BLASTX nr result

ID: Glycyrrhiza24_contig00023448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023448
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU19475.1| unknown [Glycine max]                                  162   4e-38
gb|AFK46164.1| unknown [Lotus japonicus]                              162   5e-38
ref|XP_003540998.1| PREDICTED: sodium transporter HKT1-like [Gly...   161   9e-38
ref|XP_003517618.1| PREDICTED: sodium transporter HKT1-like [Gly...   149   5e-34
ref|XP_003526203.1| PREDICTED: sodium transporter HKT1-like [Gly...   144   2e-32

>gb|ACU19475.1| unknown [Glycine max]
          Length = 398

 Score =  162 bits (411), Expect = 4e-38
 Identities = 106/259 (40%), Positives = 132/259 (50%), Gaps = 48/259 (18%)
 Frame = -2

Query: 637 MKNFASFARKLEHHCSFFPISFNFHGSLLSRVLSFQFNSFLPQLCYFIILSLFGYLGLKV 458
           MKNFA  ++K    CSFFP S  F        L+F  + F  QLCYF+ILSL GYLGLKV
Sbjct: 1   MKNFAYLSQKQHRFCSFFPHSLGF----FVHFLAFHVHPFFVQLCYFVILSLLGYLGLKV 56

Query: 457 SKPRTLASPKDFDLFYXXXXXXXXXXXXXVEMEAFSNSQLILMTFLMFVGGEVFTSLLEL 278
           SKPRT   P D DLFY             VEME FSNSQLIL+T LMFVGGEVFTS+L+L
Sbjct: 57  SKPRTPVRPNDLDLFYTSVSASTVSSMVAVEMEVFSNSQLILLTLLMFVGGEVFTSVLDL 116

Query: 277 VFARFKSSQNQRTK-----------------------NRYXXXXXXXXXXXXTLKANQIE 167
           +FAR+K +Q+ + K                                       + AN+IE
Sbjct: 117 IFARYKFTQSVQNKVPTHHSYQTQSEFSPVEHICGLDKNNDNTNPFSPTKKPPINANRIE 176

Query: 166 LDVV-VSNPQSQTH------------------SNNSIIDVPSGTV------DTLKHNSLR 62
           L +V + + +S+ H                     S I+VP GTV      D LK+N L 
Sbjct: 177 LGLVSIDHSESENHKPSDSKLPDTYLQFLQIKKTKSNINVPKGTVESFNDSDRLKYNCLS 236

Query: 61  YLSLVVFGYLMVVHFFGYS 5
           +L+ VV GYL+VV F G+S
Sbjct: 237 FLTFVVLGYLVVVQFVGFS 255


>gb|AFK46164.1| unknown [Lotus japonicus]
          Length = 516

 Score =  162 bits (410), Expect = 5e-38
 Identities = 104/219 (47%), Positives = 129/219 (58%), Gaps = 7/219 (3%)
 Frame = -2

Query: 637 MKNFASFARKLEHHCSFFPISFNFHGSLLSRVLSFQFNSFLPQLCYFIILSLFGYLGLKV 458
           MK+FA F RKL+H CS F   F              F++FL QLCYFI LSLFGYL LKV
Sbjct: 1   MKSFAYFGRKLDHFCSVFHKFF------------CSFHAFLIQLCYFITLSLFGYLCLKV 48

Query: 457 SKPRTLASPKDFDLFYXXXXXXXXXXXXXVEMEAFSNSQLILMTFLMFVGGEVFTSLLEL 278
           SKPR+  S  D DLF+             +EME FSNSQLIL+TFLM +GGEVFTS+LEL
Sbjct: 49  SKPRSPVSHNDIDLFFTSVSAATVSSMTAIEMEVFSNSQLILLTFLMLLGGEVFTSMLEL 108

Query: 277 VFARFKSSQNQRTKNRYXXXXXXXXXXXXTLKANQIELDVV-VSNPQSQTHSNNSIIDVP 101
           V ARF  ++N  T  +               K+NQIE+ +V VSN +S    N+SI+ VP
Sbjct: 109 VLARFNFTKNHSTTVQLKQDPPP--------KSNQIEIGLVSVSNSESH-KQNHSILFVP 159

Query: 100 SGTVDT------LKHNSLRYLSLVVFGYLMVVHFFGYSL 2
           +   ++      LK+NSL+ LS VVFGYL V+H  G  L
Sbjct: 160 NDMAESFNYNERLKYNSLKCLSHVVFGYLTVIHIVGVCL 198


>ref|XP_003540998.1| PREDICTED: sodium transporter HKT1-like [Glycine max]
          Length = 525

 Score =  161 bits (408), Expect = 9e-38
 Identities = 104/223 (46%), Positives = 128/223 (57%), Gaps = 12/223 (5%)
 Frame = -2

