BLASTX nr result

ID: Glycyrrhiza24_contig00023280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023280
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_717118.1| NADH dehydrogenase subunit 4L [Brassica napus] ...    99   3e-19
ref|YP_005090483.1| NADH dehydrogenase subunit 4L (mitochondrion...    99   3e-19
ref|YP_005090442.1| NADH dehydrogenase subunit 4L (mitochondrion...    98   8e-19
ref|YP_002000583.1| NADH dehydrogenase subunit 4L [Oryza sativa ...    97   1e-18
ref|NP_063995.2| nad4L gene product (mitochondrion) [Beta vulgar...    97   1e-18

>ref|YP_717118.1| NADH dehydrogenase subunit 4L [Brassica napus]
           gi|37591064|dbj|BAC98866.1| NADH dehydrogenase subunit
           4L [Brassica napus]
          Length = 100

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 61/100 (61%), Positives = 61/100 (61%)
 Frame = -3

Query: 336 MDLIKYFTFSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVNLNFLVFSVSLDDMMGQX 157
           MDLIKYFTFSM                            LAVNLNFLVFSVSLDDMMGQ 
Sbjct: 1   MDLIKYFTFSMIIFILGIWGILLNRRNILIMLMSIELMLLAVNLNFLVFSVSLDDMMGQV 60

Query: 156 XXXXXXXXXXAESAIGLAIFVITFRVRGTIAVEFINSIQG 37
                     AESAIGLAIFVITFRVRGTIAVEFINSIQG
Sbjct: 61  FASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG 100


>ref|YP_005090483.1| NADH dehydrogenase subunit 4L (mitochondrion) [Lotus japonicus]
           gi|316996007|dbj|BAD83453.2| NADH dehydrogenase subunit
           4L (mitochondrion) [Nicotiana tabacum]
           gi|357197347|gb|AET62943.1| NADH dehydrogenase subunit
           4L (mitochondrion) [Lotus japonicus]
           gi|388490750|gb|AFK33441.1| unknown [Lotus japonicus]
          Length = 100

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 61/100 (61%), Positives = 61/100 (61%)
 Frame = -3

Query: 336 MDLIKYFTFSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVNLNFLVFSVSLDDMMGQX 157
           MDLIKYFTFSM                            LAVNLNFLVFSVSLDDMMGQ 
Sbjct: 1   MDLIKYFTFSMIIFILGIWGILLNRRNILIMLMSIELMLLAVNLNFLVFSVSLDDMMGQL 60

Query: 156 XXXXXXXXXXAESAIGLAIFVITFRVRGTIAVEFINSIQG 37
                     AESAIGLAIFVITFRVRGTIAVEFINSIQG
Sbjct: 61  FALLVLTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG 100


>ref|YP_005090442.1| NADH dehydrogenase subunit 4L (mitochondrion) [Millettia pinnata]
           gi|357197305|gb|AET62902.1| NADH dehydrogenase subunit
           4L (mitochondrion) [Millettia pinnata]
          Length = 100

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 60/100 (60%), Positives = 60/100 (60%)
 Frame = -3

Query: 336 MDLIKYFTFSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVNLNFLVFSVSLDDMMGQX 157
           MDLIKYFTFSM                            LAVN NFLVFSVSLDDMMGQ 
Sbjct: 1   MDLIKYFTFSMIIFILGIWGILLNRRNILIMLMSIELMLLAVNFNFLVFSVSLDDMMGQL 60

Query: 156 XXXXXXXXXXAESAIGLAIFVITFRVRGTIAVEFINSIQG 37
                     AESAIGLAIFVITFRVRGTIAVEFINSIQG
Sbjct: 61  FALLVLTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG 100


>ref|YP_002000583.1| NADH dehydrogenase subunit 4L [Oryza sativa Japonica Group]
           gi|23495407|dbj|BAC19888.1| NADH dehydrogenase subunit
           4L [Oryza sativa Japonica Group]
          Length = 100

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 60/100 (60%), Positives = 60/100 (60%)
 Frame = -3

Query: 336 MDLIKYFTFSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVNLNFLVFSVSLDDMMGQX 157
           MDLIKYFTFSM                            LAVNLNFLVFSVSLDDMMGQ 
Sbjct: 1   MDLIKYFTFSMIIFILGIWGILLNRRNILIMLMSIELMLLAVNLNFLVFSVSLDDMMGQL 60

Query: 156 XXXXXXXXXXAESAIGLAIFVITFRVRGTIAVEFINSIQG 37
                     AESAIGLAIFVITFRVRGTIAVEFIN IQG
Sbjct: 61  FALLVLTVAAAESAIGLAIFVITFRVRGTIAVEFINCIQG 100


>ref|NP_063995.2| nad4L gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|307101735|ref|YP_003875507.1| NADH dehydrogenase
           subunit 4L [Silene latifolia]
           gi|323435161|ref|YP_004222379.1| NADH dehydrogenase
           subunit 4L [Beta vulgaris subsp. maritima]
           gi|346683253|ref|YP_004842185.1| NADH dehydrogenase
           subunit 4L [Beta macrocarpa] gi|7592784|dbj|BAA94420.1|
           NADH dehydrogenase subunit 4L [Beta vulgaris subsp.
           vulgaris] gi|148491416|dbj|BAA99307.2| NADH
           dehydrogenase subunit 4L [Beta vulgaris subsp. vulgaris]
           gi|296040769|gb|ADG85352.1| NADH dehydrogenase subunit
           4L [Silene latifolia] gi|301338030|gb|ADK73322.1| NADH
           dehydrogenase subunit 4L [Silene latifolia]
           gi|317905612|emb|CBJ14017.1| NADH dehydrogenase subunit
           4L [Beta vulgaris subsp. maritima]
           gi|317905645|emb|CBJ14045.1| NADH dehydrogenase subunit
           4L [Beta vulgaris subsp. maritima]
           gi|319439894|emb|CBJ17593.1| NADH dehydrogenase subunit
           4L [Beta vulgaris subsp. maritima]
           gi|345500171|emb|CBX24990.1| NADH dehydrogenase subunit
           4L [Beta macrocarpa] gi|384977903|emb|CBL54127.1| NADH
           dehydrogenase subunit 4L (mitochondrion) [Beta vulgaris
           subsp. maritima]
          Length = 100

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 60/100 (60%), Positives = 60/100 (60%)
 Frame = -3

Query: 336 MDLIKYFTFSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVNLNFLVFSVSLDDMMGQX 157
           MD IKYFTFSM                            LAVNLNFLVFSVSLDDMMGQ 
Sbjct: 1   MDSIKYFTFSMIIFILGIWGILLNRRNILIMLMSIELMLLAVNLNFLVFSVSLDDMMGQL 60

Query: 156 XXXXXXXXXXAESAIGLAIFVITFRVRGTIAVEFINSIQG 37
                     AESAIGLAIFVITFRVRGTIAVEFINSIQG
Sbjct: 61  FALLVLTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG 100


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