BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023320
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555488.1| PREDICTED: pentatricopeptide repeat-containi...   268   3e-70
ref|XP_003535468.1| PREDICTED: pentatricopeptide repeat-containi...   264   5e-69
ref|XP_003591641.1| Pentatricopeptide repeat-containing protein ...   261   5e-68
ref|XP_003536829.1| PREDICTED: pentatricopeptide repeat-containi...   237   8e-61
ref|XP_002517032.1| pentatricopeptide repeat-containing protein,...   233   1e-59

>ref|XP_003555488.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
            [Glycine max]
          Length = 821

 Score =  268 bits (686), Expect = 3e-70
 Identities = 135/164 (82%), Positives = 148/164 (90%)
 Frame = +2

Query: 2    EMIEHGVKPDVIVYGVLINAFSDVGRFKEAIRYVEEMERAGLPGNTVIYNSLIKLYAKVG 181
            EMI HGV+PDVIV+G+LIN FSD GR KEAI YV+EM++AGLPGNTVIYNSLIKLYAK+ 
Sbjct: 584  EMIRHGVQPDVIVHGILINVFSDAGRVKEAIGYVDEMKKAGLPGNTVIYNSLIKLYAKID 643

Query: 182  YLEKVQETYKLLQSSEEGPSVYSSNCMIDLYTKHSMVDQAKEIFETLKKNGTASEFTFAM 361
             LEK +E YKLLQ S+EGP VYSSNCMIDLY K SMVDQAKEIFETLKKNG A+EFTFAM
Sbjct: 644  NLEKAKEAYKLLQLSDEGPGVYSSNCMIDLYVKRSMVDQAKEIFETLKKNGAANEFTFAM 703

Query: 362  MLCLYKKIDRFDEAIQIAKQMRKLGLMTDSLSYNNVLDLYAIAG 493
            MLCLYKKI+RFDEAIQIAKQ+RKLG +TD LSYNNVLDLYAIAG
Sbjct: 704  MLCLYKKIERFDEAIQIAKQIRKLGPLTD-LSYNNVLDLYAIAG 746



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
 Frame = +2

Query: 41  YGVLINAFSDVGRFKEAIRYVEEMERAGLPGNTVIYNSLIKLYAKVGYLEKVQETYKLLQ 220
           Y  LI+ +   G+ KEA +   EM + G+   TV +N++I +    G LE+V    + ++
Sbjct: 284 YNTLIDTYGKAGQLKEASQTFVEMLKQGVAPTTVTFNTMINICGNHGRLEEVSLLVRKME 343

Query: 221 SSEEGPSVYSSNCMIDLYTKHSMVDQAKEIFETLKKNGTASEF-TFAMMLCLYKKIDRFD 397
                P+  + N +I L+ KH  +  A + FET+K+     +  ++  +L  Y       
Sbjct: 344 ELRCSPNTRTYNILISLHAKHDDIGMATKYFETMKEACLEPDLVSYRTLLYAYSIRKMIR 403

Query: 398 EAIQIAKQMRKLGLMTDSLSYNNVLDLYAIAG 493
           EA ++ K+M K  L  D  + + +  +Y  AG
Sbjct: 404 EAEELVKEMDKRRLEIDQYTQSALTRMYIEAG 435



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
 Frame = +2

Query: 2   EMIEHGVKPDVIVYGVLINAFSDVGRFKEAIRYVEEMERAGLPGNTVIYNSLIKLYAKVG 181
           EM++ GV P  + +  +IN   + GR +E    V +ME      NT  YN LI L+AK  
Sbjct: 306 EMLKQGVAPTTVTFNTMINICGNHGRLEEVSLLVRKMEELRCSPNTRTYNILISLHAKHD 365

Query: 182 YLEKVQETYKLLQSSEEGPSVYSSNCMIDLYTKHSMVDQAKEIFETL-KKNGTASEFTFA 358
            +    + ++ ++ +   P + S   ++  Y+   M+ +A+E+ + + K+     ++T +
Sbjct: 366 DIGMATKYFETMKEACLEPDLVSYRTLLYAYSIRKMIREAEELVKEMDKRRLEIDQYTQS 425

