BLASTX nr result

ID: Glycyrrhiza24_contig00023434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023434
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncat...   439   e-121
ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [...   439   e-121
ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [...   433   e-119
ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [...   371   e-100
ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [...   367   2e-99

>ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncatula]
            gi|355521585|gb|AET02039.1| ATP-dependent helicase BRM
            [Medicago truncatula]
          Length = 2175

 Score =  439 bits (1130), Expect = e-121
 Identities = 219/293 (74%), Positives = 244/293 (83%)
 Frame = +3

Query: 6    EPPPMQYIRQLNQSTPQAGGPTNEGGSGNYAKSQGAPAQMPDKQTGFTKQQLHVLKAQIL 185
            EPP MQYIRQLNQST QAGGPT EGGS N AKSQ  PAQMP++Q+ FTKQQLHVLKAQIL
Sbjct: 415  EPPQMQYIRQLNQSTAQAGGPTKEGGSRNNAKSQVPPAQMPERQSAFTKQQLHVLKAQIL 474

Query: 186  AFRRLKKGEGTLPQELLRAIIPPPLEMHAQHPNHPAAGQNQDKSSGNIVAEQPRNIESNA 365
            AFRR+KKGEG LP ELL+AI PPPLE+ A+ PN PA GQNQ +S+G+I AEQPR++E+NA
Sbjct: 475  AFRRIKKGEGMLPPELLQAITPPPLEVQAEQPNQPAGGQNQVRSAGHIAAEQPRHVEANA 534

Query: 366  KELKSIPAINEHSSIKQESFARDEKYTPPPIHTQAVMPXXXXXXXXXXXAGKEEQKSVGC 545
            KE KSIPA+N HSS+KQESF+R+EK  PPP+H QAVMP           AGKEEQK++G 
Sbjct: 535  KESKSIPAVNGHSSVKQESFSREEKSAPPPVHIQAVMPSMSKESASTSSAGKEEQKTIGS 594

Query: 546  SYKTNQDSERGSNSTPVRNEIALDRGKAIAAQASVSDTMQITKPAQTSTISQPKDVGSTR 725
            S+K  QDSE G+NSTPVRNE ALDRGKAIA QASVSDTMQITKPAQ +T+SQPKDVG  R
Sbjct: 595  SFKPKQDSEHGNNSTPVRNESALDRGKAIAPQASVSDTMQITKPAQATTVSQPKDVGPAR 654

Query: 726  KYHGPLFDFPFFTRKHDSFGSSMMVXXXXXLSLAYDVKDLLFEEGMEVLHKKR 884
            KYHGPLFDFPFFTRKHDSFGSSMMV     LSLAYDVKDLL EEG EVL+KKR
Sbjct: 655  KYHGPLFDFPFFTRKHDSFGSSMMVNNNNNLSLAYDVKDLLSEEGAEVLNKKR 707


>ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2226

 Score =  439 bits (1129), Expect = e-121
 Identities = 223/294 (75%), Positives = 242/294 (82%)
 Frame = +3

Query: 3    PEPPPMQYIRQLNQSTPQAGGPTNEGGSGNYAKSQGAPAQMPDKQTGFTKQQLHVLKAQI 182
            PEPP MQY+RQLNQS PQAGGPTNEGGSGN+AKSQG P QMP  +T FTKQQLHVLKAQI
Sbjct: 430  PEPPQMQYMRQLNQSAPQAGGPTNEGGSGNHAKSQGPPTQMPQHRTSFTKQQLHVLKAQI 489

Query: 183  LAFRRLKKGEGTLPQELLRAIIPPPLEMHAQHPNHPAAGQNQDKSSGNIVAEQPRNIESN 362
            LAFRRLKKGEGTLPQELLRAI+PPPLEM  Q PNH A GQNQDK +GNIVAE    IES+
Sbjct: 490  LAFRRLKKGEGTLPQELLRAIVPPPLEMQVQQPNHAAGGQNQDKPAGNIVAELISPIESS 549

Query: 363  AKELKSIPAINEHSSIKQESFARDEKYTPPPIHTQAVMPXXXXXXXXXXXAGKEEQKSVG 542
            AKE  SIP+IN  SS+KQESF RDEK   P +H QAV P           AGKEEQKS+G
Sbjct: 550  AKEPLSIPSINGQSSLKQESFVRDEKSIVPAVHVQAVAPPVSKESAPTLSAGKEEQKSIG 609

