BLASTX nr result

ID: Glycyrrhiza24_contig00023246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023246
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624339.1| Pentatricopeptide repeat-containing protein ...   306   1e-81
ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containi...   303   1e-80
gb|ACU18704.1| unknown [Glycine max]                                  301   7e-80
ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|2...   248   4e-64
ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containi...   247   1e-63

>ref|XP_003624339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499354|gb|AES80557.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 578

 Score =  306 bits (785), Expect = 1e-81
 Identities = 150/190 (78%), Positives = 164/190 (86%)
 Frame = -2

Query: 570 VIKALCEHRRVEETSDLFGRMLALGLRPKLDVYNSVISMLCKLGNLEHAMRVFETMNKNR 391
           VIKALC+HRRVEE   LFGRML +GL+PKL VYNSVISMLCKLG+L++A  VFE MNKNR
Sbjct: 382 VIKALCDHRRVEEAGKLFGRMLEIGLKPKLVVYNSVISMLCKLGDLDNANGVFEIMNKNR 441

Query: 390 CLPDSLTYIALIHAHGGCKNWKVAYELLMEMLGYGSIPHFHTYNIVDSLLREHDQLDLCL 211
           C PDS+TYIALIHA   CKNWKVAYELLMEMLG G IPHFHTYN+VDSLLREHDQLDLC 
Sbjct: 442 CFPDSITYIALIHAQCACKNWKVAYELLMEMLGLGWIPHFHTYNLVDSLLREHDQLDLCH 501

Query: 210 KLERKFENQKLQKLCKVGELDAAYEKVKSMLEKGIPLSAYARDTFEHVLQKCGRLKIAHQ 31
           KLERK ENQKL KLCK G+L  AYEKVK+MLEKG+ LSAYARDTFEH  QKCG+L+IAH 
Sbjct: 502 KLERKLENQKLLKLCKEGQLGDAYEKVKAMLEKGVRLSAYARDTFEHEFQKCGKLEIAHD 561

Query: 30  LLENTQRVHE 1
           LLE T+RV E
Sbjct: 562 LLEKTRRVQE 571


>ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 367

 Score =  303 bits (776), Expect = 1e-80
 Identities = 148/190 (77%), Positives = 164/190 (86%)
 Frame = -2

Query: 570 VIKALCEHRRVEETSDLFGRMLALGLRPKLDVYNSVISMLCKLGNLEHAMRVFETMNKNR 391
           VI ALCE  RVEE SDLFGRML+ GL+PKL VYNSVISMLCK G L+ A RVFE MNKNR
Sbjct: 171 VINALCECCRVEEASDLFGRMLSCGLKPKLVVYNSVISMLCKFGKLKDATRVFEIMNKNR 230

Query: 390 CLPDSLTYIALIHAHGGCKNWKVAYELLMEMLGYGSIPHFHTYNIVDSLLREHDQLDLCL 211
           CLPD LTY ALIH+HG  +NWKV+Y+LLMEMLG G IPHFHT+N+V+SLLREHDQLDLC+
Sbjct: 231 CLPDGLTYTALIHSHGEVRNWKVSYDLLMEMLGLGWIPHFHTFNLVESLLREHDQLDLCV 290

Query: 210 KLERKFENQKLQKLCKVGELDAAYEKVKSMLEKGIPLSAYARDTFEHVLQKCGRLKIAHQ 31
           KLERK ENQKLQKLCK GELDAAYEK +SMLEKGIPLSAYARD F+ V QKCG++KIA Q
Sbjct: 291 KLERKLENQKLQKLCKGGELDAAYEKAQSMLEKGIPLSAYARDIFQQVFQKCGKIKIARQ 350

Query: 30  LLENTQRVHE 1
           LLE T+RV E
Sbjct: 351 LLEKTERVQE 360


>gb|ACU18704.1| unknown [Glycine max]
          Length = 367

 Score =  301 bits (770), Expect = 7e-80
 Identities = 147/190 (77%), Positives = 163/190 (85%)
 Frame = -2

Query: 570 VIKALCEHRRVEETSDLFGRMLALGLRPKLDVYNSVISMLCKLGNLEHAMRVFETMNKNR 391
           VI ALCE  RVEE SDLFGRML+ GL+PKL VYNSVISMLCK G L+ A RVFE MNKNR
Sbjct: 171 VINALCECCRVEEASDLFGRMLSCGLKPKLVVYNSVISMLCKFGKLKDATRVFEIMNKNR 230

