BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023344
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24
ref|XP_003625566.1| Pentatricopeptide repeat-containing protein ...   112   4e-23
ref|XP_003623099.1| 40S ribosomal protein S23, partial [Medicago...   112   4e-23

>ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
           chloroplastic-like [Glycine max]
          Length = 811

 Score =  115 bits (287), Expect = 5e-24
 Identities = 82/155 (52%), Positives = 95/155 (61%), Gaps = 9/155 (5%)
 Frame = -3

Query: 438 MRDFMILGSSIVTP--PPPNPHLPXXXXXXXXXXXXSTPQHRHSIKP-HKSPRPKLSPFP 268
           MRDF+ILGSS+VTP      PH                 QHRH IKP HK   PKL+PF 
Sbjct: 1   MRDFVILGSSVVTPFSSSSTPH----------------HQHRHPIKPPHKPSLPKLAPF- 43

Query: 267 SSTWXXXXXNSCTTLQAPLTLNHS-----VQEFETVLQGALDSGV-NVELLAKVVLLGIR 106
           SS W      SC  LQAPL L+H      VQEFE V +  +DSGV + ELLAKVVLLGIR
Sbjct: 44  SSNWNI----SCA-LQAPLALSHCADSKLVQEFEVVFEDFIDSGVVDAELLAKVVLLGIR 98

Query: 105 GRNVQTVIDTLNKVQAPGISLSTHLDDSAMNVIAK 1
           G+ V++VI  LNKVQ   ISLSTHL+ S  ++IAK
Sbjct: 99  GKKVRSVIHALNKVQGRRISLSTHLNGS--DIIAK 131


>ref|XP_003625566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500581|gb|AES81784.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 829

 Score =  112 bits (279), Expect = 4e-23
 Identities = 76/143 (53%), Positives = 90/143 (62%), Gaps = 2/143 (1%)
 Frame = -3

Query: 438 MRDFMILGSSIVTPPPPNPHLPXXXXXXXXXXXXSTPQHRHSI-KPHKSPRPKLSPFPSS 262
           MRDF+ILGSSI+TP   +                STPQHRH+I K HKS  P LSP  +S
Sbjct: 1   MRDFVILGSSIITPRSSSSS-------------SSTPQHRHTIIKSHKSSLPNLSPRNNS 47

Query: 261 TWXXXXXNSCTTLQAPLTLNHSVQEFETVLQGALDSGVNVELLAKVVLLGIRGRNVQTVI 82
           T         + LQ PL L    +EFETVL G LDS V+VELLA  VL+GI+ RNV+TVI
Sbjct: 48  T---------SLLQTPLIL----KEFETVLHGELDSDVDVELLANAVLIGIQDRNVRTVI 94

Query: 81  DTLNKVQA-PGISLSTHLDDSAM 16
           D+LNKV+    ISLSTHLD SA+
Sbjct: 95  DSLNKVEGLSEISLSTHLDASAI 117


>ref|XP_003623099.1| 40S ribosomal protein S23, partial [Medicago truncatula]
           gi|355498114|gb|AES79317.1| 40S ribosomal protein S23,
           partial [Medicago truncatula]
          Length = 157

 Score =  112 bits (279), Expect = 4e-23
 Identities = 76/143 (53%), Positives = 90/143 (62%), Gaps = 2/143 (1%)
 Frame = -3

Query: 438 MRDFMILGSSIVTPPPPNPHLPXXXXXXXXXXXXSTPQHRHSI-KPHKSPRPKLSPFPSS 262
           MRDF+ILGSSI+TP   +                STPQHRH+I K HKS  P LSP  +S
Sbjct: 1   MRDFVILGSSIITPRSSSSS-------------SSTPQHRHTIIKSHKSSLPNLSPRNNS 47

Query: 261 TWXXXXXNSCTTLQAPLTLNHSVQEFETVLQGALDSGVNVELLAKVVLLGIRGRNVQTVI 82
           T         + LQ PL L    +EFETVL G LDS V+VELLA  VL+GI+ RNV+TVI
Sbjct: 48  T---------SLLQTPLIL----KEFETVLHGELDSDVDVELLANAVLIGIQDRNVRTVI 94

Query: 81  DTLNKVQA-PGISLSTHLDDSAM 16
           D+LNKV+    ISLSTHLD SA+
Sbjct: 95  DSLNKVEGLSEISLSTHLDASAI 117