BLASTX nr result

ID: Glycyrrhiza24_contig00023296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023296
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534142.1| PREDICTED: zinc finger protein VAR3, chlorop...   234   2e-59
ref|XP_003528977.1| PREDICTED: zinc finger protein VAR3, chlorop...   228   1e-57
ref|XP_003619821.1| E3 SUMO-protein ligase RanBP2 [Medicago trun...   220   2e-55
ref|XP_002278671.2| PREDICTED: zinc finger protein VAR3, chlorop...   197   2e-48
ref|XP_002530481.1| conserved hypothetical protein [Ricinus comm...   196   4e-48

>ref|XP_003534142.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Glycine
           max]
          Length = 458

 Score =  234 bits (596), Expect = 2e-59
 Identities = 129/198 (65%), Positives = 138/198 (69%), Gaps = 7/198 (3%)
 Frame = +3

Query: 105 LALYGIVTGTALFRTRRT----VTANXXXXXXXXXXXXXXXXXXXXXXXXXXXEETTVSI 272
           L LYGI  GTALFRTRRT    VT                              E   S+
Sbjct: 7   LTLYGI--GTALFRTRRTAPVSVTPFLFFKPIPLPRPPRFLLLRDSSSSSAAAAEILPSV 64

Query: 273 DHHHPWPEWISFVDRLTTNGYLTKPSSSDD---SVYVNANLLKDACLSFARHRYDLFKLL 443
           DH  PWPEW+SFVDRL+T GYL KPSSS D   S+Y N N LKDACLSF+R RYDLFKLL
Sbjct: 65  DH--PWPEWVSFVDRLSTKGYLPKPSSSSDDTVSLYTNMNSLKDACLSFSRDRYDLFKLL 122

Query: 444 PPEDIQAVVGRGCPNLLRKAVNSAKRLRAHLRLDEGDVCSACNLRDSCDRAYVILKETEA 623
           P  DIQAVV  GCPNLLRKAVNSAKRLRAHL+LDEGDVC ACNLR SCDRAYVILK+ E 
Sbjct: 123 PTHDIQAVVEGGCPNLLRKAVNSAKRLRAHLQLDEGDVCGACNLRSSCDRAYVILKDFET 182

Query: 624 DARTVDIVRILLFYAVDP 677
           DART+DIVRILLFYA+DP
Sbjct: 183 DARTIDIVRILLFYALDP 200


>ref|XP_003528977.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Glycine
           max]
          Length = 462

 Score =  228 bits (580), Expect = 1e-57
 Identities = 128/203 (63%), Positives = 134/203 (66%), Gaps = 12/203 (5%)
 Frame = +3

Query: 105 LALYGIVTGTALFRTRRTVTANXXXXXXXXXXXXXXXXXXXXXXXXXXXE---------- 254
           L LYGI  GTALFRTRRT                                          
Sbjct: 6   LTLYGI--GTALFRTRRTAPVTVTPHSPFLFFKPIPFPPCFLRPDSSSSSSFSAAAAAAA 63

Query: 255 ETTVSIDHHHPWPEWISFVDRLTTNGYLTKPSSSDDSV--YVNANLLKDACLSFARHRYD 428
           ET  S+DH  PWPEW+SFVDRL T GYL K SSSDD+V  Y N N LKDACLSFAR RYD
Sbjct: 64  ETLPSVDH--PWPEWVSFVDRLNTKGYLPKTSSSDDTVSLYANMNSLKDACLSFARDRYD 121

Query: 429 LFKLLPPEDIQAVVGRGCPNLLRKAVNSAKRLRAHLRLDEGDVCSACNLRDSCDRAYVIL 608
           LF LLP  DIQAVV  GCPNLLRKAVNSAKRLRAHL+LDEGDVC AC LR SCDRAYVIL
Sbjct: 122 LFNLLPTNDIQAVVEGGCPNLLRKAVNSAKRLRAHLQLDEGDVCGACYLRSSCDRAYVIL 181

Query: 609 KETEADARTVDIVRILLFYAVDP 677
           K+ E DARTVDIVRILLFYA+DP
Sbjct: 182 KDFETDARTVDIVRILLFYALDP 204


>ref|XP_003619821.1| E3 SUMO-protein ligase RanBP2 [Medicago truncatula]
           gi|355494836|gb|AES76039.1| E3 SUMO-protein ligase
           RanBP2 [Medicago truncatula]
          Length = 470

