BLASTX nr result

ID: Glycyrrhiza24_contig00023255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023255
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236697.1| uncharacterized protein LOC100500605 [Glycin...   128   7e-28
gb|ABD64980.1| hypothetical protein 25.t00029 [Brassica oleracea]      69   5e-10
emb|CBI41073.3| unnamed protein product [Vitis vinifera]               68   1e-09
ref|XP_003635125.1| PREDICTED: uncharacterized protein LOC100248...    67   2e-09
ref|XP_002534616.1| conserved hypothetical protein [Ricinus comm...    66   6e-09

>ref|NP_001236697.1| uncharacterized protein LOC100500605 [Glycine max]
           gi|255630740|gb|ACU15731.1| unknown [Glycine max]
          Length = 94

 Score =  128 bits (322), Expect = 7e-28
 Identities = 72/93 (77%), Positives = 78/93 (83%), Gaps = 4/93 (4%)
 Frame = +3

Query: 78  MAS-SYCTRHLISLSSLKSAVRPISHSPLLNASAATVSHRRFSPIIR---YRLGSVQSLL 245
           MAS S+CTR  ISLSS+KSAVR ISHSPLLNA   TV HR FSP+IR   YRLGSVQSLL
Sbjct: 1   MASFSHCTRRFISLSSMKSAVRTISHSPLLNA---TVPHRPFSPLIRTCVYRLGSVQSLL 57

Query: 246 PLHSTVATARMVSFLSIDSRSCQAVSQVTLCCN 344
           PLHSTVATARMVS LSIDSR+C+A+S  TLCCN
Sbjct: 58  PLHSTVATARMVSSLSIDSRNCEALSHATLCCN 90


>gb|ABD64980.1| hypothetical protein 25.t00029 [Brassica oleracea]
          Length = 109

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 16/104 (15%)
 Frame = +3

Query: 78  MASSYCTRHL--ISLSSLKSAVRPISH-SPLLNASAATVSHRRF--------SPIIRY-- 218
           MAS+ C R +   S+SSL+SA+R   H SP+   +  + S   F        SP   +  
Sbjct: 1   MASACCNRFMNRSSVSSLRSAIRSALHKSPVGTGTPPSASSAGFRIPSKPAASPRFSFSR 60

Query: 219 ---RLGSVQSLLPLHSTVATARMVSFLSIDSRSCQAVSQVTLCC 341
               LG VQSLLPLHSTVA AR+ S LS+ SRS +A+SQ TLCC
Sbjct: 61  CPSELGCVQSLLPLHSTVAAARLTSCLSVTSRSSRALSQGTLCC 104


>emb|CBI41073.3| unnamed protein product [Vitis vinifera]
          Length = 108

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 50/103 (48%), Positives = 59/103 (57%), Gaps = 16/103 (15%)
 Frame = +3

Query: 78  MASSYCTRHL--ISLSSLKSAVRPISHSPLLNASAATVSH-------------RRFSPI- 209
           MASS C R +   SLS++KSA+R    +  +N SA   S              RRFS   
Sbjct: 1   MASS-CNRFVSRASLSAVKSAIRANGRTASVNRSATPTSSPFPLPSRSTVSPLRRFSSSR 59

Query: 210 IRYRLGSVQSLLPLHSTVATARMVSFLSIDSRSCQAVSQVTLC 338
            R  LG +QSLLPLHS VA ARM S LS  SRSC+A+SQ TLC
Sbjct: 60  TRGELGCIQSLLPLHSAVAAARMTSCLSSTSRSCKALSQGTLC 102


>ref|XP_003635125.1| PREDICTED: uncharacterized protein LOC100248900 isoform 2 [Vitis
           vinifera] gi|359495980|ref|XP_002272938.2| PREDICTED:
           uncharacterized protein LOC100248900 isoform 1 [Vitis
           vinifera] gi|297744382|emb|CBI37356.3| unnamed protein
           product [Vitis vinifera]
          Length = 108

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 50/103 (48%), Positives = 59/103 (57%), Gaps = 16/103 (15%)
 Frame = +3

Query: 78  MASSYCTRHL--ISLSSLKSAVRPISHSPLLNASAATVSH-------------RRFSPI- 209
           MASS C R +   SLS++KSA+R    +  +N SA   S              RRFS   
Sbjct: 1   MASS-CNRFVSRASLSAVKSAIRANGRTASVNRSATPTSSPFPLPSRSTVSPLRRFSSSR 59

Query: 210 IRYRLGSVQSLLPLHSTVATARMVSFLSIDSRSCQAVSQVTLC 338
            R  LG +QSLLPLHS VA ARM S LS  SRSC+A+SQ TLC
Sbjct: 60  TRGVLGCIQSLLPLHSAVAAARMTSCLSSTSRSCKALSQGTLC 102


>ref|XP_002534616.1| conserved hypothetical protein [Ricinus communis]
           gi|223524903|gb|EEF27767.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 94

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 49/95 (51%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
 Frame = +3

Query: 78  MASSYCTRHLI--SLSSLKSAVR--------PISHSPLLNASAATVSHRRFSPIIRYRLG 227
           MASS C R +   SLSS+KSA+R        P S SP    SA+      FS      LG
Sbjct: 1   MASS-CRRFISKSSLSSIKSAIRSNAPKSPSPSSSSPSSLPSASLPRRFSFSSRAPCELG 59

Query: 228 SVQSLLPLHSTVATARMVSFLSIDSRSCQAVSQVT 332
            VQSLLPLHS VA ARM S LS  SRSC+A+SQ T
Sbjct: 60  CVQSLLPLHSAVAVARMTSCLSTTSRSCRALSQGT 94


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