BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023200
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containi...   563   e-158
ref|XP_003618546.1| Pentatricopeptide repeat-containing protein ...   556   e-156
ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|2...   466   e-129
ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containi...   457   e-126
ref|NP_197038.1| pentatricopeptide repeat-containing protein [Ar...   414   e-113

>ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
            mitochondrial-like [Glycine max]
          Length = 629

 Score =  563 bits (1452), Expect = e-158
 Identities = 278/341 (81%), Positives = 299/341 (87%), Gaps = 5/341 (1%)
 Frame = +1

Query: 1    VDMYAKCGRISAALLVFRHMLRRNVVAWNXXXXXXXXXXXXKLVVDMFSCMVEEEKVKPD 180
            VDMYAKCGRISAAL+VFRHM RRNVVAWN            K+VV+MF+CMVEE  VKPD
Sbjct: 291  VDMYAKCGRISAALMVFRHMPRRNVVAWNAMLCGLAMHGMGKVVVEMFACMVEE--VKPD 348

Query: 181  GVTFMALLSACSHSGLVEKGWQYFHDLESVYGIKPEIEHYACMVDLLGRSGRLEEAVILV 360
             VTFMALLS+CSHSGLVE+GWQYFHDLE  YGI+PEIEHYACMVDLLGR+GRLEEA  LV
Sbjct: 349  AVTFMALLSSCSHSGLVEQGWQYFHDLERAYGIRPEIEHYACMVDLLGRAGRLEEAEDLV 408

Query: 361  KDMPIPPNEVVLGSLLGSCYAHGKLQLGEQIMRELVEMDPLNTEYHILLSNMYALYGKLD 540
            K +PIPPNEVVLGSLLG+CYAHGKL+LGE+IMRELV+MDPLNTEYHILLSNMYAL GK D
Sbjct: 409  KKLPIPPNEVVLGSLLGACYAHGKLRLGEKIMRELVQMDPLNTEYHILLSNMYALCGKAD 468

Query: 541  KANSLRNVLKKRGIRKVPGMSSIYVGGQLHQFSAGDKSHPQASEIYMKLDDMICKLRFGG 720
            KANSLR VLK RGIRKVPGMSSIYV GQLH+F AGDKSHP+ ++IYMKLDDMICKLR  G
Sbjct: 469  KANSLRKVLKNRGIRKVPGMSSIYVDGQLHRFIAGDKSHPRTADIYMKLDDMICKLRLAG 528

Query: 721  YVPNTSCQVLFG-----GCDEALEEVEQVLFTHSEKLALCFGLMSTVSGSPLYIFKNLRI 885
            YVPNT+CQVLFG      C EA EEVEQVLFTHSEKLALCFGLMST S SPL IFKNLRI
Sbjct: 529  YVPNTNCQVLFGCSNGDDCMEAFEEVEQVLFTHSEKLALCFGLMSTPSSSPLCIFKNLRI 588

Query: 886  CQDCHSAIKVASDVYQREIVVRDRYRFHSFKHGSCSCSDYW 1008
            CQDCHSAIK+ASD+Y+REIVVRDRYRFHSFK GSCSCSDYW
Sbjct: 589  CQDCHSAIKIASDIYKREIVVRDRYRFHSFKQGSCSCSDYW 629


>ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355493561|gb|AES74764.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 637

 Score =  556 bits (1434), Expect = e-156
 Identities = 276/341 (80%), Positives = 299/341 (87%), Gaps = 5/341 (1%)
 Frame = +1

Query: 1    VDMYAKCGRISAALLVFRHMLRRNVVAWNXXXXXXXXXXXXKLVVDMFSCMVEEEKVKPD 180
            VDMYAKCGRI+AAL VFR ML+RNVVAWN            K+ VDMF  MVEE  VKPD
Sbjct: 299  VDMYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHGMGKIAVDMFPSMVEE--VKPD 356

Query: 181  GVTFMALLSACSHSGLVEKGWQYFHDLESVYGIKPEIEHYACMVDLLGRSGRLEEAVILV 360
            GVTFMALLSACSHSGLVEKGW YFHDLE VY IKPEIEHYACMV LLGR+GRLEEA I+V
Sbjct: 357  GVTFMALLSACSHSGLVEKGWDYFHDLEPVYRIKPEIEHYACMVGLLGRAGRLEEAEIMV 416

Query: 361  KDMPIPPNEVVLGSLLGSCYAHGKLQLGEQIMRELVEMDPLNTEYHILLSNMYALYGKLD 540
            K+M IPPNEVVLGSL+GSCYAHG+LQLGE+IMR+L+EMDPLNTEYHI+LSNMYAL GK++
Sbjct: 417  KNMRIPPNEVVLGSLIGSCYAHGRLQLGEKIMRDLLEMDPLNTEYHIVLSNMYALSGKVE 476