Query: 637 MKNFAS-FARKLEHH--CSFFPISFNFHGSLLSRVLSFQFNSFLPQLCYFIILSLFGYLG 467
           MKNFA  F++K +H   C FFP S  F    L R L+F  + F  QLCYF+ILSL GYLG
Sbjct: 2   MKNFAYYFSQKQQHQRFCRFFPHSLGF----LVRFLAFHVHPFFIQLCYFVILSLLGYLG 57

Query: 466 LKVSKPRTLASPKDFDLFYXXXXXXXXXXXXXVEMEAFSNSQLILMTFLMFVGGEVFTSL 287
           LK SKPRT   P D DLFY             VEME FSNSQLIL+T LMFVGGEVFTS+
Sbjct: 58  LKASKPRTPLRPNDLDLFYTSVSASTVSSMVAVEMEVFSNSQLILLTLLMFVGGEVFTSM 117

Query: 286 LELVFARFK---SSQNQRTKNRYXXXXXXXXXXXXTLKANQIELDVVVSNPQSQTHSNNS 116
           L+LVFAR+K   S QN+ + N                   +  L  V    ++   S+++
Sbjct: 118 LDLVFARYKFTRSVQNKVSTNHSY--------------LTRTRLPPVDDTSENHKPSDSN 163

Query: 115 IIDVPSGTV------DTLKHNSLRYLSLVVFGYLMVVHFFGYS 5
             +VP GTV      D LK+N L YL+ +V GYL+VV F G+S
Sbjct: 164 NTNVPKGTVVSFNDSDRLKYNCLSYLTYLVLGYLVVVQFVGFS 206


>ref|XP_003517618.1| PREDICTED: sodium transporter HKT1-like [Glycine max]
          Length = 511

 Score =  149 bits (376), Expect = 5e-34
 Identities = 95/200 (47%), Positives = 121/200 (60%), Gaps = 4/200 (2%)
 Frame = -2

Query: 592 SFFPISFNFHGSLLSRVLSFQFNSFLPQLCYFIILSLFGYLGLKVSKPRTLASPKDFDLF 413
           S+F  S  F    L+ +++F F+SF  QLCY +ILSL GYLGLKVSKPR      D DLF
Sbjct: 6   SYFSRSLRF----LAGLIAFHFHSFFIQLCYLMILSLVGYLGLKVSKPRNPVRLNDLDLF 61

Query: 412 YXXXXXXXXXXXXXVEMEAFSNSQLILMTFLMFVGGEVFTSLLELVFARFKSSQNQRTKN 233
           Y             VEME FSNSQLIL T LMF+GGEVFTS+L+L+FA +K  QN+ + N
Sbjct: 62  YTSVSASTASSMVAVEMEVFSNSQLILFTLLMFLGGEVFTSMLDLLFAGYK-LQNKVSIN 120

Query: 232 RYXXXXXXXXXXXXTLKANQIELDVVVSNPQSQTHSNN----SIIDVPSGTVDTLKHNSL 65
            +               ANQIEL +V+S P S + +NN    +II+V S   D LK+N L
Sbjct: 121 PFPPTN----------HANQIELGLVLSIPHSDSENNNPCDSNIINVAS--CDRLKYNCL 168

Query: 64  RYLSLVVFGYLMVVHFFGYS 5
            YL+  V GYL++V F G+S
Sbjct: 169 SYLTYAVLGYLVMVQFVGFS 188


>ref|XP_003526203.1| PREDICTED: sodium transporter HKT1-like [Glycine max]
          Length = 645

 Score =  144 bits (363), Expect = 2e-32
 Identities = 89/187 (47%), Positives = 109/187 (58%), Gaps = 6/187 (3%)
 Frame = -2

Query: 547 RVLSFQFNSFLPQLCYFIILSLFGYLGLKVSKPRTLASPKDFDLFYXXXXXXXXXXXXXV 368
           R+ +F  + F  QLCYF+ILSL GYLGLKVSKPRT   P D DLFY             V
Sbjct: 160 RITAFHVHPFFVQLCYFVILSLLGYLGLKVSKPRTPVRPNDLDLFYTSVSASTVSSMVAV 219

Query: 367 EMEAFSNSQLILMTFLMFVGGEVFTSLLELVFARFKSSQNQRTKNRYXXXXXXXXXXXXT 188
           EME FSNSQLIL+T LMFVGGEVFTS+L+L+FAR+K +Q     +               
Sbjct: 220 EMEVFSNSQLILLTLLMFVGGEVFTSVLDLIFARYKFTQKNHKPS-------DSKLPDTY 272

Query: 187 LKANQIELDVVVSNPQSQTHSNNSIIDVPSGTV------DTLKHNSLRYLSLVVFGYLMV 26
           L+  QI+          +T SN   I+VP GTV      D LK+N L +L+ VV GYL+V
Sbjct: 273 LQFLQIK----------KTKSN---INVPKGTVESFNDSDRLKYNCLSFLTFVVLGYLVV 319

Query: 25  VHFFGYS 5
           V F G+S
Sbjct: 320 VQFVGFS 326


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