 Score =  220 bits (561), Expect = 2e-55
 Identities = 110/132 (83%), Positives = 117/132 (88%)
 Frame = +3

Query: 282 HPWPEWISFVDRLTTNGYLTKPSSSDDSVYVNANLLKDACLSFARHRYDLFKLLPPEDIQ 461
           HPWPEWISFVDRL   GYL+K S+ D+SVY + NLLKDA LSFAR RYD+FKLL  EDIQ
Sbjct: 66  HPWPEWISFVDRLRAKGYLSK-SADDNSVYSDINLLKDASLSFARDRYDVFKLLSSEDIQ 124

Query: 462 AVVGRGCPNLLRKAVNSAKRLRAHLRLDEGDVCSACNLRDSCDRAYVILKETEADARTVD 641
           AVV  GCPN LRKAVNSAKRLRAHLRLDEGDVCSACNLR SCDRAYVILKE+EADARTVD
Sbjct: 125 AVVEDGCPNFLRKAVNSAKRLRAHLRLDEGDVCSACNLRGSCDRAYVILKESEADARTVD 184

Query: 642 IVRILLFYAVDP 677
           IVRILLFYA+DP
Sbjct: 185 IVRILLFYAIDP 196


>ref|XP_002278671.2| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Vitis
           vinifera] gi|297734333|emb|CBI15580.3| unnamed protein
           product [Vitis vinifera]
          Length = 410

 Score =  197 bits (501), Expect = 2e-48
 Identities = 94/134 (70%), Positives = 107/134 (79%)
 Frame = +3

Query: 276 HHHPWPEWISFVDRLTTNGYLTKPSSSDDSVYVNANLLKDACLSFARHRYDLFKLLPPED 455
           H HPWPEW++F+DRL T GY ++   +      N NL KDACL FAR R+D+FK L  +D
Sbjct: 53  HRHPWPEWVTFIDRLKTKGYFSEALPASADYDTNMNLFKDACLIFARDRFDVFKSLSRKD 112

Query: 456 IQAVVGRGCPNLLRKAVNSAKRLRAHLRLDEGDVCSACNLRDSCDRAYVILKETEADART 635
           IQ VV  GCPNL RKAVNSAKRLRA +RLDEGDVCSACNLR SCDRAYV+LKE+EA ART
Sbjct: 113 IQTVVEGGCPNLFRKAVNSAKRLRAFVRLDEGDVCSACNLRGSCDRAYVLLKESEAAART 172

Query: 636 VDIVRILLFYAVDP 677
           VDIVRILLFYA+DP
Sbjct: 173 VDIVRILLFYALDP 186


>ref|XP_002530481.1| conserved hypothetical protein [Ricinus communis]
           gi|223529978|gb|EEF31904.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 365

 Score =  196 bits (498), Expect = 4e-48
 Identities = 97/143 (67%), Positives = 110/143 (76%), Gaps = 11/143 (7%)
 Frame = +3

Query: 282 HPWPEWISFVDRLTTNGYLTKPSSSD-----------DSVYVNANLLKDACLSFARHRYD 428
           HPWPEW+SF+DRL + GY    SS+D           +SVY + N LKD CLSFAR RYD
Sbjct: 67  HPWPEWVSFIDRLKSKGYFGNTSSTDTTTTNIANDAIESVYKDTNQLKDPCLSFARDRYD 126

Query: 429 LFKLLPPEDIQAVVGRGCPNLLRKAVNSAKRLRAHLRLDEGDVCSACNLRDSCDRAYVIL 608
           L KLL  +DI+ VV  GCP+LLRK VNSAKRLRA+ RLDEGDVCSACNLR SCDRAYV+L
Sbjct: 127 LLKLLSVDDIETVVKNGCPSLLRKVVNSAKRLRAYTRLDEGDVCSACNLRGSCDRAYVLL 186

Query: 609 KETEADARTVDIVRILLFYAVDP 677
           K+ EADARTVDIVRILL YA+DP
Sbjct: 187 KDNEADARTVDIVRILLSYALDP 209


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