BLASTX nr result

ID: Glycyrrhiza24_contig00023224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023224
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48190.1| unknown [Lotus japonicus]                              356   4e-96
ref|XP_003595343.1| Polygalacturonase [Medicago truncatula] gi|3...   350   2e-94
ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [...   350   3e-94
ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [...   349   4e-94
ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like i...   336   4e-90

>gb|AFK48190.1| unknown [Lotus japonicus]
          Length = 482

 Score =  356 bits (913), Expect = 4e-96
 Identities = 172/198 (86%), Positives = 188/198 (94%)
 Frame = -3

Query: 833 YGIAYGKPSKNIVIRNLVVRSNVSAGISIGSEMSGGVSNVTVENILVWESRRAIRIKTAP 654
           YGIAYGKPSKNI+IRNLVVRSNVSAGISIGSEMSGGVSNVTVEN+LVWESRRAIRIKTAP
Sbjct: 285 YGIAYGKPSKNIIIRNLVVRSNVSAGISIGSEMSGGVSNVTVENVLVWESRRAIRIKTAP 344

Query: 653 GRGGYVRQITYRNLTFESVRVGIVVKTDYNEHPDAGYDPMALPILTDISFTTVRGWGVRV 474
           GRGGY+RQITYRNLTF +VRVGIV+KT+YNEHPDAGYDP+A P+L+DISF  VRG GVRV
Sbjct: 345 GRGGYMRQITYRNLTFNNVRVGIVIKTNYNEHPDAGYDPLAFPVLSDISFINVRGQGVRV 404

Query: 473 PVRIQGSEQIPVRNVTFRDMKVGITDKKKHIFQCAFVRGQVIGTIFPAPCGSFDQYNEQG 294
           PVRI+GS++I VRNVTF+DM VGIT KKKHIFQCAFV G+VIGTIFPAPCG+FDQYNEQG
Sbjct: 405 PVRIEGSKEISVRNVTFQDMNVGITYKKKHIFQCAFVEGRVIGTIFPAPCGNFDQYNEQG 464

Query: 293 ELVKHAESENVTDIDYEI 240
           ELVKHA S+NVTDIDYEI
Sbjct: 465 ELVKHAVSQNVTDIDYEI 482


>ref|XP_003595343.1| Polygalacturonase [Medicago truncatula] gi|355484391|gb|AES65594.1|
           Polygalacturonase [Medicago truncatula]
           gi|388518965|gb|AFK47544.1| unknown [Medicago
           truncatula]
          Length = 474

 Score =  350 bits (898), Expect = 2e-94
 Identities = 172/198 (86%), Positives = 182/198 (91%)
 Frame = -3

Query: 833 YGIAYGKPSKNIVIRNLVVRSNVSAGISIGSEMSGGVSNVTVENILVWESRRAIRIKTAP 654
           YGIAY KPSKNI+IRNLVVRSNVSAGISIGSEMSGGVSNVT+ENILVWESRRAIRIKTAP
Sbjct: 277 YGIAYAKPSKNIIIRNLVVRSNVSAGISIGSEMSGGVSNVTIENILVWESRRAIRIKTAP 336

Query: 653 GRGGYVRQITYRNLTFESVRVGIVVKTDYNEHPDAGYDPMALPILTDISFTTVRGWGVRV 474
           GRGGYVRQITYRN+TF +VRVGIV+KTDYNEHPD GYDP ALPIL DISFT +RG GVRV
Sbjct: 337 GRGGYVRQITYRNITFHNVRVGIVIKTDYNEHPDDGYDPTALPILRDISFTNIRGEGVRV 396

Query: 473 PVRIQGSEQIPVRNVTFRDMKVGITDKKKHIFQCAFVRGQVIGTIFPAPCGSFDQYNEQG 294
           PVRI GSE+IPVRNVTF DM VGIT KKKHIFQCAFV G+VIGTIFP PC +FDQYNEQG
Sbjct: 397 PVRITGSEEIPVRNVTFHDMNVGITYKKKHIFQCAFVEGRVIGTIFPKPCRNFDQYNEQG 456

Query: 293 ELVKHAESENVTDIDYEI 240
           ELVK A S+NVTDIDYEI
Sbjct: 457 ELVKQAVSQNVTDIDYEI 474


>ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 494

 Score =  350 bits (897), Expect = 3e-94
 Identities = 170/198 (85%), Positives = 184/198 (92%)
 Frame = -3

Query: 833 YGIAYGKPSKNIVIRNLVVRSNVSAGISIGSEMSGGVSNVTVENILVWESRRAIRIKTAP 654
           YGI YG+PSKNIVIRNLVVRSNVSAGISIGSEMSGGVSNV VENILVWESRRA+RIKTAP
Sbjct: 297 YGITYGRPSKNIVIRNLVVRSNVSAGISIGSEMSGGVSNVLVENILVWESRRAMRIKTAP 356