Query: 359 MMLCLYKKIDRFDEAIQIAKQMRKLGLMTDSLSYNNVLDLYAIAG 493
            +  +Y +    D ++    +    G MT S  Y   +D Y   G
Sbjct: 426 ALTRMYIEAGMLDRSLLWFLRFHVAGNMT-SECYAANIDAYGEHG 469


>ref|XP_003535468.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
            [Glycine max]
          Length = 813

 Score =  264 bits (675), Expect = 5e-69
 Identities = 133/164 (81%), Positives = 147/164 (89%)
 Frame = +2

Query: 2    EMIEHGVKPDVIVYGVLINAFSDVGRFKEAIRYVEEMERAGLPGNTVIYNSLIKLYAKVG 181
            EMI HGV+PDVIVY +LIN FSD GR KEAI YV+EM++AGLPGNTVIYNSLIKLYAK+ 
Sbjct: 576  EMIRHGVQPDVIVYSILINVFSDAGRVKEAISYVDEMKKAGLPGNTVIYNSLIKLYAKID 635

Query: 182  YLEKVQETYKLLQSSEEGPSVYSSNCMIDLYTKHSMVDQAKEIFETLKKNGTASEFTFAM 361
             LEK QE YKLLQ SEEGP+VYSSNCMIDLY K SMV QAK+IF+TLKKNG A+EFTFAM
Sbjct: 636  NLEKAQEAYKLLQLSEEGPNVYSSNCMIDLYVKQSMVGQAKQIFDTLKKNGGANEFTFAM 695

Query: 362  MLCLYKKIDRFDEAIQIAKQMRKLGLMTDSLSYNNVLDLYAIAG 493
            MLCLYKKI+RFDEAIQIAKQ+RKLG +T+ LSYNNVLDLYAIAG
Sbjct: 696  MLCLYKKIERFDEAIQIAKQIRKLGPLTE-LSYNNVLDLYAIAG 738



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
 Frame = +2

Query: 2   EMIEHGVKPDVIVYGVLINAFSDVGRFKEAIRYVEEMERAGLPGNTVIYNSLIKLYAKVG 181
           +M++ GV P  + +  +IN   + G+ +E    V +ME      NT  YN LI LYAK  
Sbjct: 298 KMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLVRKMEELRCSPNTRTYNILISLYAKHD 357

Query: 182 YLEKVQETYKLLQSSEEGPSVYSSNCMIDLYTKHSMVDQAKEIFETL-KKNGTASEFTFA 358
            +    + +++++ +   P + S   ++  Y+   MV +A+E+ + + ++     ++T +
Sbjct: 358 DIGMATKYFEIMKEACLEPDLVSYRTLLYAYSIRKMVGEAEELVKEMDERRLEIDQYTQS 417

Query: 359 MMLCLYKKIDRFDEAIQIAKQMRKLGLMTDSLSYNNVLDLYAIAG 493
            +  +Y K    D+++    +    G MT S  Y   +D Y   G
Sbjct: 418 ALTRMYIKAGMLDQSLLWFLRFHVAGNMT-SECYAASIDAYGEHG 461



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/179 (21%), Positives = 82/179 (45%), Gaps = 18/179 (10%)
 Frame = +2

Query: 5   MIEHGVKPDVIVYGVLINAFSDVGRFKEAIRYVE-------------EMERAGLPGNTVI 145
           M+  GV+PD +   +++  +   G F++A  + +             E++   +  N   
Sbjct: 212 MLGQGVQPDEVTMVIVVQLYKKAGEFQKAEEFFKKWSLGNDNAMATLELDERVVCANASF 271

Query: 146 ----YNSLIKLYAKVGYLEKVQETYKLLQSSEEGPSVYSSNCMIDLYTKHSMVDQAKEIF 313
               YN+LI  Y K G L++  ET+  +      P+  + N MI++   H  +++   + 
Sbjct: 272 GSHTYNTLIDTYGKAGQLKEASETFAKMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLV 331