Query: 543  CSYKTNQDSERGSNSTPVRNEIALDRGKAIAAQASVSDTMQITKPAQTSTISQPKDVGST 722
            CS K+NQD ER +N+T VRNE+ALDRGKA+A QA VSDTMQI KPAQTS++ QPKDVGST
Sbjct: 610  CSVKSNQDGERVNNNT-VRNELALDRGKAVAPQAHVSDTMQIKKPAQTSSVPQPKDVGST 668

Query: 723  RKYHGPLFDFPFFTRKHDSFGSSMMVXXXXXLSLAYDVKDLLFEEGMEVLHKKR 884
            RKYHGPLFDFPFFTRKHDSFGSSMM+     LSLAYDVKDLLFEEGMEVL+KKR
Sbjct: 669  RKYHGPLFDFPFFTRKHDSFGSSMMLNNNNNLSLAYDVKDLLFEEGMEVLNKKR 722


>ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2229

 Score =  433 bits (1113), Expect = e-119
 Identities = 222/294 (75%), Positives = 241/294 (81%)
 Frame = +3

Query: 3    PEPPPMQYIRQLNQSTPQAGGPTNEGGSGNYAKSQGAPAQMPDKQTGFTKQQLHVLKAQI 182
            PEPP MQY RQLNQS PQAGGPTNEGG GN AKSQG PAQMP ++T FTKQQLHVLKAQI
Sbjct: 432  PEPPQMQYTRQLNQSAPQAGGPTNEGGLGNPAKSQGRPAQMPQQRTNFTKQQLHVLKAQI 491

Query: 183  LAFRRLKKGEGTLPQELLRAIIPPPLEMHAQHPNHPAAGQNQDKSSGNIVAEQPRNIESN 362
            LAFRRLKKGEGTLPQELLRAI+PPPLEM AQ PNH A GQNQDK +GNI AEQ   IES+
Sbjct: 492  LAFRRLKKGEGTLPQELLRAIVPPPLEMQAQQPNHSARGQNQDKPAGNIAAEQISPIESS 551

Query: 363  AKELKSIPAINEHSSIKQESFARDEKYTPPPIHTQAVMPXXXXXXXXXXXAGKEEQKSVG 542
            AKE +SIP+IN  SS+K ESFARDEK   PP+H QAV P           AGK++QKS+G
Sbjct: 552  AKEPQSIPSINGQSSLKHESFARDEKSIVPPVHVQAVAPPVSKESAPTLSAGKKDQKSIG 611

Query: 543  CSYKTNQDSERGSNSTPVRNEIALDRGKAIAAQASVSDTMQITKPAQTSTISQPKDVGST 722
            CS K+NQD E  +N+T VRNE+ALDRGKAIA QA VSDTMQI KP+QTST  QPKDVG T
Sbjct: 612  CSVKSNQDGECVNNTT-VRNELALDRGKAIAPQAPVSDTMQIKKPSQTSTGPQPKDVGPT 670

Query: 723  RKYHGPLFDFPFFTRKHDSFGSSMMVXXXXXLSLAYDVKDLLFEEGMEVLHKKR 884
            RKYHGPLFDFPFFTRKHDSFGSSMM+     LSLAYDVKDLLFEEGMEVL+KKR
Sbjct: 671  RKYHGPLFDFPFFTRKHDSFGSSMMLNNNNNLSLAYDVKDLLFEEGMEVLNKKR 724


>ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score =  371 bits (952), Expect = e-100
 Identities = 194/294 (65%), Positives = 223/294 (75%), Gaps = 1/294 (0%)
 Frame = +3

Query: 6    EPPPMQYIRQLNQSTPQAGGPTNEGGSGNYAKSQGAPAQMPDKQTGFTKQQLHVLKAQIL 185
            EP  MQYIRQL+QST QAGG TNEGGSGN+ K+QG P+QMP ++ GFTKQQLHVLKAQIL
Sbjct: 431  EPAKMQYIRQLSQSTSQAGGLTNEGGSGNHPKTQGGPSQMPQQRNGFTKQQLHVLKAQIL 490