Query: 653 GRGGYVRQITYRNLTFESVRVGIVVKTDYNEHPDAGYDPMALPILTDISFTTVRGWGVRV 474
           GRGGYVRQITY+NL F++VRVGIV+KTDYNEHP  GYDP ALPIL DISF  +RG GVRV
Sbjct: 357 GRGGYVRQITYKNLMFKNVRVGIVIKTDYNEHPGTGYDPRALPILRDISFINIRGQGVRV 416

Query: 473 PVRIQGSEQIPVRNVTFRDMKVGITDKKKHIFQCAFVRGQVIGTIFPAPCGSFDQYNEQG 294
           PVRIQGSEQIPVRNVTF+DMK+GIT KKKHIFQCAFV+GQ IGTIFP+PC SFD+YNEQG
Sbjct: 417 PVRIQGSEQIPVRNVTFQDMKIGITYKKKHIFQCAFVQGQAIGTIFPSPCDSFDRYNEQG 476

Query: 293 ELVKHAESENVTDIDYEI 240
           +LVKHA S+NVTDIDYEI
Sbjct: 477 QLVKHAASQNVTDIDYEI 494


>ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 489

 Score =  349 bits (896), Expect = 4e-94
 Identities = 171/198 (86%), Positives = 184/198 (92%)
 Frame = -3

Query: 833 YGIAYGKPSKNIVIRNLVVRSNVSAGISIGSEMSGGVSNVTVENILVWESRRAIRIKTAP 654
           YGI YG+PSKNIVIRNLVVRSNVSAGISIGSEMSGGVSNV VENILVWESRRA+RIKTAP
Sbjct: 292 YGITYGRPSKNIVIRNLVVRSNVSAGISIGSEMSGGVSNVLVENILVWESRRAMRIKTAP 351

Query: 653 GRGGYVRQITYRNLTFESVRVGIVVKTDYNEHPDAGYDPMALPILTDISFTTVRGWGVRV 474
           GRGGYVRQITY+NL  ++VRVGIV+KTDYNEHP AGYDP ALPIL DISF  +RG GVRV
Sbjct: 352 GRGGYVRQITYKNLMLKNVRVGIVIKTDYNEHPGAGYDPRALPILRDISFMNIRGQGVRV 411

Query: 473 PVRIQGSEQIPVRNVTFRDMKVGITDKKKHIFQCAFVRGQVIGTIFPAPCGSFDQYNEQG 294
           PVRIQGSEQIPVRNVTF+DMKVGIT KKKHIFQCAFV+GQ IGTIFP+PC SFD+YNEQG
Sbjct: 412 PVRIQGSEQIPVRNVTFQDMKVGITYKKKHIFQCAFVQGQAIGTIFPSPCDSFDRYNEQG 471

Query: 293 ELVKHAESENVTDIDYEI 240
           +LVKHA S+NVTDIDYEI
Sbjct: 472 QLVKHAASQNVTDIDYEI 489


>ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
          Length = 492

 Score =  336 bits (861), Expect = 4e-90
 Identities = 160/197 (81%), Positives = 182/197 (92%)
 Frame = -3

Query: 833 YGIAYGKPSKNIVIRNLVVRSNVSAGISIGSEMSGGVSNVTVENILVWESRRAIRIKTAP 654
           YGI YG+PS NI+IRNLVVRS VSAGISIGSEMSGGVSNVTVEN+L+W+SRR +RIKTAP
Sbjct: 295 YGIDYGRPSMNIMIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAP 354

Query: 653 GRGGYVRQITYRNLTFESVRVGIVVKTDYNEHPDAGYDPMALPILTDISFTTVRGWGVRV 474
           GRG YVRQITYRN+TFE+VRVGIV+KTDYNEHPD GYDP+ALPIL DISFTTV G GVRV
Sbjct: 355 GRGAYVRQITYRNITFENVRVGIVMKTDYNEHPDDGYDPLALPILRDISFTTVHGQGVRV 414

Query: 473 PVRIQGSEQIPVRNVTFRDMKVGITDKKKHIFQCAFVRGQVIGTIFPAPCGSFDQYNEQG 294
           PVRI GSE+IPVRNVTF+DM VG+T KKKHIFQCAFV+G+VIGTI+PAPC + D+YNEQG
Sbjct: 415 PVRIHGSEEIPVRNVTFKDMSVGLTYKKKHIFQCAFVQGRVIGTIYPAPCENLDRYNEQG 474

Query: 293 ELVKHAESENVTDIDYE 243
           +LVKH+ S+NVTDIDY+
Sbjct: 475 QLVKHSASQNVTDIDYD 491


Top