BLASTX nr result

ID: Glycyrrhiza24_contig00023204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023204
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593650.1| hypothetical protein MTR_2g014570 [Medicago ...    81   8e-14
gb|ABN08716.1| SAM (and some other nucleotide) binding motif [Me...    81   8e-14
ref|XP_003543023.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...    72   4e-11
gb|ACU19970.1| unknown [Glycine max]                                   67   1e-09
ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|2235393...    59   5e-07

>ref|XP_003593650.1| hypothetical protein MTR_2g014570 [Medicago truncatula]
           gi|355482698|gb|AES63901.1| hypothetical protein
           MTR_2g014570 [Medicago truncatula]
          Length = 66

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = -1

Query: 317 RRQCSDGNYVLSGTTTSVMARPCGEARGHTGYLTFARLKCLS 192
           RRQCSDGNYVLS  T+SVMARPC EARGHTGYLTFARLKC S
Sbjct: 25  RRQCSDGNYVLSNPTSSVMARPCDEARGHTGYLTFARLKCFS 66


>gb|ABN08716.1| SAM (and some other nucleotide) binding motif [Medicago truncatula]
          Length = 307

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = -1

Query: 317 RRQCSDGNYVLSGTTTSVMARPCGEARGHTGYLTFARLKCLS 192
           RRQCSDGNYVLS  T+SVMARPC EARGHTGYLTFARLKC S
Sbjct: 266 RRQCSDGNYVLSNPTSSVMARPCDEARGHTGYLTFARLKCFS 307


>ref|XP_003543023.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase catalytic subunit
           TRMT61A-like [Glycine max]
          Length = 309

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/45 (77%), Positives = 40/45 (88%), Gaps = 3/45 (6%)
 Frame = -1

Query: 317 RRQCSDGNYVLSGTT---TSVMARPCGEARGHTGYLTFARLKCLS 192
           RRQCSDG+YVLS ++   +SVMARPCGEARGHTGYLTFAR+K LS
Sbjct: 265 RRQCSDGSYVLSSSSPSISSVMARPCGEARGHTGYLTFARVKSLS 309


>gb|ACU19970.1| unknown [Glycine max]
          Length = 60

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 3/45 (6%)
 Frame = -1

Query: 317 RRQCSDGNYVLSGTT---TSVMARPCGEARGHTGYLTFARLKCLS 192
           RRQCSDG+YVLS ++   +SVMA PCGEA GHTGYLTFAR+K LS
Sbjct: 16  RRQCSDGSYVLSSSSPSISSVMASPCGEAGGHTGYLTFARVKSLS 60


>ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|223539341|gb|EEF40932.1| tRNA,
           putative [Ricinus communis]
          Length = 311

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/43 (62%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
 Frame = -1

Query: 317 RRQCSDGNYVLSGTTTSV-MARPCGEARGHTGYLTFARLKCLS 192
           R++ S+G+ V + +++ V MARPCG++RGHTGYLTFARLKCLS
Sbjct: 269 RQRSSEGSNVQNSSSSPVIMARPCGDSRGHTGYLTFARLKCLS 311


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