BLASTX nr result

ID: Glycyrrhiza24_contig00023309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023309
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636002.1| Gamma-tubulin complex component [Medicago tr...   117   7e-25
ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780...   108   6e-22
emb|CBI21631.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255...    76   2e-12
emb|CAN81051.1| hypothetical protein VITISV_024737 [Vitis vinifera]    76   2e-12

>ref|XP_003636002.1| Gamma-tubulin complex component [Medicago truncatula]
           gi|355501937|gb|AES83140.1| Gamma-tubulin complex
           component [Medicago truncatula]
          Length = 1206

 Score =  117 bits (294), Expect = 7e-25
 Identities = 61/100 (61%), Positives = 65/100 (65%)
 Frame = +2

Query: 2   GAPVPGFLKDLLVPLVRAGXXXXXXXXXXXXCIDVAAGEHSSADFLPCWXXXXXXXXXXX 181
           G P+PGFLKD LVPLVRAG            CIDVAAG+HSS DFLPCW           
Sbjct: 330 GVPIPGFLKDSLVPLVRAGQQLQVLLKLLELCIDVAAGQHSSDDFLPCWSGFSSNSLSYF 389

Query: 182 XXXXXXKYIIENMVLVRESYYKRMNEKIENLLSSLEVRYQ 301
                 K  I+NMVL RESYYKRMNEKIE+LLSSLEVRYQ
Sbjct: 390 SPLTFNKDTIDNMVLARESYYKRMNEKIESLLSSLEVRYQ 429


>ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780017 [Glycine max]
          Length = 1179

 Score =  108 bits (269), Expect = 6e-22
 Identities = 58/100 (58%), Positives = 63/100 (63%)
 Frame = +2

Query: 2   GAPVPGFLKDLLVPLVRAGXXXXXXXXXXXXCIDVAAGEHSSADFLPCWXXXXXXXXXXX 181
           G P+PGFLKD LVPLVRAG            CI VA+GEHS  DFLPCW           
Sbjct: 333 GVPIPGFLKDFLVPLVRAGLQLQVLLKLLETCIHVASGEHSCHDFLPCW-SGFSSSLSYS 391

Query: 182 XXXXXXKYIIENMVLVRESYYKRMNEKIENLLSSLEVRYQ 301
                 K +IE MVL RE+YYKRMNEKIE+LLSSLEVRYQ
Sbjct: 392 SPLTFSKDVIEAMVLARENYYKRMNEKIESLLSSLEVRYQ 431


>emb|CBI21631.3| unnamed protein product [Vitis vinifera]
          Length = 1043

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/100 (42%), Positives = 50/100 (50%)
 Frame = +2

Query: 2   GAPVPGFLKDLLVPLVRAGXXXXXXXXXXXXCIDVAAGEHSSADFLPCWXXXXXXXXXXX 181
           G  VP FLKDLLVPL RAG            C  VA  +H+  D LPCW           
Sbjct: 353 GVAVPCFLKDLLVPLFRAGQQLQVLKKLLEICNYVATDDHTYEDILPCWRGFSSNHPSCA 412

Query: 182 XXXXXXKYIIENMVLVRESYYKRMNEKIENLLSSLEVRYQ 301
                 K  IE MVL R  +Y+RM +K+ENL + LE RY+
Sbjct: 413 SLLTFNKGNIEAMVLARNHFYERMQQKLENLSTKLETRYR 452


>ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255993 [Vitis vinifera]
          Length = 1239

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/100 (42%), Positives = 50/100 (50%)
 Frame = +2

Query: 2   GAPVPGFLKDLLVPLVRAGXXXXXXXXXXXXCIDVAAGEHSSADFLPCWXXXXXXXXXXX 181
           G  VP FLKDLLVPL RAG            C  VA  +H+  D LPCW           
Sbjct: 352 GVAVPCFLKDLLVPLFRAGQQLQVLKKLLEICNYVATDDHTYEDILPCWRGFSSNHPSCA 411

Query: 182 XXXXXXKYIIENMVLVRESYYKRMNEKIENLLSSLEVRYQ 301
                 K  IE MVL R  +Y+RM +K+ENL + LE RY+
Sbjct: 412 SLLTFNKGNIEAMVLARNHFYERMQQKLENLSTKLETRYR 451


>emb|CAN81051.1| hypothetical protein VITISV_024737 [Vitis vinifera]
          Length = 1070

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/100 (42%), Positives = 50/100 (50%)
 Frame = +2

Query: 2   GAPVPGFLKDLLVPLVRAGXXXXXXXXXXXXCIDVAAGEHSSADFLPCWXXXXXXXXXXX 181
           G  VP FLKDLLVPL RAG            C  VA  +H+  D LPCW           
Sbjct: 503 GVAVPCFLKDLLVPLFRAGQQLQVLKKLLEICNYVATDDHTYEDILPCWRGFSSNHPSCA 562

Query: 182 XXXXXXKYIIENMVLVRESYYKRMNEKIENLLSSLEVRYQ 301
                 K  IE MVL R  +Y+RM +K+ENL + LE RY+
Sbjct: 563 SLLTFNKGNIEAMVLARNHFYERMQQKLENLSTKLETRYR 602


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