Query: 314 ETLKK-NGTASEFTFAMMLCLYKKIDRFDEAIQIAKQMRKLGLMTDSLSYNNVLDLYAI 487
             +++   + +  T+ +++ LY K D    A +  + M++  L  D +SY  +L  Y+I
Sbjct: 332 RKMEELRCSPNTRTYNILISLYAKHDDIGMATKYFEIMKEACLEPDLVSYRTLLYAYSI 390


>ref|XP_003591641.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|92882355|gb|ABE86686.1| Tetratricopeptide-like helical
            [Medicago truncatula] gi|355480689|gb|AES61892.1|
            Pentatricopeptide repeat-containing protein [Medicago
            truncatula]
          Length = 827

 Score =  261 bits (666), Expect = 5e-68
 Identities = 132/164 (80%), Positives = 143/164 (87%)
 Frame = +2

Query: 2    EMIEHGVKPDVIVYGVLINAFSDVGRFKEAIRYVEEMERAGLPGNTVIYNSLIKLYAKVG 181
            EMI HGVKPD+IVYGVLINA    GR KEAI Y  E++RAGLPGNTVIYNSLIKLY KVG
Sbjct: 588  EMIGHGVKPDIIVYGVLINALYGAGRVKEAISYANEIKRAGLPGNTVIYNSLIKLYTKVG 647

Query: 182  YLEKVQETYKLLQSSEEGPSVYSSNCMIDLYTKHSMVDQAKEIFETLKKNGTASEFTFAM 361
             L + QETY+LLQSSEEGP+VYSSNCMI LYTK SMV+QAKEIFETLKKNGTA+EF+FAM
Sbjct: 648  NLREAQETYRLLQSSEEGPAVYSSNCMIGLYTKQSMVEQAKEIFETLKKNGTANEFSFAM 707

Query: 362  MLCLYKKIDRFDEAIQIAKQMRKLGLMTDSLSYNNVLDLYAIAG 493
            MLCLYK I+RFD AIQIA QMRKL L+TDSLSYN VLDLYA AG
Sbjct: 708  MLCLYKNIERFDVAIQIANQMRKLELLTDSLSYNIVLDLYATAG 751



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
 Frame = +2

Query: 41  YGVLINAFSDVGRFKEAIRYVEEMERAGLPGNTVIYNSLIKLYAKVGYLEKVQETYKLLQ 220
           Y  LI+ +   G+ KEA     +M + G+P  TV +N++I +    G LE+V    + + 
Sbjct: 288 YNTLIDTYGKAGQHKEASETFAKMLKQGIPPTTVTFNTMIHICGNHGRLEEVSSLLRKMG 347

Query: 221 SSEEGPSVYSSNCMIDLYTKHSMVDQAKEIFETLKKNGTASE-FTFAMMLCLYKKIDRFD 397
                P   + N +I L+TKH+ +D A + F+ +K++    +  ++  +L  Y       
Sbjct: 348 ELRCSPDTRTYNTLISLHTKHNDIDMATKYFKRMKESYLEPDPVSYRTLLYAYSIRKMVC 407

Query: 398 EAIQIAKQMRKLGLMTDSLSYNNVLDLYAIAG 493
           EA ++  +M + GL  D  + + +  +Y  AG
Sbjct: 408 EAEELITEMDEKGLEIDQFTQSALTRMYIEAG 439



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 27/188 (14%)
 Frame = +2

Query: 5   MIEHGVKPDVIVYGVLINAFSDVGRFKEAIRYV--------------------EEMERA- 121
           M+EHG++PD +   +++  +   G F++A  +                     E +ERA 
Sbjct: 218 MLEHGIEPDEVTMVIVVQLYKKAGEFQKAEEFFRKWSLGEPLRPSNKHMMDAPESVERAL 277

Query: 122 --GLPGNTVIYNSLIKLYAKVGYLEKVQETYKLLQSSEEGPSVYSSNCMIDLYTKHSMVD 295
                  +  YN+LI  Y K G  ++  ET+  +      P+  + N MI +   H  ++
Sbjct: 278 FSNASFGSHTYNTLIDTYGKAGQHKEASETFAKMLKQGIPPTTVTFNTMIHICGNHGRLE 337

