BLASTX nr result

ID: Glycyrrhiza24_contig00023414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023414
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycin...   188   5e-46
ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein ...   171   7e-41
ref|XP_003606655.1| Glycine-rich RNA-binding protein [Medicago t...   154   9e-36
gb|ACF74325.1| unknown [Arachis hypogaea]                             153   1e-35
ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein ...   124   8e-27

>ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
           gi|255628821|gb|ACU14755.1| unknown [Glycine max]
          Length = 146

 Score =  188 bits (477), Expect = 5e-46
 Identities = 96/121 (79%), Positives = 102/121 (84%)
 Frame = -2

Query: 449 VMRITSAIANGSALLFQSSALPRLLCARHHSSTKLFVAGLSYDTNETVLRDAFGQHGEII 270
           VM+ITSA+ NGSAL F    LPR LC RHHSSTKLFV GLSYDTNE +LRDAFGQHGEII
Sbjct: 29  VMQITSALVNGSALRFH---LPRFLCVRHHSSTKLFVTGLSYDTNEPILRDAFGQHGEII 85

Query: 269 EVKVICDHVSGKSKGYGFVRFTSETTAATARKEMHGQILDGRRIRVSYARKA*PQGLSNN 90
           EVKVICDHV+GKS+GYGFVRF SETTAA ARKEM+GQILDGRRIRVSYA K     L NN
Sbjct: 86  EVKVICDHVTGKSRGYGFVRFVSETTAAAARKEMNGQILDGRRIRVSYAHKGERLSLPNN 145

Query: 89  S 87
           S
Sbjct: 146 S 146


>ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Glycine max]
          Length = 146

 Score =  171 bits (432), Expect = 7e-41
 Identities = 90/121 (74%), Positives = 95/121 (78%)
 Frame = -2

Query: 449 VMRITSAIANGSALLFQSSALPRLLCARHHSSTKLFVAGLSYDTNETVLRDAFGQHGEII 270
           VMRI SA+ NGSAL F    LPR L  RHHSS KLFV GLSYDTNE VLRDAFGQHGEII
Sbjct: 29  VMRIASALVNGSALHFH---LPRFLYVRHHSSIKLFVTGLSYDTNEPVLRDAFGQHGEII 85

Query: 269 EVKVICDHVSGKSKGYGFVRFTSETTAATARKEMHGQILDGRRIRVSYARKA*PQGLSNN 90
           EVKVICDHV+GKS+GYGFVRF SET AA   KEM+GQILDGR IRVSYA K     L NN
Sbjct: 86  EVKVICDHVTGKSRGYGFVRFLSETIAAATHKEMNGQILDGRCIRVSYAHKGERLSLPNN 145

Query: 89  S 87
           +
Sbjct: 146 A 146


>ref|XP_003606655.1| Glycine-rich RNA-binding protein [Medicago truncatula]
           gi|355507710|gb|AES88852.1| Glycine-rich RNA-binding
           protein [Medicago truncatula]
          Length = 112

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/100 (75%), Positives = 86/100 (86%), Gaps = 1/100 (1%)
 Frame = -2

Query: 413 ALLFQSSALPRLL-CARHHSSTKLFVAGLSYDTNETVLRDAFGQHGEIIEVKVICDHVSG 237
           A +  +  LP+LL C RHHSSTKLF+AGLSY+TNETVLRD F QHG+IIEVKVIC+H +G
Sbjct: 12  ATIANTRTLPQLLLCVRHHSSTKLFIAGLSYNTNETVLRDTFEQHGQIIEVKVICNHRTG 71

Query: 236 KSKGYGFVRFTSETTAATARKEMHGQILDGRRIRVSYARK 117
           +SKGYGFVRF SET AATARKE+HGQI+DGRRIRV YA K
Sbjct: 72  ESKGYGFVRFNSETAAATARKELHGQIVDGRRIRVGYAHK 111


>gb|ACF74325.1| unknown [Arachis hypogaea]
          Length = 112

 Score =  153 bits (387), Expect = 1e-35
 Identities = 77/110 (70%), Positives = 88/110 (80%)
 Frame = -2

Query: 446 MRITSAIANGSALLFQSSALPRLLCARHHSSTKLFVAGLSYDTNETVLRDAFGQHGEIIE 267
           MR+  A+ N + LLF++S     L    HSST L V GLSYDTNETVLRDAF QHGE+IE
Sbjct: 1   MRLNPALTNATNLLFKNSCPFSPLLFPRHSSTNLLVTGLSYDTNETVLRDAFEQHGELIE 60

Query: 266 VKVICDHVSGKSKGYGFVRFTSETTAATARKEMHGQILDGRRIRVSYARK 117
           VKVICDHV+GKSKGYGFVRFT+ET+AAT RKEMH +I+DGRRIRV YA K
Sbjct: 61  VKVICDHVTGKSKGYGFVRFTTETSAATGRKEMHKKIIDGRRIRVCYAHK 110


>ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|296084274|emb|CBI24662.3| unnamed
           protein product [Vitis vinifera]
          Length = 108

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/83 (75%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
 Frame = -2

Query: 359 SSTKLFV--AGLSYDTNETVLRDAFGQHGEIIEVKVICDHVSGKSKGYGFVRFTSETTAA 186
           S  KLF+  AGLSYDTNET+L+DAFGQ+GEIIEVKVICDHVSGKSKGYGFV+FTS+  A 
Sbjct: 25  SCRKLFIGDAGLSYDTNETILKDAFGQYGEIIEVKVICDHVSGKSKGYGFVQFTSDDDAH 84

Query: 185 TARKEMHGQILDGRRIRVSYARK 117
            A KEM GQ LDGR IRV+YA K
Sbjct: 85  IALKEMDGQSLDGRNIRVTYAHK 107


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