BLASTX nr result

ID: Glycyrrhiza24_contig00023366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023366
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528948.1| PREDICTED: LOB domain-containing protein 41-...   193   1e-47
gb|AFW90574.1| LOB domain protein 40 [Solanum tuberosum]              176   2e-42
tpg|DAA53643.1| TPA: hypothetical protein ZEAMMB73_351242 [Zea m...   171   7e-41
ref|XP_002533415.1| LOB domain-containing protein, putative [Ric...   171   7e-41
ref|XP_002457436.1| hypothetical protein SORBIDRAFT_03g007270 [S...   170   1e-40

>ref|XP_003528948.1| PREDICTED: LOB domain-containing protein 41-like [Glycine max]
          Length = 232

 Score =  193 bits (490), Expect = 1e-47
 Identities = 101/135 (74%), Positives = 108/135 (80%), Gaps = 1/135 (0%)
 Frame = -2

Query: 407 MRLSCNGCRVLRRGCDPDCPIRRCLXXXXXXXXXXSPDSQSNATLFLAKFYGRAGLLNLL 228
           MRLSCNGCRVLRRGC  +CPIR  L           P+SQSNATLFLAKFYGR GLL LL
Sbjct: 1   MRLSCNGCRVLRRGCTTECPIRISLQWINS------PNSQSNATLFLAKFYGRQGLLTLL 54

Query: 227 TAAPPHLQPAVFKSLLYEACGRIVNPVFGSTGLLSTGSWHLCEAAVKAVLSGAPIPQA-L 51
           T AP  LQ AV KSLLYEACGRIVNPV GSTGLLSTG+WHLCEAAVKAVL+GAPI QA L
Sbjct: 55  TNAPSQLQQAVLKSLLYEACGRIVNPVLGSTGLLSTGNWHLCEAAVKAVLNGAPIEQAPL 114

Query: 50  DGAVSLHLQSCDIRH 6
           DGA SL L++C+IRH
Sbjct: 115 DGATSLQLKACNIRH 129


>gb|AFW90574.1| LOB domain protein 40 [Solanum tuberosum]
          Length = 244

 Score =  176 bits (445), Expect = 2e-42
 Identities = 86/138 (62%), Positives = 108/138 (78%), Gaps = 4/138 (2%)
 Frame = -2

Query: 407 MRLSCNGCRVLRRGCDPDCPIRRCLXXXXXXXXXXSPDSQSNATLFLAKFYGRAGLLNLL 228
           MRLSCNGCRVLR+GC+  C I+ CL           P++QSNATLFLAKFYGRAGLLNL+
Sbjct: 1   MRLSCNGCRVLRKGCNEKCSIKPCLQWIQS------PEAQSNATLFLAKFYGRAGLLNLI 54

Query: 227 TAAPPHLQPAVFKSLLYEACGRIVNPVFGSTGLLSTGSWHLCEAAVKAVLSGAPIPQ--- 57
            + P HL+PA+F+SLLYEACGRIVNP++GSTGLL++G+W LC+AAV+AVL+GAPI +   
Sbjct: 55  NSGPDHLRPAIFRSLLYEACGRIVNPIYGSTGLLTSGNWPLCQAAVEAVLNGAPIVKLSV 114

Query: 56  -ALDGAVSLHLQSCDIRH 6
            +   A S  L++CDIRH
Sbjct: 115 DSAADATSPSLKACDIRH 132


>tpg|DAA53643.1| TPA: hypothetical protein ZEAMMB73_351242 [Zea mays]
          Length = 298

 Score =  171 bits (432), Expect = 7e-41
 Identities = 82/135 (60%), Positives = 104/135 (77%), Gaps = 1/135 (0%)
 Frame = -2

Query: 407 MRLSCNGCRVLRRGCDPDCPIRRCLXXXXXXXXXXSPDSQSNATLFLAKFYGRAGLLNLL 228
           MR+SCNGCRVLR+GC  +C IR CL           PD+Q NAT+FLAKFYGRAGL+NL+
Sbjct: 1   MRMSCNGCRVLRKGCSDNCAIRPCLQWIRS------PDAQGNATVFLAKFYGRAGLINLI 54

Query: 227 TAAPPHLQPAVFKSLLYEACGRIVNPVFGSTGLLSTGSWHLCEAAVKAVLSGAPIPQALD 48
           TA P H++PA+F+SLLYEACGR++NPV+GS GLL +G+W LC+AAV++VL G PI Q   
Sbjct: 55  TAGPEHVRPAIFRSLLYEACGRMLNPVYGSVGLLWSGNWQLCQAAVESVLRGIPIAQPPP 114

Query: 47  GAVSL-HLQSCDIRH 6
            A ++  L+SCDIRH
Sbjct: 115 TATAVPPLRSCDIRH 129


>ref|XP_002533415.1| LOB domain-containing protein, putative [Ricinus communis]
           gi|223526744|gb|EEF28973.1| LOB domain-containing
           protein, putative [Ricinus communis]
          Length = 239

 Score =  171 bits (432), Expect = 7e-41
 Identities = 84/134 (62%), Positives = 101/134 (75%)
 Frame = -2

Query: 407 MRLSCNGCRVLRRGCDPDCPIRRCLXXXXXXXXXXSPDSQSNATLFLAKFYGRAGLLNLL 228
           MRLSC+GCRVLR+GC  DC I+ CL           P SQ+NATLFLAKFYGRAGL+NL+
Sbjct: 1   MRLSCSGCRVLRKGCSDDCTIKPCLQWLNS------PKSQANATLFLAKFYGRAGLINLI 54

Query: 227 TAAPPHLQPAVFKSLLYEACGRIVNPVFGSTGLLSTGSWHLCEAAVKAVLSGAPIPQALD 48
            A P HL+PA+FKSLLYEACGRIVNPV+GS GLL T +W LC+AAV+AVL G PI Q + 
Sbjct: 55  NAGPQHLRPAIFKSLLYEACGRIVNPVYGSVGLLWTRNWQLCQAAVEAVLRGEPIKQ-IS 113

Query: 47  GAVSLHLQSCDIRH 6
            +  L + +C+IRH
Sbjct: 114 SSNELAINACEIRH 127


>ref|XP_002457436.1| hypothetical protein SORBIDRAFT_03g007270 [Sorghum bicolor]
           gi|241929411|gb|EES02556.1| hypothetical protein
           SORBIDRAFT_03g007270 [Sorghum bicolor]
          Length = 297

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/136 (60%), Positives = 102/136 (75%), Gaps = 2/136 (1%)
 Frame = -2

Query: 407 MRLSCNGCRVLRRGCDPDCPIRRCLXXXXXXXXXXSPDSQSNATLFLAKFYGRAGLLNLL 228
           MR+SCNGCRVLR+GC  +C IR CL           PD+Q NAT+FLAKFYGRAGL+NL+
Sbjct: 1   MRMSCNGCRVLRKGCSDNCAIRPCLQWIRS------PDAQGNATVFLAKFYGRAGLINLI 54

Query: 227 TAAPPHLQPAVFKSLLYEACGRIVNPVFGSTGLLSTGSWHLCEAAVKAVLSGAPI--PQA 54
           TA P H++PA+F+SLLYEACGR++NPV+GS GLL +G+W LC+AAV++VL G PI  P  
Sbjct: 55  TAGPEHVRPAIFRSLLYEACGRMLNPVYGSVGLLWSGNWQLCQAAVESVLRGMPIAQPPP 114

Query: 53  LDGAVSLHLQSCDIRH 6
           L       L+SCDIRH
Sbjct: 115 LAATAVPPLRSCDIRH 130


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