BLASTX nr result

ID: Glycyrrhiza24_contig00023244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023244
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519208.1| PREDICTED: serine hydroxymethyltransferase, ...   244   4e-63
ref|XP_003544839.1| PREDICTED: serine hydroxymethyltransferase, ...   243   1e-62
sp|P34899.1|GLYM_PEA RecName: Full=Serine hydroxymethyltransfera...   242   2e-62
ref|XP_004160122.1| PREDICTED: LOW QUALITY PROTEIN: serine hydro...   241   3e-62
ref|XP_004143436.1| PREDICTED: serine hydroxymethyltransferase, ...   241   3e-62

>ref|XP_003519208.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
           [Glycine max]
          Length = 514

 Score =  244 bits (624), Expect = 4e-63
 Identities = 119/124 (95%), Positives = 121/124 (97%)
 Frame = +3

Query: 9   IKQLNEPLEVVDPEITDIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYP 188
           IKQLN+PLE +DPEI DIIELEKARQWKG ELIPSENFTSLSVMQAVGSVMTNKYSEGYP
Sbjct: 45  IKQLNDPLETIDPEIADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYP 104

Query: 189 GARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERI 368
           GARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERI
Sbjct: 105 GARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERI 164

Query: 369 MALD 380
           MALD
Sbjct: 165 MALD 168


>ref|XP_003544839.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
           [Glycine max]
          Length = 507

 Score =  243 bits (620), Expect = 1e-62
 Identities = 118/124 (95%), Positives = 121/124 (97%)
 Frame = +3

Query: 9   IKQLNEPLEVVDPEITDIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYP 188
           IKQLN+PLE +DPEI DIIELEKARQWKG ELIPSENFTSLSVMQAVGSVMTNKYSEGYP
Sbjct: 38  IKQLNDPLEAIDPEIADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYP 97

Query: 189 GARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERI 368
           GARYYGGNEYIDMAETLCQKRALEAF+LDPAKWGVNVQSLSGSPSNFQVYTALLKPHERI
Sbjct: 98  GARYYGGNEYIDMAETLCQKRALEAFQLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERI 157

Query: 369 MALD 380
           MALD
Sbjct: 158 MALD 161


>sp|P34899.1|GLYM_PEA RecName: Full=Serine hydroxymethyltransferase, mitochondrial;
           Short=SHMT; AltName: Full=Glycine
           hydroxymethyltransferase; AltName: Full=Serine
           methylase; Flags: Precursor gi|169158|gb|AAA33687.1|
           serine hydroxymethyltransferase [Pisum sativum]
          Length = 518

 Score =  242 bits (618), Expect = 2e-62
 Identities = 118/123 (95%), Positives = 120/123 (97%)
 Frame = +3

Query: 12  KQLNEPLEVVDPEITDIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPG 191
           KQLN PLEV+DPEI DIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPG
Sbjct: 50  KQLNSPLEVIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPG 109

Query: 192 ARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIM 371
           ARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQ LSGSPSNFQVYTALLKPH+RIM
Sbjct: 110 ARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIM 169

Query: 372 ALD 380
           ALD
Sbjct: 170 ALD 172


>ref|XP_004160122.1| PREDICTED: LOW QUALITY PROTEIN: serine hydroxymethyltransferase,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  241 bits (616), Expect = 3e-62
 Identities = 117/123 (95%), Positives = 121/123 (98%)
 Frame = +3

Query: 12  KQLNEPLEVVDPEITDIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPG 191
           KQLN+PLEV+DPEI DIIELEKARQWKGLELIPSENFTS+SVMQAVGSVMTNKYSEGYPG
Sbjct: 51  KQLNDPLEVIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 110

Query: 192 ARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIM 371
           ARYYGGNEYIDMAE+LCQKRALEAFRLDP KWGVNVQSLSGSPSNFQVYTALLKPHERIM
Sbjct: 111 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHERIM 170

Query: 372 ALD 380
           ALD
Sbjct: 171 ALD 173


>ref|XP_004143436.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
           [Cucumis sativus]
          Length = 519

 Score =  241 bits (616), Expect = 3e-62
 Identities = 117/123 (95%), Positives = 121/123 (98%)
 Frame = +3

Query: 12  KQLNEPLEVVDPEITDIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPG 191
           KQLN+PLEV+DPEI DIIELEKARQWKGLELIPSENFTS+SVMQAVGSVMTNKYSEGYPG
Sbjct: 51  KQLNDPLEVIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 110

Query: 192 ARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIM 371
           ARYYGGNEYIDMAE+LCQKRALEAFRLDP KWGVNVQSLSGSPSNFQVYTALLKPHERIM
Sbjct: 111 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHERIM 170

Query: 372 ALD 380
           ALD
Sbjct: 171 ALD 173


Top