BLASTX nr result

ID: Glycyrrhiza24_contig00023308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023308
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_538815.1| NADH dehydrogenase subunit 6 [Glycine max] gi|1...   182   2e-44
ref|YP_002149782.1| NADH-plastoquinone oxidoreductase subunit 6 ...   179   2e-43
ref|XP_003604160.1| NAD(P)H-quinone oxidoreductase subunit 6 [Me...   177   6e-43
ref|YP_001381677.1| NADH-plastoquinone oxidoreductase subunit 6 ...   177   6e-43
ref|NP_084848.1| NADH dehydrogenase subunit 6 [Lotus japonicus] ...   176   2e-42

>ref|YP_538815.1| NADH dehydrogenase subunit 6 [Glycine max]
           gi|122202478|sp|Q2PMN5.1|NU6C_SOYBN RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 6,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase
           subunit 6; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 6 gi|83595793|gb|ABC25174.1|
           NADH-plastoquinone oxidoreductase subunit 6 [Glycine
           max]
          Length = 176

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/91 (97%), Positives = 90/91 (98%)
 Frame = -1

Query: 473 VGAINVLIIFAVMFMNSSEYYQDFRLWTVGDGITLMVCTSIFVSLITTILDTSWYGIIWT 294
           VGAINVLIIFAVMFMN SEYYQDFRLWTVGDGITLMVCTSIFVSLITTILDTSW+GIIWT
Sbjct: 67  VGAINVLIIFAVMFMNGSEYYQDFRLWTVGDGITLMVCTSIFVSLITTILDTSWHGIIWT 126

Query: 293 TRPNQIIEQDLISTSQQIGIHLSTDFFLPFE 201
           TRPNQIIEQDLISTSQQIGIHLSTDFFLPFE
Sbjct: 127 TRPNQIIEQDLISTSQQIGIHLSTDFFLPFE 157


>ref|YP_002149782.1| NADH-plastoquinone oxidoreductase subunit 6 [Cicer arietinum]
           gi|221272317|sp|B5LMS3.1|NU6C_CICAR RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 6,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase
           subunit 6; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 6 gi|197089850|gb|ACH41120.1|
           NADH-plastoquinone oxidoreductase subunit 6 [Cicer
           arietinum]
          Length = 176

 Score =  179 bits (454), Expect = 2e-43
 Identities = 86/91 (94%), Positives = 89/91 (97%)
 Frame = -1

Query: 473 VGAINVLIIFAVMFMNSSEYYQDFRLWTVGDGITLMVCTSIFVSLITTILDTSWYGIIWT 294
           VGAIN+LIIFAVMFMNSSEYYQDF LWTVGDGITL+VCTSIFVSL+TTI DTSWYGIIWT
Sbjct: 67  VGAINILIIFAVMFMNSSEYYQDFNLWTVGDGITLIVCTSIFVSLVTTIPDTSWYGIIWT 126

Query: 293 TRPNQIIEQDLISTSQQIGIHLSTDFFLPFE 201
           TRPNQIIEQDLISTSQQIGIHLSTDFFLPFE
Sbjct: 127 TRPNQIIEQDLISTSQQIGIHLSTDFFLPFE 157


>ref|XP_003604160.1| NAD(P)H-quinone oxidoreductase subunit 6 [Medicago truncatula]
           gi|355505215|gb|AES86357.1| NAD(P)H-quinone
           oxidoreductase subunit 6 [Medicago truncatula]
          Length = 280

 Score =  177 bits (450), Expect = 6e-43
 Identities = 86/91 (94%), Positives = 88/91 (96%)
 Frame = -1

Query: 473 VGAINVLIIFAVMFMNSSEYYQDFRLWTVGDGITLMVCTSIFVSLITTILDTSWYGIIWT 294
           VGAIN+LIIFAVMFMNSSEYYQDF LWTVGDGITL+VCTSIFVSLIT I DTSWYGIIWT
Sbjct: 67  VGAINILIIFAVMFMNSSEYYQDFNLWTVGDGITLIVCTSIFVSLITIISDTSWYGIIWT 126

Query: 293 TRPNQIIEQDLISTSQQIGIHLSTDFFLPFE 201
           TRPNQIIEQDLISTSQQIGIHLSTDFFLPFE
Sbjct: 127 TRPNQIIEQDLISTSQQIGIHLSTDFFLPFE 157


>ref|YP_001381677.1| NADH-plastoquinone oxidoreductase subunit 6 [Medicago truncatula]
          Length = 176

 Score =  177 bits (450), Expect = 6e-43
 Identities = 86/91 (94%), Positives = 88/91 (96%)
 Frame = -1

Query: 473 VGAINVLIIFAVMFMNSSEYYQDFRLWTVGDGITLMVCTSIFVSLITTILDTSWYGIIWT 294
           VGAIN+LIIFAVMFMNSSEYYQDF LWTVGDGITL+VCTSIFVSLIT I DTSWYGIIWT
Sbjct: 67  VGAINILIIFAVMFMNSSEYYQDFNLWTVGDGITLIVCTSIFVSLITIISDTSWYGIIWT 126

Query: 293 TRPNQIIEQDLISTSQQIGIHLSTDFFLPFE 201
           TRPNQIIEQDLISTSQQIGIHLSTDFFLPFE
Sbjct: 127 TRPNQIIEQDLISTSQQIGIHLSTDFFLPFE 157


>ref|NP_084848.1| NADH dehydrogenase subunit 6 [Lotus japonicus]
           gi|23821907|sp|Q9BBP1.1|NU6C_LOTJA RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 6,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase
           subunit 6; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 6 gi|13359031|dbj|BAB33248.1|
           NADH dehydrogenase ND6 [Lotus japonicus]
          Length = 176

 Score =  176 bits (445), Expect = 2e-42
 Identities = 85/91 (93%), Positives = 87/91 (95%)
 Frame = -1

Query: 473 VGAINVLIIFAVMFMNSSEYYQDFRLWTVGDGITLMVCTSIFVSLITTILDTSWYGIIWT 294
           VGAINVLIIF VMFMN SEYYQDFRLWTVGDG+TLMVCTSIF+SLITTI DTSWYGIIWT
Sbjct: 67  VGAINVLIIFGVMFMNGSEYYQDFRLWTVGDGMTLMVCTSIFISLITTIPDTSWYGIIWT 126

Query: 293 TRPNQIIEQDLISTSQQIGIHLSTDFFLPFE 201
           TR NQIIEQDLISTSQQIGIHLSTDFFLPFE
Sbjct: 127 TRSNQIIEQDLISTSQQIGIHLSTDFFLPFE 157


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