BLASTX nr result

ID: Glycyrrhiza24_contig00023254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023254
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520054.1| PREDICTED: putative nuclear matrix constitue...   127   9e-28
ref|XP_002278531.2| PREDICTED: putative nuclear matrix constitue...    65   4e-09
emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]    65   4e-09
ref|XP_003626461.1| hypothetical protein MTR_7g116170 [Medicago ...    61   1e-07

>ref|XP_003520054.1| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Glycine max]
          Length = 1210

 Score =  127 bits (319), Expect = 9e-28
 Identities = 65/92 (70%), Positives = 73/92 (79%), Gaps = 2/92 (2%)
 Frame = +3

Query: 3    VRPVSWLRKCTSKIFNLSPSKRTDAVSTSDMVGTSPLSDVNVNIEKVDR--PASSPNIEG 176
            V+PVSWLRKCT+KIFNLSPSKR DAV   DM GTSPLSDVN ++E +D   P S PNI G
Sbjct: 818  VKPVSWLRKCTTKIFNLSPSKRADAVGALDMPGTSPLSDVNFSVENIDEELPTSLPNI-G 876

Query: 177  ARVILQERQQAGGMAHHSLDTPYPQTDNIVRE 272
            ARVI  ERQ AGGMAHHS DTP+ Q+DNI +E
Sbjct: 877  ARVIFDERQPAGGMAHHSSDTPHLQSDNIGKE 908


>ref|XP_002278531.2| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Vitis vinifera]
          Length = 1213

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/87 (40%), Positives = 54/87 (62%)
 Frame = +3

Query: 12   VSWLRKCTSKIFNLSPSKRTDAVSTSDMVGTSPLSDVNVNIEKVDRPASSPNIEGARVIL 191
            +S+LRKC +KIFNLSPSK+++ V    +   SPL D+ VN+EK    A  P+I G  +  
Sbjct: 820  MSFLRKCATKIFNLSPSKKSEHVGVQVLREESPLLDLQVNLEK----AEGPSIVGQSIAE 875

Query: 192  QERQQAGGMAHHSLDTPYPQTDNIVRE 272
             E + + G+A+ S D     +D+++RE
Sbjct: 876  DELEPSFGIANDSFDIQQLHSDSVMRE 902


>emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]
          Length = 1234

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/87 (40%), Positives = 54/87 (62%)
 Frame = +3

Query: 12   VSWLRKCTSKIFNLSPSKRTDAVSTSDMVGTSPLSDVNVNIEKVDRPASSPNIEGARVIL 191
            +S+LRKC +KIFNLSPSK+++ V    +   SPL D+ VN+EK    A  P+I G  +  
Sbjct: 857  MSFLRKCATKIFNLSPSKKSEHVGVQVLREESPLLDLQVNLEK----AEGPSIVGQSIAE 912

Query: 192  QERQQAGGMAHHSLDTPYPQTDNIVRE 272
             E + + G+A+ S D     +D+++RE
Sbjct: 913  DELEPSFGIANDSFDIQQLHSDSVMRE 939


>ref|XP_003626461.1| hypothetical protein MTR_7g116170 [Medicago truncatula]
           gi|355501476|gb|AES82679.1| hypothetical protein
           MTR_7g116170 [Medicago truncatula]
          Length = 206

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/60 (60%), Positives = 40/60 (66%)
 Frame = +3

Query: 93  MVGTSPLSDVNVNIEKVDRPASSPNIEGARVILQERQQAGGMAHHSLDTPYPQTDNIVRE 272
           M  TS  SDVN  IEKV  PASSPNIEG  + LQERQ   GMA H+ DT + Q DNI R+
Sbjct: 1   MAETSLESDVN--IEKVKEPASSPNIEGPLITLQERQIDDGMALHASDTAHLQCDNIPRK 58


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