRLYFNSCGYLLVSNSSEAGSLFNYYHRNDLHVVIEALKSMDPLYEGILMAI 799

Query: 181  CKHWDVPV---------------ESKLTGEYSAMHTSVAPFTSSETCMDKNQADDQRKLD 315
             KHWD+                   ++ GEYS MHT +APFT SETC+DKN+A+DQ KLD
Sbjct: 800  YKHWDISANLSVGDSVFSQSSCKNMQMKGEYSTMHTFLAPFT-SETCLDKNRANDQSKLD 858

Query: 316  ESSTIDCCTLHGQEFPKAGNRLDSMTTIESPCIASEGS 429
            E+STI  C   GQE+PKAGNRLDS TTIESPC+AS+GS
Sbjct: 859  ENSTIVGCMHLGQEYPKAGNRLDSTTTIESPCVASDGS 896


>ref|XP_003607305.1| Chromodomain helicase DNA binding protein [Medicago truncatula]
            gi|355508360|gb|AES89502.1| Chromodomain helicase DNA
            binding protein [Medicago truncatula]
          Length = 1573

 Score =  198 bits (504), Expect = 3e-49
 Identities = 102/161 (63%), Positives = 117/161 (72%), Gaps = 18/161 (11%)
 Frame = +1

Query: 1    DLLGIDLHGRLYFDSCGYLLVSNSPDAVSLFNYYHRNDLHVVIDVLKSMDTLYGDILMAI 180
            DLLG+D HG LYFDSCGYLLVSNS DA SLFNYYHRND+HVVI+VLKSM  LYGD+LM I
Sbjct: 859  DLLGMDPHGCLYFDSCGYLLVSNSSDAGSLFNYYHRNDIHVVIEVLKSMGALYGDLLMTI 918

Query: 181  CKHWDVPVE------------------SKLTGEYSAMHTSVAPFTSSETCMDKNQADDQR 306
            CKHWD+P +                   ++T EY A  TS+APFTSSE CM KN  DD +
Sbjct: 919  CKHWDLPSDLNAEASSLAVFNRSSCKNMQMTAEYYATPTSLAPFTSSEPCMGKNLVDDHK 978

Query: 307  KLDESSTIDCCTLHGQEFPKAGNRLDSMTTIESPCIASEGS 429
            KL ++STIDCC   GQ+FPKAGN+LDS  TI SP IAS+GS
Sbjct: 979  KLKKNSTIDCCIQDGQDFPKAGNQLDS--TIGSPGIASKGS 1017


>ref|XP_003540620.1| PREDICTED: uncharacterized protein LOC100791832 [Glycine max]
          Length = 1702

 Score =  170 bits (430), Expect = 1e-40
 Identities = 89/143 (62%), Positives = 100/143 (69%)
 Frame = +1

Query: 1    DLLGIDLHGRLYFDSCGYLLVSNSPDAVSLFNYYHRNDLHVVIDVLKSMDTLYGDILMAI 180
            DLLG+DL GRLYF+SCGYLLVSNS +A SLFNYYHRNDLHVVI+ LKSMD LY  ILM I
Sbjct: 738  DLLGMDLDGRLYFNSCGYLLVSNSSEAGSLFNYYHRNDLHVVIEALKSMDPLYEGILMTI 797

Query: 181  CKHWDVPVESKLTGEYSAMHTSVAPFTSSETCMDKNQADDQRKLDESSTIDCCTLHGQEF 360
             KHWD+     +                       N+A+DQRKLDE+STID C    QEF
Sbjct: 798  YKHWDISANLSVGDSVF------------------NRANDQRKLDENSTIDSCMHLVQEF 839

Query: 361  PKAGNRLDSMTTIESPCIASEGS 429
            PKAGNRLDS TTIESPC+AS+GS
Sbjct: 840  PKAGNRLDSTTTIESPCVASDGS 862


>ref|XP_002513535.1| hypothetical protein RCOM_1578820 [Ricinus communis]
            gi|223547443|gb|EEF48938.1| hypothetical protein
            RCOM_1578820 [Ricinus communis]
          Length = 1915

 Score =  105 bits (263), Expect = 3e-21
 Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 9/152 (5%)
 Frame = +1

Query: 1    DLLGIDLHGRLYFDSCGYLLVSNSPDAVSLFNYYHRNDLHVVIDVLKSMDTLYGDILMAI 180
            +LLG+D +GRLYF SCGYLLVS S +  S FNYYHR+DL+ VI+VL+S + +Y  IL AI
Sbjct: 794  ELLGVDPYGRLYFSSCGYLLVSESCETESSFNYYHRDDLNAVIEVLRSSEMIYSSILKAI 853

Query: 181  CKHWDVPVESKLT---------GEYSAMHTSVAPFTSSETCMDKNQADDQRKLDESSTID 333
              HW++PV S            G Y       A F SSE    KN+   +R+  E+    
Sbjct: 854  LNHWEIPVSSNGASCSLGSLNHGIYLNKCVVTAAFASSEADAIKNETAGERQPGENFVTG 913

Query: 334  CCTLHGQEFPKAGNRLDSMTTIESPCIASEGS 429
            C              +D   ++   C++SEGS
Sbjct: 914  C---------SGHIHIDVSKSVSQTCLSSEGS 936


>ref|XP_002274937.2| PREDICTED: uncharacterized protein LOC100260139 [Vitis vinifera]
          Length = 1976

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 64/164 (39%), Positives = 87/164 (53%), Gaps = 21/164 (12%)
 Frame = +1

Query: 1    DLLGIDLHGRLYFDSCGYLLVSNSPDAVSLFNYYHRNDLHVVIDVLKSMDTLYGDILMAI 180
            +LLG+D HGRLYF S GYLLVS+S D  S FN+Y RN+L+ VI+VLK  +  YG+I+ AI
Sbjct: 656  ELLGVDPHGRLYFSSYGYLLVSDSCDTESSFNHYSRNELNDVIEVLKFSEIHYGEIITAI 715

Query: 181  CKHWDVPVE-----SKLTGEYSAMHTSVA-------------PFTSSETCMDKNQADDQR 306
            CKHW   V      S L  E  A+ + +              P+T  ETC  K ++ D+R
Sbjct: 716  CKHWGSSVNLNGATSSLDSENHAIFSDMVRKAQTTAICMTPLPWT-PETCAVKEESTDER 774

Query: 307  KLDESSTID---CCTLHGQEFPKAGNRLDSMTTIESPCIASEGS 429
            K  E S  +    C +           ++S   IE+P  +SE S
Sbjct: 775  KPGEKSVAEVSLSCGVSKSITLLNSTIVNSSMEIENPIASSEQS 818


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