Query: 541  KANSLRNVLKKRGIRKVPGMSSIYVGGQLHQFSAGDKSHPQASEIYMKLDDMICKLRFGG 720
            KANSLR VLKKRGI+KVPGMSSIYV G+LHQF AGDKSH + SEIYMKLD+MIC+LR  G
Sbjct: 477  KANSLRQVLKKRGIKKVPGMSSIYVDGKLHQFIAGDKSHTRTSEIYMKLDEMICRLRSAG 536

Query: 721  YVPNTSCQVLFG-----GCDEALEEVEQVLFTHSEKLALCFGLMSTVSGSPLYIFKNLRI 885
            YVPNTSCQVLFG      C E+LEEVEQVLFTHSEKLALCFGLMST SGSPL+IFKNLRI
Sbjct: 537  YVPNTSCQVLFGCSNRDDCSESLEEVEQVLFTHSEKLALCFGLMSTPSGSPLHIFKNLRI 596

Query: 886  CQDCHSAIKVASDVYQREIVVRDRYRFHSFKHGSCSCSDYW 1008
            CQDCHSAIK+AS VY+REIVVRDRYRFHSFKHGSCSCSDYW
Sbjct: 597  CQDCHSAIKIASKVYKREIVVRDRYRFHSFKHGSCSCSDYW 637


>ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|222867076|gb|EEF04207.1|
            predicted protein [Populus trichocarpa]
          Length = 636

 Score =  466 bits (1198), Expect = e-129
 Identities = 229/341 (67%), Positives = 268/341 (78%), Gaps = 5/341 (1%)
 Frame = +1

Query: 1    VDMYAKCGRISAALLVFRHMLRRNVVAWNXXXXXXXXXXXXKLVVDMFSCMVEEEKVKPD 180
            VDMYAKCG I  A  VF+++ +RNVVAWN            K V+D+F  M+EE   KPD
Sbjct: 298  VDMYAKCGPIDMAFKVFKYLPKRNVVAWNAMLGGLAMHGRGKFVLDIFPKMIEE--AKPD 355

Query: 181  GVTFMALLSACSHSGLVEKGWQYFHDLESVYGIKPEIEHYACMVDLLGRSGRLEEAVILV 360
             +TFMA+LSACSHSGLV++G+ YF  LES YG  P+IEHYACMVD+LGR+G LEEAV+L+
Sbjct: 356  DLTFMAVLSACSHSGLVDQGYHYFRSLESEYGTTPKIEHYACMVDILGRAGHLEEAVMLI 415

Query: 361  KDMPIPPNEVVLGSLLGSCYAHGKLQLGEQIMRELVEMDPLNTEYHILLSNMYALYGKLD 540
            K MP+ PNEVVLGSLLGSC AHGKLQLGE+I++EL++MD  NTEYH+LLSNMY L GK D
Sbjct: 416  KKMPMCPNEVVLGSLLGSCNAHGKLQLGERILQELIQMDGHNTEYHVLLSNMYVLEGKQD 475

Query: 541  KANSLRNVLKKRGIRKVPGMSSIYVGGQLHQFSAGDKSHPQASEIYMKLDDMICKLRFGG 720
            KANSLR +LK +GIRKVPG+SSIYVGG +HQFSAGDKSHP   EIY  L++MI +LR  G
Sbjct: 476  KANSLRQILKSKGIRKVPGVSSIYVGGNIHQFSAGDKSHPLTKEIYHALNNMIQRLRLAG 535

Query: 721  YVPNTSCQVLFG-----GCDEALEEVEQVLFTHSEKLALCFGLMSTVSGSPLYIFKNLRI 885
            YVPNT+ QV  G     G  E +EE EQ LF HSEKLA+CFG +ST  G+PLYIFKNLRI
Sbjct: 536  YVPNTTNQVFPGSDGREGSSEEMEEKEQALFLHSEKLAVCFGHISTKPGAPLYIFKNLRI 595

Query: 886  CQDCHSAIKVASDVYQREIVVRDRYRFHSFKHGSCSCSDYW 1008
            CQDCHSAIK+ S +Y REIV+RDR RFH FKHGSCSCSDYW
Sbjct: 596  CQDCHSAIKIVSKIYNREIVIRDRNRFHCFKHGSCSCSDYW 636


>ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
            mitochondrial-like [Vitis vinifera]
          Length = 632

