BLASTX nr result

ID: Glycyrrhiza24_contig00023135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023135
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546839.1| PREDICTED: nuclear-pore anchor-like [Glycine...   368   e-100
ref|XP_003532900.1| PREDICTED: nuclear-pore anchor-like [Glycine...   362   4e-98
ref|XP_003595922.1| Nuclear-pore anchor [Medicago truncatula] gi...   350   2e-94
ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|2...   300   2e-79
ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communi...   298   7e-79

>ref|XP_003546839.1| PREDICTED: nuclear-pore anchor-like [Glycine max]
          Length = 2075

 Score =  368 bits (945), Expect = e-100
 Identities = 189/229 (82%), Positives = 203/229 (88%)
 Frame = +2

Query: 2    ENNMLVPKIPVGVSGTALAASLLRDGWSLAKMYAKYQEAVDALRHEQLGRKESEAILQRV 181
            EN++LVP+IPVGVSGTALAASLLRDGWSLAKMYAKYQE VDALRHEQLGRKESEA+LQRV
Sbjct: 386  ENSLLVPRIPVGVSGTALAASLLRDGWSLAKMYAKYQEVVDALRHEQLGRKESEAVLQRV 445

Query: 182  LYELEEKAEAIKDERVEHETMADAYSLMNHKLQNSLSENSNLQKTIQELKADLKRHERDY 361
            LYELE+KAEAI DERVEH+ MADAYSLMN KLQNSL+ENSNL+KTIQELKADLKR ERDY
Sbjct: 446  LYELEQKAEAILDERVEHDKMADAYSLMNQKLQNSLNENSNLEKTIQELKADLKRRERDY 505

Query: 362  NLAQKEIDDLRKQVTVLLKECRDIQIRCGSIGNDIVDDALNIASRTSTNTEAENVISEHL 541
            NL  KE DDL+KQVTVLLKECRDIQ+RCGS+G DIVDDA NIASRTS  TEAE+VISEHL
Sbjct: 506  NLVLKETDDLQKQVTVLLKECRDIQLRCGSMGYDIVDDASNIASRTSRETEAEDVISEHL 565

Query: 542  LTFKDINGLVEQNXXXXXXXXXXXXXIENQEAEFKERLEMELKKHTEEA 688
            LTFKDINGLVEQN             IENQE EFKE+LEMELKKHTEE+
Sbjct: 566  LTFKDINGLVEQNVQLRSLVRSISGHIENQEVEFKEKLEMELKKHTEES 614


>ref|XP_003532900.1| PREDICTED: nuclear-pore anchor-like [Glycine max]
          Length = 2088

 Score =  362 bits (929), Expect = 4e-98
 Identities = 189/235 (80%), Positives = 202/235 (85%), Gaps = 9/235 (3%)
 Frame = +2

Query: 11   MLVPKIPVGVSGTALAASLLRDGWSLAKMYAKYQEAVDALRHEQLGRKESEAILQRVLYE 190
            +LVP+IPVGVSGTALAASLLRDGWSLAKMYAKYQEA+DALRHEQLGRKESEA+LQRVLYE
Sbjct: 390  LLVPRIPVGVSGTALAASLLRDGWSLAKMYAKYQEAIDALRHEQLGRKESEAVLQRVLYE 449

Query: 191  LEEKAEAIKDERVEHETMADAYSLMNHKLQNSLSENSNLQKTIQELKADLKRHERDYNLA 370
            LEEKAEAI DERVEHE MAD+YSLMN KL+ SL+ENSNL+KTIQELKADLKRHERDYNL 
Sbjct: 450  LEEKAEAIIDERVEHEKMADSYSLMNQKLRKSLNENSNLEKTIQELKADLKRHERDYNLV 509

Query: 371  QKEIDDLRKQ---------VTVLLKECRDIQIRCGSIGNDIVDDALNIASRTSTNTEAEN 523
            QKE DDLRKQ         VTVLLKECRDIQ+RCGS+G DIVDDA NI SRTST TEAE+
Sbjct: 510  QKETDDLRKQVNRNTIFYYVTVLLKECRDIQLRCGSMGYDIVDDASNIVSRTSTETEAEH 569

Query: 524  VISEHLLTFKDINGLVEQNXXXXXXXXXXXXXIENQEAEFKERLEMELKKHTEEA 688
            VISEHLLTFKDINGLVEQN             IENQE EFKE+LEMELKKHTEE+
Sbjct: 570  VISEHLLTFKDINGLVEQNVQLRSLVRSISGHIENQEVEFKEKLEMELKKHTEES 624


>ref|XP_003595922.1| Nuclear-pore anchor [Medicago truncatula] gi|355484970|gb|AES66173.1|
            Nuclear-pore anchor [Medicago truncatula]
          Length = 2288

 Score =  350 bits (897), Expect = 2e-94
 Identities = 181/229 (79%), Positives = 199/229 (86%)
 Frame = +2

Query: 2    ENNMLVPKIPVGVSGTALAASLLRDGWSLAKMYAKYQEAVDALRHEQLGRKESEAILQRV 181
            ENN LV KIPVGVSGTALAASLLRDGWSLAKMYAKYQEAVDALRHEQLGRKESE+ILQRV
Sbjct: 541  ENNALVSKIPVGVSGTALAASLLRDGWSLAKMYAKYQEAVDALRHEQLGRKESESILQRV 600

