BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023287
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...    85   5e-15
ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma...    83   3e-14
ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal doma...    83   3e-14
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...    82   6e-14
ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal doma...    81   1e-13

>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 954

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/61 (70%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
 Frame = +3

Query: 108 VVYYGEMVLGEVDVYGDEDKWKKDLLNMKEIRTTHFSQPSERCPPLAVLHTITS-GVCFK 284
           VVY GE+V+GEVDVY +E+   K+  ++KEIR +HFSQPSERCPPLAVLHT+TS GVCFK
Sbjct: 5   VVYQGEVVVGEVDVYPEENNNYKNF-HVKEIRISHFSQPSERCPPLAVLHTVTSCGVCFK 63

Query: 285 M 287
           M
Sbjct: 64  M 64


>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 958

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/64 (64%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
 Frame = +3

Query: 99  KLVVVYYGEMVLGEVDVYGDEDKWKKDLLNMKEIRTTHFSQPSERCPPLAVLHTITS-GV 275
           K  +VY+GEM +GEV++Y +E K     +++KEIR +HFSQPSERCPPLAVLHTITS G+
Sbjct: 2   KRSMVYHGEMEVGEVEIYPEEKK----NIDLKEIRISHFSQPSERCPPLAVLHTITSFGI 57

Query: 276 CFKM 287
           CFKM
Sbjct: 58  CFKM 61


>ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 960

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/61 (65%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
 Frame = +3

Query: 108 VVYYGEMVLGEVDVYGDEDKWKKDLLNMKEIRTTHFSQPSERCPPLAVLHTITS-GVCFK 284
           +VY+GEM +GEV +Y +E+K     +++KEIR +HFSQPSERCPPLAVLHTITS G+CFK
Sbjct: 5   MVYHGEMAVGEVKIYPEENK----NMDLKEIRISHFSQPSERCPPLAVLHTITSFGICFK 60

Query: 285 M 287
           M
Sbjct: 61  M 61


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 960

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/66 (63%), Positives = 51/66 (77%), Gaps = 6/66 (9%)
 Frame = +3

Query: 108 VVYYGEMVLGEVDVYGDEDKWKKDL-----LNMKEIRTTHFSQPSERCPPLAVLHTITS- 269
           VVY GE+V+GEVDVY +E+    +       ++KEIR +HFSQPSERCPPLAVLHT+TS 
Sbjct: 5   VVYQGEVVVGEVDVYPEENNNNNNKNYNKNFHVKEIRISHFSQPSERCPPLAVLHTVTSC 64

Query: 270 GVCFKM 287
           GVCFKM
Sbjct: 65  GVCFKM 70


>ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Cucumis sativus]
           gi|449479317|ref|XP_004155567.1| PREDICTED: LOW QUALITY
           PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 1-like [Cucumis sativus]
          Length = 803

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/61 (63%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
 Frame = +3

Query: 108 VVYYGEMVLGEVDVYGDEDKWKKDLLNMKEIRTTHFSQPSERCPPLAVLHTI-TSGVCFK 284
           VVY+G+ +LG+V++Y +E    K++  +KEIR THFSQPSERCPPLAVLHTI  SG+CFK
Sbjct: 5   VVYHGDELLGDVEIYPEEKNGYKNI-EVKEIRITHFSQPSERCPPLAVLHTIAASGICFK 63

Query: 285 M 287
           M
Sbjct: 64  M 64