BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023298
         (947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    85   3e-14
gb|AFK45241.1| unknown [Lotus japonicus]                               82   1e-13
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...    78   3e-12
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    77   4e-12
gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]                77   8e-12

>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 46/139 (33%), Positives = 74/139 (53%)
 Frame = -1

Query: 461 ILRDYTGGFWFAFSCNLGDCTVLIAELWAILYGVRFA*AKGCSNILIESDSHLVVRLLEK 282
           +LRD+ G +   F+ N+G C+  +AELW + YG+  A  +G   + +E DS +VV  L  
Sbjct: 181 VLRDHNGAWIGGFAVNIGVCSAPLAELWGVYYGLFIAWGRGARRVELEVDSKMVVGFLTT 240

Query: 281 GCSTRYPCHVLAHQIMQYIREVSTIQISHVLHEANQVAHHLARHGLSLEVRCCLFESLHS 102
           G +  +P   L      ++ +   ++ISHV  EAN++A  LA +  SL +   L ES   
Sbjct: 241 GIADSHPLSFLLRLCYDFLSKGWIVRISHVYREANRLADGLANYAFSLSLGLHLLESRPD 300

Query: 101 FIALPCLADSSSVVFPRGV 45
            ++   L D + V +PR V
Sbjct: 301 VVSSILLDDVAGVSYPRHV 319


>gb|AFK45241.1| unknown [Lotus japonicus]
          Length = 165

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 40/106 (37%), Positives = 59/106 (55%)
 Frame = -1

Query: 455 RDYTGGFWFAFSCNLGDCTVLIAELWAILYGVRFA*AKGCSNILIESDSHLVVRLLEKGC 276
           RD+ G F   F+  +G C++L AELW +++G+RF   +G S ILIE+DS   +  L KGC
Sbjct: 59  RDHHGNFLLGFTMKVGVCSILHAELWGLVHGLRFVLGRGFSKILIEADSAGTIEFLNKGC 118

Query: 275 STRYPCHVLAHQIMQYIREVSTIQISHVLHEANQVAHHLARHGLSL 138
              +PC  L  +    + +   I   HV  E N VA   A++GL +
Sbjct: 119 PVVHPCFPLVREFHHLVGQNCYIHWKHVYREVNFVADSFAKNGLRI 164


>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 676

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 44/139 (31%), Positives = 70/139 (50%)
 Frame = -1

Query: 461 ILRDYTGGFWFAFSCNLGDCTVLIAELWAILYGVRFA*AKGCSNILIESDSHLVVRLLEK 282
           ++RD  G +   F+ N+G C+  +AELW + YG+  A  +G   + +E DS LVV  L+ 
Sbjct: 536 VIRDEHGSWLVGFALNIGVCSAPLAELWGVYYGLVVAWERGWRRVRLEVDSALVVGFLQS 595

Query: 281 GCSTRYPCHVLAHQIMQYIREVSTIQISHVLHEANQVAHHLARHGLSLEVRCCLFESLHS 102
           G    +P   L      +I +   ++I+HV  EAN++A  LA +  +L     L +S   
Sbjct: 596 GIGDSHPLAFLVRLCHGFISKDWIVRITHVYREANRLADGLANYAFTLPFGFLLLDSCPE 655

Query: 101 FIALPCLADSSSVVFPRGV 45
            ++   L D     FPR V
Sbjct: 656 HVSSILLEDVMGTSFPRHV 674


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 77.4 bits (189), Expect(2) = 4e-12
 Identities = 48/152 (31%), Positives = 72/152 (47%)
 Frame = -1

Query: 500  LKAIGGARFAREDILRDYTGGFWFAFSCNLGDCTVLIAELWAILYGVRFA*AKGCSNILI 321
            L A GGA       +R+  G +   F+ N+G C   +AELW   YG+  A  KG   + +
Sbjct: 1085 LAAAGGA-------IRNGQGEWLGGFALNIGSCAAPLAELWGAYYGLLIAWDKGFRRVEL 1137

Query: 320  ESDSHLVVRLLEKGCSTRYPCHVLAHQIMQYIREVSTIQISHVLHEANQVAHHLARHGLS 141
            + D  LVV  L  G S  +P   L      +      +++SHV  EAN++A  LA +  +
Sbjct: 1138 DLDCKLVVGFLSTGVSNAHPLSFLVRLCQGFFTRDWLVRVSHVYREANRLADGLANYAFT 1197

Query: 140  LEVRCCLFESLHSFIALPCLADSSSVVFPRGV 45
            L +    F++    + L  LAD +   FPR V
Sbjct: 1198 LPLGLHCFDACPEGVRLLLLADVNGTEFPRAV 1229



 Score = 20.4 bits (41), Expect(2) = 4e-12
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 541  EAPPYGYVKLTCDGS 497
            + P  G+VK+T DG+
Sbjct: 1064 QVPSDGWVKITTDGA 1078


>gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]
          Length = 253

 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 43/139 (30%), Positives = 69/139 (49%)
 Frame = -1

Query: 461 ILRDYTGGFWFAFSCNLGDCTVLIAELWAILYGVRFA*AKGCSNILIESDSHLVVRLLEK 282
           ++RD  G + + FS N+G C+  +AELW   YG+  A  +G + + +E DS +VV  L  
Sbjct: 113 VVRDGDGNWCYGFSLNIGICSAPLAELWGAYYGLNIAWERGVTQLEMEIDSEMVVGFLRT 172

Query: 281 GCSTRYPCHVLAHQIMQYIREVSTIQISHVLHEANQVAHHLARHGLSLEVRCCLFESLHS 102
           G    +P   L       + +  +++ISHV  EAN++A  LA +   L +   LF S   
Sbjct: 173 GIDDSHPLSFLVRLCHGLLSKDWSVRISHVYREANRLADGLANYAFFLPLGFHLFNSTPD 232

Query: 101 FIALPCLADSSSVVFPRGV 45
            +      D +   +PR V
Sbjct: 233 IVMSIVHDDVAGSAYPRNV 251