BLASTX nr result

ID: Glycyrrhiza24_contig00023145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023145
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...   214   8e-54
ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm...   213   3e-53
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...   206   4e-51
gb|ABK92768.1| unknown [Populus trichocarpa]                          206   4e-51
ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc...   180   2e-43

>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
           gi|296088512|emb|CBI37503.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  214 bits (546), Expect = 8e-54
 Identities = 98/201 (48%), Positives = 137/201 (68%)
 Frame = +2

Query: 44  DIPSKLKFKLVRVKQVENXXXXXXXXXXXXXYSSETGAWRKSNEICQCDSNLIKNKGVYI 223
           D+P+   FK+VRV Q +              YSS+ GAW+KS EICQC+ NL KNKG+++
Sbjct: 151 DMPTN--FKVVRVSQAQTDMDDDSYFSFEI-YSSQAGAWKKSKEICQCNHNLFKNKGIFV 207

Query: 224 GGVLHWLTDGDQVLTFDVEKELSWLISVPVPALEFRTVPEACIGEYEGKLHYVQVSEEGL 403
           GG+LHWLTDGDQVL+F++E ELSWLIS P P +    +PE CIGE  G+LHY+ +SE+GL
Sbjct: 208 GGILHWLTDGDQVLSFNIENELSWLISAPFPTIHLTAIPEMCIGESRGRLHYIMISEDGL 267

Query: 404 HVWYLEDYYEFKWTLKLWKSLVDIEVEYPHLFLNLKNRVSERVSMDTTPWMNPLGFQDGV 583
            VW LEDYY+  W+L    +L  +E E   L  N ++RV++R+S+D+ PWM+PL F+DG+
Sbjct: 268 QVWALEDYYDSNWSLVHSTTLEVMEEENSQLLYNTRDRVAQRISIDSIPWMDPLAFKDGL 327

Query: 584 LLIKVCVNLYTYDMKNNKMAQ 646
           LL++V   +  Y +   KM +
Sbjct: 328 LLMRVSTKIILYCIGTRKMEE 348


>ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis]
           gi|223535221|gb|EEF36899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 375

 Score =  213 bits (541), Expect = 3e-53
 Identities = 95/170 (55%), Positives = 127/170 (74%)
 Frame = +2

Query: 137 YSSETGAWRKSNEICQCDSNLIKNKGVYIGGVLHWLTDGDQVLTFDVEKELSWLISVPVP 316
           YSS TG+W  S +IC C+SNL KNKGVYI GVLHWLTD DQ+LTFDV+ EL++LIS PVP
Sbjct: 175 YSSRTGSWNLSKDICWCNSNLHKNKGVYIRGVLHWLTDEDQILTFDVDNELAFLISAPVP 234

Query: 317 ALEFRTVPEACIGEYEGKLHYVQVSEEGLHVWYLEDYYEFKWTLKLWKSLVDIEVEYPHL 496
           A EF T P+ACIGE EG LHYV +SEEG H+W LEDY+E  W LK  K+L ++E E+P  
Sbjct: 235 AAEFSTAPKACIGELEGCLHYVMISEEGFHIWSLEDYFELNWLLKYSKTLAEMEQEHPKF 294

Query: 497 FLNLKNRVSERVSMDTTPWMNPLGFQDGVLLIKVCVNLYTYDMKNNKMAQ 646
            LN++  V  +++ D +PW++ L F+DG+L+++V   +Y YD+  +KM +
Sbjct: 295 LLNMQELVKLQMTDDVSPWVDSLAFKDGILVLRVSTIVYLYDIIRSKMQE 344


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  206 bits (523), Expect = 4e-51
 Identities = 97/194 (50%), Positives = 133/194 (68%)
 Frame = +2

Query: 65  FKLVRVKQVENXXXXXXXXXXXXXYSSETGAWRKSNEICQCDSNLIKNKGVYIGGVLHWL 244
           FK+VR +Q E              Y+S T  W+ S E+C CD++L KN+G++ GG+LHWL
Sbjct: 159 FKVVRPRQFETEQEEAYFSFEI--YASRTRNWKLSKEVCWCDNSLSKNEGIFSGGILHWL 216