Query: 182  LYELEEKAEAIKDERVEHETMADAYSLMNHKLQNSLSENSNLQKTIQELKADLKRHERDY 361
            L ELE KAEAI+DERVEH+ MADAYSLMN KLQ+SL+ENSNL+K I ELKADLKRHER+Y
Sbjct: 601  LNELEGKAEAIEDERVEHDKMADAYSLMNQKLQHSLNENSNLEKAILELKADLKRHEREY 660

Query: 362  NLAQKEIDDLRKQVTVLLKECRDIQIRCGSIGNDIVDDALNIASRTSTNTEAENVISEHL 541
            NLAQKEIDDLRKQVTVLLKEC+DIQ+RCGS GN+I  +A NI+SRT+T T+AE++IS+HL
Sbjct: 661  NLAQKEIDDLRKQVTVLLKECQDIQVRCGSFGNNINANATNISSRTNTATDAESIISQHL 720

Query: 542  LTFKDINGLVEQNXXXXXXXXXXXXXIENQEAEFKERLEMELKKHTEEA 688
            LTFKDIN LVEQN              ENQ+ EFKE LEMELKKHTEEA
Sbjct: 721  LTFKDINELVEQNVQLRSLVRSLYEQFENQKVEFKENLEMELKKHTEEA 769


>ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|222852039|gb|EEE89586.1|
            predicted protein [Populus trichocarpa]
          Length = 2052

 Score =  300 bits (767), Expect = 2e-79
 Identities = 160/229 (69%), Positives = 185/229 (80%), Gaps = 1/229 (0%)
 Frame = +2

Query: 5    NNMLVPKIPVGVSGTALAASLLRDGWSLAKMYAKYQEAVDALRHEQLGRKESEAILQRVL 184
            N+M+V KIPVGVSGTALAASLLRDGWSLAKMYAKYQEAVDALRHEQLGRKESEA+LQRVL
Sbjct: 387  NSMVVSKIPVGVSGTALAASLLRDGWSLAKMYAKYQEAVDALRHEQLGRKESEAVLQRVL 446

Query: 185  YELEEKAEAIKDERVEHETMADAYSLMNHKLQNSLSENSNLQKTIQELKADLKRHERDYN 364
             ELEEKA  I DERVE+E M ++YS++N KLQ+S SE +NL+KTIQELKADL+RHER Y+
Sbjct: 447  CELEEKAGVILDERVEYERMVESYSVINQKLQHSFSEQANLEKTIQELKADLRRHERGYS 506

Query: 365  LAQKEIDDLRKQVTVLLKECRDIQIRCGSIGNDIVDDALNIAS-RTSTNTEAENVISEHL 541
             AQKEI DL+KQVTVLLKECRDIQ+RCGS G+D VD++  IA       ++ EN I E  
Sbjct: 507  FAQKEIVDLQKQVTVLLKECRDIQLRCGSSGHDQVDNSKAIAPVGMGVESDPENAILER- 565

Query: 542  LTFKDINGLVEQNXXXXXXXXXXXXXIENQEAEFKERLEMELKKHTEEA 688
            LTFKDINGLVEQN             IE++E  FKE++EMELKKHT+EA
Sbjct: 566  LTFKDINGLVEQNVQLRSLVRNLSDQIEDRETVFKEKIEMELKKHTDEA 614


>ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communis]
            gi|223541994|gb|EEF43539.1| Nucleoprotein TPR, putative
            [Ricinus communis]
          Length = 2095

 Score =  298 bits (763), Expect = 7e-79
 Identities = 160/241 (66%), Positives = 185/241 (76%), Gaps = 12/241 (4%)
 Frame = +2

Query: 2    ENNMLVPKIPVGVSGTALAASLLRDGWSLAKMYAKYQEAVDALRHEQLGRKESEAILQRV 181
            +NN+LVP+IPVGVSGTALAASLLRDGWSLAKMY KYQEAVDALRHEQLGRKESEAILQRV
Sbjct: 386  DNNLLVPRIPVGVSGTALAASLLRDGWSLAKMYTKYQEAVDALRHEQLGRKESEAILQRV 445

Query: 182  LYELEEKAEAIKDERVEHETMADAYSLMNHKLQNSLSENSNLQKTIQELKADLKRHERDY 361
            LYELEEKA  I DER E+  MA+++S++N KLQ+S+SE  NLQK IQELKADL+R ER+ 
Sbjct: 446  LYELEEKAGIIMDERAEYSRMAESHSVINQKLQHSISEQENLQKAIQELKADLRRSEREN 505

Query: 362  NLAQKEIDDLRKQ-----------VTVLLKECRDIQIRCGSIGNDIVDDALNI-ASRTST 505
            ++AQKEI DL+KQ           VTVLLKECRDIQ+RCGS  +D  DD   I A     
Sbjct: 506  SMAQKEIVDLQKQAWILGASFFHFVTVLLKECRDIQLRCGSTAHDDADDCTAIVAVEMDV 565

Query: 506  NTEAENVISEHLLTFKDINGLVEQNXXXXXXXXXXXXXIENQEAEFKERLEMELKKHTEE 685
             ++AE VISE LLTFK+INGLVEQN             +EN+E EFKE+LEMELKKH +E
Sbjct: 566  QSDAEKVISERLLTFKEINGLVEQNVQLRSLLRNLSDQVENKEMEFKEKLEMELKKHMDE 625

Query: 686  A 688
            A
Sbjct: 626  A 626


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