BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023304
         (802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM...   448   e-124
ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago...   439   e-121
ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, put...   383   e-104
ref|XP_002321063.1| predicted protein [Populus trichocarpa] gi|2...   379   e-103
emb|CAA66406.1| orf12 [Arabidopsis thaliana]                          372   e-101

>ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM1-like [Glycine max]
          Length = 505

 Score =  448 bits (1153), Expect = e-124
 Identities = 216/240 (90%), Positives = 230/240 (95%)
 Frame = +3

Query: 3   LIHFDLPNGQCYLHTGDFRAIKPMQAYHLLVNKRVNVLYLDTTYCNPKYKFPSKEDVLDY 182
           LIHF+LPNGQ YLHTGDFRA K MQAYHLLVN+RVNVLYLDTTYCNPKY+FPSKE+VL+Y
Sbjct: 265 LIHFNLPNGQRYLHTGDFRACKLMQAYHLLVNQRVNVLYLDTTYCNPKYRFPSKEEVLNY 324

Query: 183 VVKITKNHLKMHPRTLVVVGAYSIGKECVYLNISKALGVKIYSNASRRRILLAFNWPDLS 362
           VVKITKNHLK+HPRTLVVVGAYSIGKECVYL ISKALGVKIY+NASRRRIL AF WPDLS
Sbjct: 325 VVKITKNHLKIHPRTLVVVGAYSIGKECVYLAISKALGVKIYANASRRRILQAFGWPDLS 384

Query: 363 DRLCTNGNNTLLHILPMSSLRIETLKDYLKTYKEQFTAILAFRPTGWTFSEKIGNHLELI 542
           D+LCTNGNNTLLH+LPMSSLR+ETLKDYLKTYKEQFTAILAFRPTGWTFSEKI N LELI
Sbjct: 385 DKLCTNGNNTLLHVLPMSSLRVETLKDYLKTYKEQFTAILAFRPTGWTFSEKISNDLELI 444

Query: 543 KPVSRGNITIYGVPYSEHSSFIELRDFVQFLKPDKIIPTVNVGNAANREKMQSYFRDWLR 722
           KPVS+GNITIYGVPYSEHSSF EL+DFVQ L+PDKIIPTVNVGNAANREKMQSYFRDWL+
Sbjct: 445 KPVSKGNITIYGVPYSEHSSFSELQDFVQVLRPDKIIPTVNVGNAANREKMQSYFRDWLK 504


>ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago truncatula]
           gi|87241310|gb|ABD33168.1| DNA repair
           metallo-beta-lactamase [Medicago truncatula]
           gi|355499554|gb|AES80757.1| DNA cross-link repair
           protein SNM1 [Medicago truncatula]
          Length = 511

 Score =  439 bits (1130), Expect = e-121
 Identities = 212/240 (88%), Positives = 225/240 (93%)
 Frame = +3

Query: 3   LIHFDLPNGQCYLHTGDFRAIKPMQAYHLLVNKRVNVLYLDTTYCNPKYKFPSKEDVLDY 182
           LIHF+LPNGQCYLHTGDFRA K MQ YHL VNKRVNVLYLDTTYCNPKYKFPSK+DVL+Y
Sbjct: 271 LIHFELPNGQCYLHTGDFRACKLMQDYHLFVNKRVNVLYLDTTYCNPKYKFPSKDDVLNY 330

Query: 183 VVKITKNHLKMHPRTLVVVGAYSIGKECVYLNISKALGVKIYSNASRRRILLAFNWPDLS 362
           VVKIT NHLK +PRTLVVVGAYSIGKECVYL ISKALGVKI+ NASRRRILLA++ PD S
Sbjct: 331 VVKITNNHLKKYPRTLVVVGAYSIGKECVYLAISKALGVKIHVNASRRRILLAYDCPDYS 390

Query: 363 DRLCTNGNNTLLHILPMSSLRIETLKDYLKTYKEQFTAILAFRPTGWTFSEKIGNHLELI 542
           DRLCTNGNNTLLH+LPMSSLRIETLK+YLKTYKEQFT++LAFRPTGWTFSEKIGN L LI
Sbjct: 391 DRLCTNGNNTLLHVLPMSSLRIETLKEYLKTYKEQFTSVLAFRPTGWTFSEKIGNDLALI 450

Query: 543 KPVSRGNITIYGVPYSEHSSFIELRDFVQFLKPDKIIPTVNVGNAANREKMQSYFRDWLR 722
           KPVS GNIT YGVPYSEHSSF ELRDFVQFL+PDKIIPTVNVGNAANREKMQSYFRDWL+
Sbjct: 451 KPVSNGNITTYGVPYSEHSSFTELRDFVQFLRPDKIIPTVNVGNAANREKMQSYFRDWLK 510


>ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223547811|gb|EEF49303.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 493

 Score =  383 bits (983), Expect = e-104
 Identities = 178/239 (74%), Positives = 210/239 (87%)
 Frame = +3

Query: 3   LIHFDLPNGQCYLHTGDFRAIKPMQAYHLLVNKRVNVLYLDTTYCNPKYKFPSKEDVLDY 182
           L+HF L NG CYLHTGDFRA K MQ+YHLLVN++VN LYLDTTYCNPKYKFPSKEDVL+Y
Sbjct: 253 LLHFRLSNGLCYLHTGDFRASKVMQSYHLLVNQKVNALYLDTTYCNPKYKFPSKEDVLNY 312