Query: 390 CLPDSLTYIALIHAHGGCKNWKVAYELLMEMLGYGSIPHFHTYNIVDSLLREHDQLDLCL 211
           CLPD LTY ALIH+HG  +NWKV+Y+LLMEMLG G IPHFHT+N+V+SLLREH QLDLC+
Sbjct: 231 CLPDGLTYTALIHSHGEVRNWKVSYDLLMEMLGLGWIPHFHTFNLVESLLREHGQLDLCV 290

Query: 210 KLERKFENQKLQKLCKVGELDAAYEKVKSMLEKGIPLSAYARDTFEHVLQKCGRLKIAHQ 31
           KLERK ENQKLQKLCK GELDAAYEK +SMLEKGIPLSAYARD F+ V QKCG++KIA Q
Sbjct: 291 KLERKLENQKLQKLCKGGELDAAYEKARSMLEKGIPLSAYARDIFQQVFQKCGKIKIARQ 350

Query: 30  LLENTQRVHE 1
           LLE T+RV E
Sbjct: 351 LLEKTERVQE 360


>ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|222837367|gb|EEE75746.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score =  248 bits (634), Expect = 4e-64
 Identities = 120/190 (63%), Positives = 148/190 (77%)
 Frame = -2

Query: 570 VIKALCEHRRVEETSDLFGRMLALGLRPKLDVYNSVISMLCKLGNLEHAMRVFETMNKNR 391
           V++ALCE+R VEE S LFGRML+L L+PKL VYNS+I MLCK+G L+ A RVF+ M+K R
Sbjct: 286 VMQALCEYRLVEEASHLFGRMLSLELKPKLVVYNSIICMLCKVGRLDDAQRVFQIMSKKR 345

Query: 390 CLPDSLTYIALIHAHGGCKNWKVAYELLMEMLGYGSIPHFHTYNIVDSLLREHDQLDLCL 211
           CLPDS+TY AL+HA+G  +NW+VAY+LLMEMLG G IPHFH Y +VD LLREH ++DL  
Sbjct: 346 CLPDSVTYTALVHAYGEARNWEVAYDLLMEMLGLGWIPHFHAYTLVDKLLREHGRIDLSN 405

Query: 210 KLERKFENQKLQKLCKVGELDAAYEKVKSMLEKGIPLSAYARDTFEHVLQKCGRLKIAHQ 31
           KLERK E+Q L K CK G+L+AAYEK++SMLEKG     Y RD FEH  QK G+L+IA +
Sbjct: 406 KLERKLESQILHKHCKAGQLEAAYEKLRSMLEKGFYPPMYVRDAFEHAFQKYGKLEIARE 465

Query: 30  LLENTQRVHE 1
           LLEN  +  E
Sbjct: 466 LLENMDKACE 475


>ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449484825|ref|XP_004156991.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 579

 Score =  247 bits (630), Expect = 1e-63
 Identities = 120/190 (63%), Positives = 143/190 (75%)
 Frame = -2

Query: 570 VIKALCEHRRVEETSDLFGRMLALGLRPKLDVYNSVISMLCKLGNLEHAMRVFETMNKNR 391
           V+KALCEHR V+E SDLFGRML+ G++PKL +YN VI MLCKLGNL+ A RVF  MNK R
Sbjct: 381 VMKALCEHRHVDEASDLFGRMLSQGMKPKLAIYNYVICMLCKLGNLDSAERVFGIMNKKR 440

Query: 390 CLPDSLTYIALIHAHGGCKNWKVAYELLMEMLGYGSIPHFHTYNIVDSLLREHDQLDLCL 211
           C PD +TY ALIHA+G  ++W  AY LL EML  G  PHFH Y+IVD L+REH Q+DLCL
Sbjct: 441 CAPDHVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHFHVYSIVDKLMREHGQIDLCL 500

Query: 210 KLERKFENQKLQKLCKVGELDAAYEKVKSMLEKGIPLSAYARDTFEHVLQKCGRLKIAHQ 31
           KLE K+E Q LQKLCK G+L+AAYEK+KSMLEKG+    Y RD FE   QK G+ KIA +
Sbjct: 501 KLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIYVRDAFESAFQKKGKFKIARE 560

Query: 30  LLENTQRVHE 1
           LL+    VH+
Sbjct: 561 LLQKMDGVHQ 570


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