Query: 296 QAKEIFETLKKNG----TASEFTFAMMLCLYKKIDRFDEAIQIAKQMRKLGLMTDSLSYN 463
              E+   L+K G    +    T+  ++ L+ K +  D A +  K+M++  L  D +SY 
Sbjct: 338 ---EVSSLLRKMGELRCSPDTRTYNTLISLHTKHNDIDMATKYFKRMKESYLEPDPVSYR 394

Query: 464 NVLDLYAI 487
            +L  Y+I
Sbjct: 395 TLLYAYSI 402



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
 Frame = +2

Query: 5   MIEHGVKPDVIVYGVLINAFSDVGRFKEAIRYVEEMERAGLPGNTVIYNSLIKLYAKVGY 184
           M E  ++PD + Y  L+ A+S      EA   + EM+  GL  +    ++L ++Y + G 
Sbjct: 381 MKESYLEPDPVSYRTLLYAYSIRKMVCEAEELITEMDEKGLEIDQFTQSALTRMYIEAGM 440

Query: 185 LEKVQETYKLLQSSEEGPS-VYSSNCMIDLYTKHSMVDQAKEIFETLKKNGTASEFTFAM 361
            E+    ++    +    S  Y++N  ID Y +   + +A+++F   ++    S   F +
Sbjct: 441 PERSLLWFQRFHRAGNMTSECYAAN--IDAYGERGHISEAEKVFLWCQERKNLSAVEFNV 498

Query: 362 MLCLYKKIDRFDEAIQIAKQMRKLGLMTDSLSYNNVLDLYAIA 490
           M+  Y     +D+A Q+   M K G+  D  SY++++ + A A
Sbjct: 499 MIKAYGVGKYYDKACQLFDSMDKHGVAADRCSYSSLIQVLASA 541


>ref|XP_003536829.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
            [Glycine max]
          Length = 787

 Score =  237 bits (604), Expect = 8e-61
 Identities = 114/162 (70%), Positives = 137/162 (84%)
 Frame = +2

Query: 2    EMIEHGVKPDVIVYGVLINAFSDVGRFKEAIRYVEEMERAGLPGNTVIYNSLIKLYAKVG 181
            EM+ + V+PDVI+YGV INAF+D G  KEAI YV EM +AGLPGN  IYNSLIKLY KVG
Sbjct: 549  EMLGYAVQPDVIIYGVFINAFADAGSVKEAINYVNEMRKAGLPGNPAIYNSLIKLYTKVG 608

Query: 182  YLEKVQETYKLLQSSEEGPSVYSSNCMIDLYTKHSMVDQAKEIFETLKKNGTASEFTFAM 361
            YL++ QETYKL+Q S+EGPS++SSNCMIDLYT+  MV+QAKEIFE+L KN  A+EF++AM
Sbjct: 609  YLKEAQETYKLIQLSDEGPSLFSSNCMIDLYTERLMVEQAKEIFESLMKNEVANEFSYAM 668

Query: 362  MLCLYKKIDRFDEAIQIAKQMRKLGLMTDSLSYNNVLDLYAI 487
            MLC+YKKI R DEAIQIA QMR+LG +TD LSYNNVL LY++
Sbjct: 669  MLCMYKKIGRLDEAIQIATQMRRLGFLTDILSYNNVLGLYSM 710



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
 Frame = +2

Query: 20  VKPDVIVYGVLINAFSDVGRFKEAIRYVEEMERAGLPGNTVIYNSLIKLYAKVGYLEKVQ 199
           ++PDV+ Y  L+ A+S     +EA   + EM+   L  +    ++L ++Y + G LE+  
Sbjct: 347 LEPDVVSYRTLLYAYSTRKMVREAEELIREMDERDLEIDEFTQSALTRMYVESGMLEQSW 406

Query: 200 ETYKLLQ-SSEEGPSVYSSNCMIDLYTKHSMVDQAKEIFETLKKNGTASEFTFAMMLCLY 376
             ++    +       YS+N  ID Y +      A+++F   K+    +   F +M+  Y
Sbjct: 407 LWFRRFHLAGNISSDCYSAN--IDAYGEWGYTLAAEKVFICCKEKKKLTVLEFNVMIKAY 464

