BLASTX nr result

ID: Glycyrrhiza24_contig00023388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023388
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600705.1| Condensin complex subunit [Medicago truncatu...    64   1e-08
ref|XP_003552880.1| PREDICTED: condensin complex subunit 3-like ...    62   4e-08
ref|XP_003537443.1| PREDICTED: condensin complex subunit 3-like ...    61   8e-08

>ref|XP_003600705.1| Condensin complex subunit [Medicago truncatula]
            gi|355489753|gb|AES70956.1| Condensin complex subunit
            [Medicago truncatula]
          Length = 1076

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/77 (49%), Positives = 42/77 (54%)
 Frame = -3

Query: 450  KLELDFNLDLDGSIAMPQTPAVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTTHHHTVQ 271
            KLELDFNLDLD S+AMPQTPA Q                              T  +TV+
Sbjct: 968  KLELDFNLDLDVSVAMPQTPAAQPTRATRARRRVRIEEDSSDDEEDSQPSVVPTPVNTVK 1027

Query: 270  SRSQRASKTAAMNKMSA 220
             RSQRASKTAAMNKMS+
Sbjct: 1028 GRSQRASKTAAMNKMSS 1044


>ref|XP_003552880.1| PREDICTED: condensin complex subunit 3-like [Glycine max]
          Length = 1096

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 42/83 (50%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = -3

Query: 450  KLELDFNLDLDGSIAMPQTPAVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTTHHHTVQ 271
            KLELD +LDLDGS++MPQTPA                                T  HTVQ
Sbjct: 994  KLELDCDLDLDGSVSMPQTPAAPATRPTRSRRRVRIEEESSDEDSPSVVP---TTQHTVQ 1050

Query: 270  SRSQRASKTAAMNKM-SACRSLK 205
            SRSQRASKTAAM KM SA RSLK
Sbjct: 1051 SRSQRASKTAAMKKMSSATRSLK 1073


>ref|XP_003537443.1| PREDICTED: condensin complex subunit 3-like [Glycine max]
          Length = 1033

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 41/83 (49%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = -3

Query: 450  KLELDFNLDLDGSIAMPQTPAVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTTHHHTVQ 271
            KLELD +LDL+GS++MPQTPA                                T HH+V 
Sbjct: 931  KLELDCDLDLNGSVSMPQTPAAPPTRPTRSRRRVRIEEESSDEDSPSAVP---TTHHSVI 987

Query: 270  SRSQRASKTAAMNKM-SACRSLK 205
            SRSQRASKTAAMNKM SA RSLK
Sbjct: 988  SRSQRASKTAAMNKMSSATRSLK 1010


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