BLASTX nr result

ID: Glycyrrhiza24_contig00023196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023196
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532753.1| PREDICTED: protein SCAR3-like [Glycine max]       159   3e-37
ref|XP_003629765.1| SCAR-like protein [Medicago truncatula] gi|3...   157   7e-37
ref|XP_003524203.1| PREDICTED: protein SCAR3-like [Glycine max]        91   7e-17
ref|XP_002305068.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera]     57   2e-06

>ref|XP_003532753.1| PREDICTED: protein SCAR3-like [Glycine max]
          Length = 1115

 Score =  159 bits (401), Expect = 3e-37
 Identities = 78/106 (73%), Positives = 89/106 (83%)
 Frame = -1

Query: 318 SSSRLTQKTDTLQSVSPLIDDNISHDSLEKHIASCSSGVTWDEKEEIVESTSQTCDTDKT 139
           SS++L +K DTL SVS  IDD+ISHD+LEK +AS SSGVTWDEKEEIVES SQ CD DKT
Sbjct: 280 SSTKLKRKNDTLSSVSHHIDDSISHDTLEKQVASSSSGVTWDEKEEIVESKSQACDIDKT 339

Query: 138 PERLVEKHDSDIHANDAVTITNIDYNDILFNEERNRKPVFSKVQTD 1
           PERLVE HD D+H N+AVTIT+IDYN ILFNEE N KPV ++VQTD
Sbjct: 340 PERLVENHDLDMHVNEAVTITSIDYNHILFNEESNLKPVSNRVQTD 385


>ref|XP_003629765.1| SCAR-like protein [Medicago truncatula] gi|355523787|gb|AET04241.1|
           SCAR-like protein [Medicago truncatula]
          Length = 1210

 Score =  157 bits (398), Expect = 7e-37
 Identities = 82/114 (71%), Positives = 92/114 (80%), Gaps = 6/114 (5%)
 Frame = -1

Query: 324 ELSSSRLTQKTDTLQSVSPL------IDDNISHDSLEKHIASCSSGVTWDEKEEIVESTS 163
           E SSSRLT KTD L+SVSP       IDDNIS+DSLEK IAS SSGVTWDEKEEI+ES S
Sbjct: 278 EPSSSRLTPKTDNLKSVSPPKSVSPPIDDNISNDSLEKQIASSSSGVTWDEKEEILESNS 337

Query: 162 QTCDTDKTPERLVEKHDSDIHANDAVTITNIDYNDILFNEERNRKPVFSKVQTD 1
           Q C+ DKTPERLVEK DSD+H ++AV I+NIDYNDILFNEER  KPVF ++Q D
Sbjct: 338 QACEADKTPERLVEKCDSDMHVSEAVNISNIDYNDILFNEERILKPVFGEIQAD 391


>ref|XP_003524203.1| PREDICTED: protein SCAR3-like [Glycine max]
          Length = 1236

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 56/108 (51%), Positives = 63/108 (58%)
 Frame = -1

Query: 324 ELSSSRLTQKTDTLQSVSPLIDDNISHDSLEKHIASCSSGVTWDEKEEIVESTSQTCDTD 145
           E SS+RL QK DTL SVS  IDD+ISHDSLEK +AS S GVTWDEKEEI           
Sbjct: 206 EPSSTRLKQKADTLSSVSHHIDDSISHDSLEKQVASSSFGVTWDEKEEI----------- 254

Query: 144 KTPERLVEKHDSDIHANDAVTITNIDYNDILFNEERNRKPVFSKVQTD 1
               RL  +HD +            DYN ILF EE N KPV ++ QTD
Sbjct: 255 ----RLHNQHDYN------------DYNHILFTEENNLKPVRNRAQTD 286


>ref|XP_002305068.1| predicted protein [Populus trichocarpa] gi|222848032|gb|EEE85579.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 43/111 (38%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
 Frame = -1

Query: 315 SSRLTQKTDTLQSVSP-----LIDDNISHDSLEKHIAS-CSSGVTWDEKEEIVESTSQTC 154
           SSR  Q+ D   SV P     + D+N  H S  + IA+  SS VTWDEKEEIVE + Q  
Sbjct: 257 SSRFMQQNDVPDSVFPDRQPGMADNNFHHTSSPEQIAAPISSCVTWDEKEEIVEPSGQHY 316

Query: 153 DTDKTPERLVEKHDSDIHANDAVTITNIDYNDILFNEERNRKPVFSKVQTD 1
           D D+  E L  + D D H    V + N +  DI+ +     K   S+ Q D
Sbjct: 317 DEDEISEVLAAEPDLDTHDRSTVNLKNPNPLDIVLDGANTPKSSSSRSQLD 367


>ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera]
          Length = 1135

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
 Frame = -1

Query: 318 SSSRLTQKTDTLQSVSP-----LIDDNISHDSLEKHIASCSSGVTWDEKEEIVESTSQTC 154
           SS    Q  DT  S SP     L+++   H+S +K     SS VTWDEK EIVE   Q  
Sbjct: 280 SSGLKMQSHDTFDSASPDGQTKLLENGFPHNSPQKQTGCSSSCVTWDEKTEIVEPKGQES 339

Query: 153 DTDKTPERLVEKHDSDIHANDAVTITNIDYNDILFNEE 40
           D D+  E L    + +      V+I N+D  DIL  ++
Sbjct: 340 DGDEASEMLPTICNLETQERAPVSIRNVDEMDILLVDD 377


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