BLASTX nr result

ID: Glycyrrhiza24_contig00023297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023297
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003587586.1| ribosomal protein S8 [Pisum sativum] gi|2933...   141   6e-32
ref|YP_001381694.1| ribosomal protein S8 [Medicago truncatula]        135   3e-30
gb|AFK43521.1| unknown [Lotus japonicus]                              132   2e-29
ref|NP_084832.1| ribosomal protein S8 [Lotus japonicus] gi|24212...   132   2e-29
ref|YP_538800.1| ribosomal protein S8 [Glycine max] gi|351725811...   129   2e-28

>ref|YP_003587586.1| ribosomal protein S8 [Pisum sativum] gi|293338611|gb|ADE43584.1|
           ribosomal protein S8 (chloroplast) [Pisum sativum]
          Length = 134

 Score =  141 bits (355), Expect = 6e-32
 Identities = 71/76 (93%), Positives = 73/76 (96%)
 Frame = +3

Query: 126 VGKDTIADILTSICNADRNRKRTVQIPLTNITENIVKILLREGFVENVRKHRESNKYFLV 305
           +GKDTIADILT I NAD NRKRTVQIPLTNITENIVKILLREGFVENVRKHRESNKYFLV
Sbjct: 1   MGKDTIADILTLIRNADMNRKRTVQIPLTNITENIVKILLREGFVENVRKHRESNKYFLV 60

Query: 306 LTLRYRRNRKGSYKTF 353
           LTLRYRRNRKGSYK+F
Sbjct: 61  LTLRYRRNRKGSYKSF 76


>ref|YP_001381694.1| ribosomal protein S8 [Medicago truncatula]
          Length = 134

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/76 (90%), Positives = 71/76 (93%)
 Frame = +3

Query: 126 VGKDTIADILTSICNADRNRKRTVQIPLTNITENIVKILLREGFVENVRKHRESNKYFLV 305
           +GKDTIAD+LT I NAD NRKRTVQIPLTNITENIVKILLREGFVENVRKH ESNKYFLV
Sbjct: 1   MGKDTIADMLTLIRNADMNRKRTVQIPLTNITENIVKILLREGFVENVRKHGESNKYFLV 60

Query: 306 LTLRYRRNRKGSYKTF 353
           LTLRYRRNRK SYKTF
Sbjct: 61  LTLRYRRNRKESYKTF 76


>gb|AFK43521.1| unknown [Lotus japonicus]
          Length = 134

 Score =  132 bits (333), Expect = 2e-29
 Identities = 66/76 (86%), Positives = 70/76 (92%)
 Frame = +3

Query: 126 VGKDTIADILTSICNADRNRKRTVQIPLTNITENIVKILLREGFVENVRKHRESNKYFLV 305
           +GKDTIADI+TSI NAD NRKRTVQIP TNITEN VKILLREGF+ENVRKHRES+K FLV
Sbjct: 1   MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60

Query: 306 LTLRYRRNRKGSYKTF 353
           LTLRYRRN KGSYKTF
Sbjct: 61  LTLRYRRNTKGSYKTF 76


>ref|NP_084832.1| ribosomal protein S8 [Lotus japonicus]
           gi|24212276|sp|Q9BBQ1.1|RR8_LOTJA RecName: Full=30S
           ribosomal protein S8, chloroplastic
           gi|13359014|dbj|BAB33231.1| ribosomal protein S8 [Lotus
           japonicus] gi|388500076|gb|AFK38104.1| unknown [Lotus
           japonicus]
          Length = 134

 Score =  132 bits (333), Expect = 2e-29
 Identities = 66/76 (86%), Positives = 70/76 (92%)
 Frame = +3

Query: 126 VGKDTIADILTSICNADRNRKRTVQIPLTNITENIVKILLREGFVENVRKHRESNKYFLV 305
           +GKDTIADI+TSI NAD NRKRTVQIP TNITEN VKILLREGF+ENVRKHRES+K FLV
Sbjct: 1   MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLV 60

Query: 306 LTLRYRRNRKGSYKTF 353
           LTLRYRRN KGSYKTF
Sbjct: 61  LTLRYRRNTKGSYKTF 76


>ref|YP_538800.1| ribosomal protein S8 [Glycine max] gi|351725811|ref|NP_001238385.1|
           30S ribosomal protein S8, chloroplastic [Glycine max]
           gi|90111754|sp|Q2PMQ0.1|RR8_SOYBN RecName: Full=30S
           ribosomal protein S8, chloroplastic
           gi|83595777|gb|ABC25158.1| ribosomal protein S8 [Glycine
           max] gi|255628441|gb|ACU14565.1| unknown [Glycine max]
          Length = 134

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/76 (84%), Positives = 70/76 (92%)
 Frame = +3

Query: 126 VGKDTIADILTSICNADRNRKRTVQIPLTNITENIVKILLREGFVENVRKHRESNKYFLV 305
           +GKDTIADI+T I NAD N+K  VQIP TNITENIVKILLREGFVENVRKHRE++KYFLV
Sbjct: 1   MGKDTIADIITYIRNADMNKKGMVQIPFTNITENIVKILLREGFVENVRKHRENDKYFLV 60

Query: 306 LTLRYRRNRKGSYKTF 353
           LTLRYRRNRKGSYK+F
Sbjct: 61  LTLRYRRNRKGSYKSF 76


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