Query: 183 VVKITKNHLKMHPRTLVVVGAYSIGKECVYLNISKALGVKIYSNASRRRILLAFNWPDLS 362
           VV++TK+ LK  P TL+VVGAYSIGKECVYL+ISKALGVKIY++ASRR+IL +F W DLS
Sbjct: 313 VVRVTKDFLKQQPETLIVVGAYSIGKECVYLSISKALGVKIYASASRRQILESFGWSDLS 372

Query: 363 DRLCTNGNNTLLHILPMSSLRIETLKDYLKTYKEQFTAILAFRPTGWTFSEKIGNHLELI 542
             LCT   +T LH+LP+SSLR+ETLKDYLK Y  Q+ A+LAFRPTGWT+SE +G  L+LI
Sbjct: 373 RSLCTQPKDTPLHVLPISSLRVETLKDYLKKYINQYRAVLAFRPTGWTYSENVGKKLDLI 432

Query: 543 KPVSRGNITIYGVPYSEHSSFIELRDFVQFLKPDKIIPTVNVGNAANREKMQSYFRDWL 719
           +P+S+GN+TIYGVPYSEHSSF EL++FV+FLKPDKIIPTVNVGN  NREKMQS+FR+WL
Sbjct: 433 RPISKGNVTIYGVPYSEHSSFTELKEFVEFLKPDKIIPTVNVGNPTNREKMQSHFREWL 491


>ref|XP_002321063.1| predicted protein [Populus trichocarpa] gi|222861836|gb|EEE99378.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  379 bits (974), Expect = e-103
 Identities = 182/240 (75%), Positives = 205/240 (85%)
 Frame = +3

Query: 3   LIHFDLPNGQCYLHTGDFRAIKPMQAYHLLVNKRVNVLYLDTTYCNPKYKFPSKEDVLDY 182
           L+HF LP G CYLHTGDFRA K MQA+ LL N RVNVLYLDTTYCNPKYKFPSKEDVL Y
Sbjct: 142 LLHFRLPTGLCYLHTGDFRASKLMQAHPLLANNRVNVLYLDTTYCNPKYKFPSKEDVLSY 201

Query: 183 VVKITKNHLKMHPRTLVVVGAYSIGKECVYLNISKALGVKIYSNASRRRILLAFNWPDLS 362
           VV++TK+ LK  P+TLVVVGAYSIGKE VYL ISKALGVKIY+N SRRRIL +F WPDLS
Sbjct: 202 VVRVTKSSLKKQPKTLVVVGAYSIGKESVYLAISKALGVKIYANNSRRRILQSFGWPDLS 261

Query: 363 DRLCTNGNNTLLHILPMSSLRIETLKDYLKTYKEQFTAILAFRPTGWTFSEKIGNHLELI 542
             LCT   +T LH+LP+SSLR ETLKDYLK +  Q+ A+LAFRPTGWT+SE +G  L+LI
Sbjct: 262 TNLCTKAIDTCLHVLPISSLRYETLKDYLKNHVNQYAAVLAFRPTGWTYSEGLGRELDLI 321

Query: 543 KPVSRGNITIYGVPYSEHSSFIELRDFVQFLKPDKIIPTVNVGNAANREKMQSYFRDWLR 722
           +P +RGNITIYGVPYSEHSSF ELRDFV+FLKPDKIIPTVNVGN  NR+KMQSYFR+WL+
Sbjct: 322 RPSTRGNITIYGVPYSEHSSFTELRDFVEFLKPDKIIPTVNVGNPDNRDKMQSYFREWLK 381


>emb|CAA66406.1| orf12 [Arabidopsis thaliana]
          Length = 484

 Score =  372 bits (956), Expect = e-101
 Identities = 177/241 (73%), Positives = 207/241 (85%)
 Frame = +3

Query: 3   LIHFDLPNGQCYLHTGDFRAIKPMQAYHLLVNKRVNVLYLDTTYCNPKYKFPSKEDVLDY 182
           LIHF L +G CYLHTGDFRA K MQ + LL N+RV+VLYLDTTYCNP+YKFPSKEDVL Y
Sbjct: 244 LIHFRLLDGTCYLHTGDFRASKQMQTHPLLFNQRVHVLYLDTTYCNPRYKFPSKEDVLSY 303

Query: 183 VVKITKNHLKMHPRTLVVVGAYSIGKECVYLNISKALGVKIYSNASRRRILLAFNWPDLS 362
           VV+ITK+ L+  P+TL+VVG+YSIGKECVYL I+KALGVKI++NASRRRIL +F W D+S
Sbjct: 304 VVRITKDFLRKQPKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDIS 363

Query: 363 DRLCTNGNNTLLHILPMSSLRIETLKDYLKTYKEQFTAILAFRPTGWTFSEKIGNHLELI 542
             L T+G  T LH+LPMSSL++E L ++LK Y+EQ+ A+LAFRPTGWT+SEKIG HL+LI
Sbjct: 364 KNLSTDGKATCLHVLPMSSLKVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLI 423

Query: 543 KPVSRGNITIYGVPYSEHSSFIELRDFVQFLKPDKIIPTVNVGNAANREKMQSYFRDWLR 722
           KP SRG ITIYGVPYSEHSSF ELR+FVQFL+PDKIIPTVN GNA  REKMQS FR+WLR
Sbjct: 424 KPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQSCFREWLR 483

Query: 723 P 725
           P
Sbjct: 484 P 484