BLASTX nr result

ID: Glycyrrhiza24_contig00023258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023258
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240906.1| uncharacterized protein LOC100778880 [Glycin...   238   8e-61
gb|AFK41717.1| unknown [Lotus japonicus]                              235   4e-60
ref|XP_003605424.1| Queuine tRNA-ribosyltransferase [Medicago tr...   197   9e-49
ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase s...   186   2e-45
emb|CBI31361.3| unnamed protein product [Vitis vinifera]              185   5e-45

>ref|NP_001240906.1| uncharacterized protein LOC100778880 [Glycine max]
           gi|255634786|gb|ACU17754.1| unknown [Glycine max]
          Length = 401

 Score =  238 bits (606), Expect = 8e-61
 Identities = 114/133 (85%), Positives = 122/133 (91%)
 Frame = +2

Query: 2   FDSTYIHSLTLGGFALTFSMDKNGNQDNFQLSQIGSELTKINLRATVYRKDMSPILGDCT 181
           FDSTYI+SLTLGGFALTFS+DK GNQ NFQ SQIGS+LTKINLRA VYRKDMSPILG+C 
Sbjct: 269 FDSTYIYSLTLGGFALTFSLDKGGNQYNFQKSQIGSDLTKINLRAKVYRKDMSPILGNCI 328

Query: 182 CYTCQNHTKAYINHLFNVHEMLAQTLLEIHNTHHYLRFFRVIREAIQDGRFERFRQTFIE 361
           CYTCQNHTKAYINHLFNVHEMLAQ LLEIHNTHHYL FF VIRE+I+DGRFE+FRQTFIE
Sbjct: 329 CYTCQNHTKAYINHLFNVHEMLAQILLEIHNTHHYLTFFHVIRESIKDGRFEKFRQTFIE 388

Query: 362 SRRMHFEREAISA 400
           SRR H EREA+ A
Sbjct: 389 SRRAHQEREAVCA 401


>gb|AFK41717.1| unknown [Lotus japonicus]
          Length = 146

 Score =  235 bits (600), Expect = 4e-60
 Identities = 109/125 (87%), Positives = 119/125 (95%)
 Frame = +2

Query: 2   FDSTYIHSLTLGGFALTFSMDKNGNQDNFQLSQIGSELTKINLRATVYRKDMSPILGDCT 181
           FDSTYI+SLTLGGFALTFS+DKNGNQD+F LSQIGS+LTKINLRAT YRKDMSPILG+C+
Sbjct: 22  FDSTYIYSLTLGGFALTFSLDKNGNQDHFHLSQIGSDLTKINLRATAYRKDMSPILGNCS 81

Query: 182 CYTCQNHTKAYINHLFNVHEMLAQTLLEIHNTHHYLRFFRVIREAIQDGRFERFRQTFIE 361
           CYTCQNHTK YINHLFNVHEMLAQ L+EIHNTHHYL+FF  IREAI+DGRFERFRQTFIE
Sbjct: 82  CYTCQNHTKVYINHLFNVHEMLAQILVEIHNTHHYLKFFHAIREAIRDGRFERFRQTFIE 141

Query: 362 SRRMH 376
           SRR+H
Sbjct: 142 SRRLH 146


>ref|XP_003605424.1| Queuine tRNA-ribosyltransferase [Medicago truncatula]
           gi|355506479|gb|AES87621.1| Queuine
           tRNA-ribosyltransferase [Medicago truncatula]
          Length = 389

 Score =  197 bits (502), Expect = 9e-49
 Identities = 95/131 (72%), Positives = 109/131 (83%)
 Frame = +2

Query: 2   FDSTYIHSLTLGGFALTFSMDKNGNQDNFQLSQIGSELTKINLRATVYRKDMSPILGDCT 181
           FDS+YI++LTLGGFALTFS+DKNGNQDNF+LSQ GS+ TKINLRAT YR DMSPI+  C+
Sbjct: 266 FDSSYIYTLTLGGFALTFSLDKNGNQDNFKLSQRGSDSTKINLRATEYRLDMSPIVDGCS 325

Query: 182 CYTCQNHTKAYINHLFNVHEMLAQTLLEIHNTHHYLRFFRVIREAIQDGRFERFRQTFIE 361
           C+TCQN+TKAYINHL+NVH        EIHN HHYLRFFRVIREAIQDGRFE +R TF  
Sbjct: 326 CHTCQNYTKAYINHLYNVH--------EIHNAHHYLRFFRVIREAIQDGRFEEYRLTFTN 377

Query: 362 SRRMHFEREAI 394
           SRR H+ R A+
Sbjct: 378 SRREHYGRVAV 388


>ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1 [Vitis
           vinifera]
          Length = 399

 Score =  186 bits (473), Expect = 2e-45
 Identities = 89/134 (66%), Positives = 108/134 (80%), Gaps = 1/134 (0%)
 Frame = +2

Query: 2   FDSTYIHSLTLGGFALTFSMDK-NGNQDNFQLSQIGSELTKINLRATVYRKDMSPILGDC 178
           FDSTYI+ LTLGGFALTF ++    ++ + +LS +GS+ TKINLRAT+YRKD +PI+ +C
Sbjct: 264 FDSTYIYHLTLGGFALTFPLESIQRHEFDSRLSDVGSDHTKINLRATIYRKDTAPIVDNC 323

Query: 179 TCYTCQNHTKAYINHLFNVHEMLAQTLLEIHNTHHYLRFFRVIREAIQDGRFERFRQTFI 358
            CYTCQNHT+AYINHL NVHEMLAQ LLEIHNTHHYL FFR IR AI++  FE+FRQTFI
Sbjct: 324 NCYTCQNHTRAYINHLLNVHEMLAQILLEIHNTHHYLGFFRSIRTAIKEDNFEQFRQTFI 383

Query: 359 ESRRMHFEREAISA 400
           +SRR H    A+ A
Sbjct: 384 DSRREHLNMTAVCA 397


>emb|CBI31361.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score =  185 bits (470), Expect = 5e-45
 Identities = 88/133 (66%), Positives = 108/133 (81%), Gaps = 1/133 (0%)
 Frame = +2

Query: 2   FDSTYIHSLTLGGFALTFSMDK-NGNQDNFQLSQIGSELTKINLRATVYRKDMSPILGDC 178
           FDSTYI+ LTLGGFALTF ++    ++ + +LS +GS+ TKINLRAT+YRKD +PI+ +C
Sbjct: 264 FDSTYIYHLTLGGFALTFPLESIQRHEFDSRLSDVGSDHTKINLRATIYRKDTAPIVDNC 323

Query: 179 TCYTCQNHTKAYINHLFNVHEMLAQTLLEIHNTHHYLRFFRVIREAIQDGRFERFRQTFI 358
            CYTCQNHT+AYINHL NVHEMLAQ LLEIHNTHHYL FFR IR AI++  FE+FRQTFI
Sbjct: 324 NCYTCQNHTRAYINHLLNVHEMLAQILLEIHNTHHYLGFFRSIRTAIKEDNFEQFRQTFI 383

Query: 359 ESRRMHFEREAIS 397
           +SRR H    A++
Sbjct: 384 DSRREHLNMTALN 396


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