 Score =  457 bits (1177), Expect = e-126
 Identities = 228/342 (66%), Positives = 267/342 (78%), Gaps = 6/342 (1%)
 Frame = +1

Query: 1    VDMYAKCGRISAALLVFRHMLRRNVVAWNXXXXXXXXXXXXKLVVDMFSCMVEEEKVKPD 180
            VDMYAKCGRI  A   F+ M +RNVV+WN            +  +D+F  M +E   KPD
Sbjct: 294  VDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKE--AKPD 351

Query: 181  GVTFMALLSACSHSGLVEKGWQYFHDLESVYGIKPEIEHYACMVDLLGRSGRLEEAVILV 360
             VTF ++LSACSHSGLV++G  YF +LESVYGI P++EHYACMVDLLGR+GRLEEA ILV
Sbjct: 352  DVTFTSVLSACSHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILV 411

Query: 361  KDMPIPPNEVVLGSLLGSCYAHGKLQLGEQIMRELVEMDPLNTEYHILLSNMYALYGKLD 540
            ++MPI PNEVVLGSLLGSC  HGKLQLGE +++ELV++DP NTEYHILLSNMYAL GK +
Sbjct: 412  REMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQN 471

Query: 541  KANSLRNVLKKRGIRKVPGMSSIYVGGQLHQFSAGDKSHPQASEIYMKLDDMICKLRFGG 720
            +ANSLR VLKKRGI+KVPGMSSI+VGGQ+HQFSAGDKSHP+  E+Y  LD+MI +LR  G
Sbjct: 472  RANSLRQVLKKRGIKKVPGMSSIHVGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAG 531

Query: 721  YVPNTSCQVLFGGCDE------ALEEVEQVLFTHSEKLALCFGLMSTVSGSPLYIFKNLR 882
            Y PNT+ Q  F GCD         EE EQ LF+HSEKLA+CFGL+ST  G PL+IFKNLR
Sbjct: 532  YAPNTALQT-FAGCDSLEDDLVEQEEKEQALFSHSEKLAICFGLISTGPGVPLHIFKNLR 590

Query: 883  ICQDCHSAIKVASDVYQREIVVRDRYRFHSFKHGSCSCSDYW 1008
            ICQDCHSAIK+ S +Y REIV+RDR RFH FK GSCSC DYW
Sbjct: 591  ICQDCHSAIKIVSKIYNREIVIRDRNRFHCFKEGSCSCCDYW 632


>ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g15340, mitochondrial; Flags: Precursor
            gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis
            thaliana] gi|332004768|gb|AED92151.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  414 bits (1064), Expect = e-113
 Identities = 198/336 (58%), Positives = 256/336 (76%)
 Frame = +1

Query: 1    VDMYAKCGRISAALLVFRHMLRRNVVAWNXXXXXXXXXXXXKLVVDMFSCMVEEEKVKPD 180
            VDMYAKCG I +++ VFR M +RNVV WN            ++V+DMF  M+ E  VKPD
Sbjct: 293  VDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE--VKPD 350

Query: 181  GVTFMALLSACSHSGLVEKGWQYFHDLESVYGIKPEIEHYACMVDLLGRSGRLEEAVILV 360
             +TF A+LSACSHSG+V++GW+ FH L   YG++P+++HYACMVDLLGR+G +EEA IL+
Sbjct: 351  DLTFTAVLSACSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILM 409

Query: 361  KDMPIPPNEVVLGSLLGSCYAHGKLQLGEQIMRELVEMDPLNTEYHILLSNMYALYGKLD 540
            ++MP+PPNEVVLGSLLGSC  HGK+++ E+I REL++M P NTEY IL+SNMY   G+ D
Sbjct: 410  REMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSD 469

Query: 541  KANSLRNVLKKRGIRKVPGMSSIYVGGQLHQFSAGDKSHPQASEIYMKLDDMICKLRFGG 720
             A+ LR  L+KRGIRK+PG+SSIYV   +H+FS+GD+SHP+  EIY+KL+++I ++R  G
Sbjct: 470  IADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAG 529

Query: 721  YVPNTSCQVLFGGCDEALEEVEQVLFTHSEKLALCFGLMSTVSGSPLYIFKNLRICQDCH 900
            YVP+ S  V     D  LEE EQ L  HSEKLA+CFGL+ T   +PL +FKNLRIC+DCH
Sbjct: 530  YVPDVSGLVSHSEGD--LEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCH 587

Query: 901  SAIKVASDVYQREIVVRDRYRFHSFKHGSCSCSDYW 1008
            SA+K+ S VY REI++RDR RFH FK GSCSCSDYW
Sbjct: 588  SAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623