Query: 377 KKIDRFDEAIQIAKQMRKLGLMTDSLSYNNVLDLYAIA 490
                +D+A Q+   M+K G++ D  SY++++ + A A
Sbjct: 465 GIGKCYDKACQLFDSMKKFGVVADKCSYSSLIHILASA 502


>ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543667|gb|EEF45195.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 875

 Score =  233 bits (594), Expect = 1e-59
 Identities = 114/164 (69%), Positives = 138/164 (84%)
 Frame = +2

Query: 2    EMIEHGVKPDVIVYGVLINAFSDVGRFKEAIRYVEEMERAGLPGNTVIYNSLIKLYAKVG 181
            EM+   VKPD+IVYGVLINAF+D G  KEAI Y++ M+ AGLPGNTVIYNSLIKLY KVG
Sbjct: 633  EMVGFDVKPDIIVYGVLINAFADSGCVKEAISYIDAMKGAGLPGNTVIYNSLIKLYTKVG 692

Query: 182  YLEKVQETYKLLQSSEEGPSVYSSNCMIDLYTKHSMVDQAKEIFETLKKNGTASEFTFAM 361
            YL + QETYKLLQSS+ GP  YSSNCMIDLY++ SMV  A+EIFE++K+ G A+EFT+AM
Sbjct: 693  YLREAQETYKLLQSSDVGPETYSSNCMIDLYSEQSMVKPAEEIFESMKRKGDANEFTYAM 752

Query: 362  MLCLYKKIDRFDEAIQIAKQMRKLGLMTDSLSYNNVLDLYAIAG 493
            MLC+YK++  F++AIQIAKQMR+LGL+T  LSYNNVL LYA+ G
Sbjct: 753  MLCMYKRLGWFEQAIQIAKQMRELGLLTYLLSYNNVLGLYALDG 796



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/152 (22%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
 Frame = +2

Query: 41  YGVLINAFSDVGRFKEAIRYVEEMERAGLPGNTVIYNSLIKLYAKVGYLEKVQETYKLLQ 220
           Y  +I+ +   G+ KEA     EM R  +   TV +N++I +    G LE+V    + ++
Sbjct: 333 YNTMIDTYGKAGQIKEASDIFAEMLRKRILPTTVTFNTMIHICGNQGQLEEVALLMQKME 392

Query: 221 SSEEGPSVYSSNCMIDLYTKHSMVDQAKEIFETLKKNGTASEF-TFAMMLCLYKKIDRFD 397
                P   + N +I ++ KH+ ++ A   F+ +KK+    +  ++  +L  +      +
Sbjct: 393 ELRCPPDTRTYNILIFIHAKHNDINMAASYFKRMKKDQLQPDLVSYRTLLYAFSIRHMVN 452

Query: 398 EAIQIAKQMRKLGLMTDSLSYNNVLDLYAIAG 493
           +A  +  +M + G+  D  + + +  +Y  AG
Sbjct: 453 DAENLVSEMDEKGIEIDEYTQSALTRMYIEAG 484



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
 Frame = +2

Query: 20  VKPDVIVYGVLINAFSDVGRFKEAIRYVEEMERAGLPGNTVIYNSLIKLYAKVGYLEKVQ 199
           ++PD++ Y  L+ AFS      +A   V EM+  G+  +    ++L ++Y + G LEK  
Sbjct: 431 LQPDLVSYRTLLYAFSIRHMVNDAENLVSEMDEKGIEIDEYTQSALTRMYIEAGMLEKSW 490

Query: 200 ETY-KLLQSSEEGPSVYSSNCMIDLYTKHSMVDQAKEIFETLKKNGTASEFTFAMMLCLY 376
             + +   +       YS+N  ID Y +   V +A  +F    +    +   F +M+  Y
Sbjct: 491 LWFWRFHLAGNMSSECYSAN--IDAYGERGHVKEAARVFACRLEQNKLTVLEFNVMIKAY 548

Query: 377 KKIDRFDEAIQIAKQMRKLGLMTDSLSYNNVLDLYAIA 490
                +++A  +   M   G++ D  SY++++ + A A
Sbjct: 549 GFGKNYEKACDLFDSMESHGVVPDKCSYSSLVQILASA 586