Query: 186  AFRRLKKGEGTLPQELLRAIIPPPLEMHAQHPNHPAAGQNQDKSSGNIVAEQPRNIESNA 365
            AFRRLKK EG LPQELLRAIIPPPL++  Q P H    QNQ+KS+GNIVAE PR  E NA
Sbjct: 491  AFRRLKKAEGALPQELLRAIIPPPLDLQVQQPIHSEGAQNQEKSAGNIVAEHPRQNEVNA 550

Query: 366  KELKSIPAINEHSSIKQESFARDEKYTPPPIHTQAVMPXXXXXXXXXXXAGKEEQKSVGC 545
            K+ + I +IN  +S KQE F RDE  T   +  Q               AGKEEQ+SV C
Sbjct: 551  KDSQPISSINGKNSSKQEVFVRDENSTVTAVQVQGT------PRVTKESAGKEEQQSVAC 604

Query: 546  SYKTNQDSERGSNSTPVRNEIALDRGKAIAA-QASVSDTMQITKPAQTSTISQPKDVGST 722
            S K++Q+SE G   TPVRNE+ LD+GKA+AA QASV+D MQ+ KPAQ S +SQ KDVGST
Sbjct: 605  SAKSDQESEHGIGRTPVRNELVLDKGKAVAAPQASVNDAMQLNKPAQASAVSQTKDVGST 664

Query: 723  RKYHGPLFDFPFFTRKHDSFGSSMMVXXXXXLSLAYDVKDLLFEEGMEVLHKKR 884
            RKYHGPLFDFPFFTRKHDSFGSSMM+     LSLAYDVK+LLFEEG+EVL K+R
Sbjct: 665  RKYHGPLFDFPFFTRKHDSFGSSMMI-NNNNLSLAYDVKELLFEEGIEVLGKRR 717


>ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score =  367 bits (943), Expect = 2e-99
 Identities = 195/294 (66%), Positives = 222/294 (75%), Gaps = 1/294 (0%)
 Frame = +3

Query: 6    EPPPMQYIRQLNQSTPQAGGPTNEGGSGNYAKSQGAPAQMPDKQTGFTKQQLHVLKAQIL 185
            EP  MQYIRQLNQS  QAGG TNEGGSGN+ K+QG P+QMP ++ GFTKQQLHVLKAQIL
Sbjct: 430  EPVKMQYIRQLNQSASQAGGLTNEGGSGNHTKTQGGPSQMPQQRNGFTKQQLHVLKAQIL 489

Query: 186  AFRRLKKGEGTLPQELLRAIIPPPLEMHAQHPNHPAAGQNQDKSSGNIVAEQPRNIESNA 365
            AFRRLKK EG LPQELLRAIIPPPL++  Q P H    QNQ+KS+GNIVAEQPR  E NA
Sbjct: 490  AFRRLKKAEGALPQELLRAIIPPPLDLQVQQPIHSEGAQNQEKSAGNIVAEQPRQNEVNA 549

Query: 366  KELKSIPAINEHSSIKQESFARDEKYTPPPIHTQAVMPXXXXXXXXXXXAGKEEQKSVGC 545
            KE + I +IN   S KQE F RDE      +H Q   P           AG+EEQ+SV C
Sbjct: 550  KESQPISSINGKISSKQEVFVRDENSPVTAVHLQPTPP------VTKESAGQEEQQSVAC 603

Query: 546  SYKTNQDSERGSNSTPVRNEIALDRGKAIAA-QASVSDTMQITKPAQTSTISQPKDVGST 722
            + K++Q+SE G      RNE+ LD+GKA+AA QASV+D MQ+ KPAQ ST+SQPKDVGST
Sbjct: 604  APKSDQESEHGIG----RNELVLDKGKAVAAPQASVTDAMQLNKPAQASTVSQPKDVGST 659

Query: 723  RKYHGPLFDFPFFTRKHDSFGSSMMVXXXXXLSLAYDVKDLLFEEGMEVLHKKR 884
            RKYHGPLFDFPFFTRKHDSFGSSMM+     LSLAYDVK+LLFEEGMEVL K+R
Sbjct: 660  RKYHGPLFDFPFFTRKHDSFGSSMMI-NNNNLSLAYDVKELLFEEGMEVLGKRR 712


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