Query: 245 TDGDQVLTFDVEKELSWLISVPVPALEFRTVPEACIGEYEGKLHYVQVSEEGLHVWYLED 424
           TDGDQ+LTF+VE EL+ LIS P+PA EF T P ACIGE EG+L+YV +SEEGLHVW LED
Sbjct: 217 TDGDQILTFNVENELALLISTPLPAGEFNTRPHACIGESEGQLYYVLISEEGLHVWVLED 276

Query: 425 YYEFKWTLKLWKSLVDIEVEYPHLFLNLKNRVSERVSMDTTPWMNPLGFQDGVLLIKVCV 604
           Y++  W+LK  K+L  IE E+  + +NL NRV     +D  PWM+PL F+DGVL++++  
Sbjct: 277 YFDSTWSLKYSKTLAQIEKEHSDIMINLYNRVMLWQRIDDRPWMDPLAFKDGVLVVRISN 336

Query: 605 NLYTYDMKNNKMAQ 646
            +Y Y +  +KM +
Sbjct: 337 TIYLYHVDTSKMEE 350


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score =  206 bits (523), Expect = 4e-51
 Identities = 97/194 (50%), Positives = 133/194 (68%)
 Frame = +2

Query: 65  FKLVRVKQVENXXXXXXXXXXXXXYSSETGAWRKSNEICQCDSNLIKNKGVYIGGVLHWL 244
           FK+VR +Q E              Y+S T  W+ S E+C CD++L KN+G++ GG+LHWL
Sbjct: 159 FKVVRPRQFETEQEEAYFSFEI--YASRTRNWKLSKEVCWCDNSLSKNEGIFSGGILHWL 216

Query: 245 TDGDQVLTFDVEKELSWLISVPVPALEFRTVPEACIGEYEGKLHYVQVSEEGLHVWYLED 424
           TDGDQ+LTF+VE EL+ LIS P+PA EF T P ACIGE EG+L+YV +SEEGLHVW LED
Sbjct: 217 TDGDQILTFNVENELALLISTPLPAGEFNTRPHACIGESEGQLYYVLISEEGLHVWVLED 276

Query: 425 YYEFKWTLKLWKSLVDIEVEYPHLFLNLKNRVSERVSMDTTPWMNPLGFQDGVLLIKVCV 604
           Y++  W+LK  K+L  IE E+  + +NL NRV     +D  PWM+PL F+DGVL++++  
Sbjct: 277 YFDSTWSLKYSKTLAQIEKEHSDIMINLYNRVMLWQRIDDRPWMDPLAFKDGVLVVRISN 336

Query: 605 NLYTYDMKNNKMAQ 646
            +Y Y +  +KM +
Sbjct: 337 TIYLYHVDTSKMEE 350


>ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 399

 Score =  180 bits (456), Expect = 2e-43
 Identities = 90/195 (46%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
 Frame = +2

Query: 65  FKLVRVKQVENXXXXXXXXXXXXXYSSETGAWRKSNEICQCDSNLIKNKGVYIGGVLHWL 244
           FK+VR++Q+EN             YSSETG W++S+E+C  D NL+KN G Y  GVLHWL
Sbjct: 162 FKVVRIQQLENEQEEMYYTFEI--YSSETGTWKESSEVCYSDGNLLKNNGTYAKGVLHWL 219

Query: 245 TDGDQVLTFDVEKELSWLISVPVPALE-FRTVPEACIGEYEGKLHYVQVSEEGLHVWYLE 421
           TD DQ+L FD EKELS L+  P+PALE F   P  CIGE +G LH++ + E+G+ VW L+
Sbjct: 220 TDTDQILAFDTEKELSLLVPSPIPALEMFIDAPGTCIGESKGLLHFIMICEDGIIVWCLD 279

Query: 422 DYYEFKWTLKLWKSLVDIEVEYPHLFLNLKNRVSERVSMDTTPWMNPLGFQDGVLLIKVC 601
           DY+E KWTLK  K L  IE E P++F  L   +  +      P+M+P  F+D VLL++V 
Sbjct: 280 DYFEAKWTLKHSKQLQMIEDENPNMFFKLYKIMQRKRLPGMEPYMDPWAFKDEVLLMRVF 339

Query: 602 VNLYTYDMKNNKMAQ 646
             +Y Y  +  K+ +
Sbjct: 340 STVYFYHTETGKVVE 354


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