BLASTX nr result

ID: Glycyrrhiza24_contig00023239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023239
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627583.1| hypothetical protein MTR_8g030800, partial [...   164   9e-39
ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806...   163   2e-38
ref|XP_003623963.1| Mediator of RNA polymerase II transcription ...   159   2e-37
ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781...   155   4e-36
ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782...   154   9e-36

>ref|XP_003627583.1| hypothetical protein MTR_8g030800, partial [Medicago truncatula]
           gi|355521605|gb|AET02059.1| hypothetical protein
           MTR_8g030800, partial [Medicago truncatula]
          Length = 1823

 Score =  164 bits (414), Expect = 9e-39
 Identities = 78/92 (84%), Positives = 84/92 (91%)
 Frame = +1

Query: 1   SVSDGQESSLHFRWWYIVRLLQWHHAEGLILPSLVIDWVLNQLQEKELLEACQLLLPIIY 180
           S S G+E S HFRWWYIVRLLQWHHAEGLILPSLVIDWVLNQLQEK+LLE  +LLLPIIY
Sbjct: 464 SFSAGEEPSSHFRWWYIVRLLQWHHAEGLILPSLVIDWVLNQLQEKDLLEVWELLLPIIY 523

Query: 181 GFLEIVVLSQTYVRTLAGIALRVIRDPAPGGS 276
           GFLEI+VLSQ+YVR LAG+ LRVIRDPAPGGS
Sbjct: 524 GFLEIIVLSQSYVRALAGLTLRVIRDPAPGGS 555


>ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806985 [Glycine max]
          Length = 2279

 Score =  163 bits (412), Expect = 2e-38
 Identities = 80/105 (76%), Positives = 88/105 (83%), Gaps = 13/105 (12%)
 Frame = +1

Query: 1   SVSDGQESSLHFRWWYIVRLLQWHHAEGLILPSLVIDWVLNQL-------------QEKE 141
           SV+DG+E SLHFRWWYIVRLLQWHHAEGL+LPSL+IDWVL QL             QEK+
Sbjct: 297 SVADGEEPSLHFRWWYIVRLLQWHHAEGLLLPSLIIDWVLRQLQTSGFDFSHFCSFQEKQ 356

Query: 142 LLEACQLLLPIIYGFLEIVVLSQTYVRTLAGIALRVIRDPAPGGS 276
           LLE  QLLLPI+YGFLEIVVLSQTYVRTLAG+ALR+IRDPAPGGS
Sbjct: 357 LLEIWQLLLPIVYGFLEIVVLSQTYVRTLAGVALRIIRDPAPGGS 401


>ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid
           dehydrogenase, lipoyl-binding site [Medicago truncatula]
           gi|355498978|gb|AES80181.1| Mediator of RNA polymerase
           II transcription subunit [Medicago truncatula]
          Length = 2270

 Score =  159 bits (402), Expect = 2e-37
 Identities = 78/104 (75%), Positives = 86/104 (82%), Gaps = 13/104 (12%)
 Frame = +1

Query: 4   VSDGQESSLHFRWWYIVRLLQWHHAEGLILPSLVIDWVLNQL-------------QEKEL 144
           VS+G+E SLHFRWWY+VRLLQWHHAEGL+LPSLVIDWVL QL             QEK+L
Sbjct: 299 VSNGEEPSLHFRWWYVVRLLQWHHAEGLLLPSLVIDWVLRQLQTSGFDFSLFRFFQEKQL 358

Query: 145 LEACQLLLPIIYGFLEIVVLSQTYVRTLAGIALRVIRDPAPGGS 276
           LE  QLLLPI+YGFLEIVVLSQTYVRT AG+ALR+IRDPAPGGS
Sbjct: 359 LEIWQLLLPIVYGFLEIVVLSQTYVRTFAGVALRIIRDPAPGGS 402


>ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781696 [Glycine max]
          Length = 2240

 Score =  155 bits (391), Expect = 4e-36
 Identities = 79/105 (75%), Positives = 84/105 (80%), Gaps = 13/105 (12%)
 Frame = +1

Query: 1   SVSDGQESSLHFRWWYIVRLLQWHHAEGLILPSLVIDWVLNQLQ-------------EKE 141
           SVSDG+  SLHFRWWYIVRLLQWHHAEGL+  SLVIDWV NQLQ             EKE
Sbjct: 298 SVSDGEGPSLHFRWWYIVRLLQWHHAEGLLHSSLVIDWVFNQLQVFTFYINLFCNFQEKE 357

Query: 142 LLEACQLLLPIIYGFLEIVVLSQTYVRTLAGIALRVIRDPAPGGS 276
           LLE  QLLLPIIYGFLE +VLSQ+YVRTLAG+ALRVIRDPAPGGS
Sbjct: 358 LLEVWQLLLPIIYGFLETIVLSQSYVRTLAGLALRVIRDPAPGGS 402


>ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782672 [Glycine max]
          Length = 2235

 Score =  154 bits (388), Expect = 9e-36
 Identities = 78/105 (74%), Positives = 84/105 (80%), Gaps = 13/105 (12%)
 Frame = +1

Query: 1   SVSDGQESSLHFRWWYIVRLLQWHHAEGLILPSLVIDWVLNQLQ-------------EKE 141
           SVSDG+  SLHFRWWYIVRLLQW+HAEGL+ PSLVIDWV NQLQ             EK+
Sbjct: 298 SVSDGEGPSLHFRWWYIVRLLQWNHAEGLLHPSLVIDWVFNQLQASCFDFSHFCNFQEKD 357

Query: 142 LLEACQLLLPIIYGFLEIVVLSQTYVRTLAGIALRVIRDPAPGGS 276
           LLE  QLLLPIIYGFLE +VLSQTYVRTLAG+AL VIRDPAPGGS
Sbjct: 358 LLEVWQLLLPIIYGFLETIVLSQTYVRTLAGLALHVIRDPAPGGS 402


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