BLASTX nr result

ID: Glycyrrhiza24_contig00023067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023067
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|35552...   137   1e-30
ref|XP_003588454.1| F-box protein [Medicago truncatula] gi|35547...   136   2e-30
ref|XP_003637809.1| F-box/kelch-repeat protein, partial [Medicag...   134   6e-30
ref|XP_003637820.1| F-box/kelch-repeat protein, partial [Medicag...   133   2e-29
ref|XP_003637832.1| F-box protein [Medicago truncatula] gi|35550...   130   1e-28

>ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|355522707|gb|AET03161.1|
           F-box protein [Medicago truncatula]
          Length = 384

 Score =  137 bits (344), Expect = 1e-30
 Identities = 69/124 (55%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
 Frame = +3

Query: 138 MSQTIEKVSNQHIPTDLAFSILSKLPPKSLKRFGCVHKSWAHLFENTHFMSLYRNNFLSN 317
           M+ + +KVSN HIP D+AF ILSKL  K+LKRF CV KSW HLFEN +F+S++ NNF+  
Sbjct: 1   MASSDDKVSN-HIPDDVAFFILSKLSLKALKRFTCVRKSWVHLFENPNFISMFCNNFILK 59

Query: 318 NHSYYNDTCRVLLQQTPDR-DNSVLHLLSGERLENRVKLDYPPPFQEDKRGILMLGSVVN 494
           +HS+Y+DTC +L Q  P    +  L+LLSGE  EN+V L++PPPFQ D   + +LGS +N
Sbjct: 60  DHSFYDDTCLLLKQTVPGHYYHCALYLLSGENFENKVILNWPPPFQADDIDMDILGSGIN 119

Query: 495 GTLC 506
           GTLC
Sbjct: 120 GTLC 123


>ref|XP_003588454.1| F-box protein [Medicago truncatula] gi|355477502|gb|AES58705.1|
           F-box protein [Medicago truncatula]
          Length = 403

 Score =  136 bits (342), Expect = 2e-30
 Identities = 76/133 (57%), Positives = 96/133 (72%), Gaps = 4/133 (3%)
 Frame = +3

Query: 120 KMEKSMMSQTIEKVSNQHIPTDLAFSILSKLPPKSLKRFGCVHKSWAHLFENTHFMSLYR 299
           +ME SM+     KV N+HIP DL F +LSKLP KSLKRFGCV KS+A LFEN +FM++Y 
Sbjct: 6   RMENSMVVAN-GKV-NKHIPNDLIFFVLSKLPLKSLKRFGCVSKSYALLFENPNFMNMYC 63

Query: 300 NNFLSNNHSYYNDTCRVL---LQQTPDRDNSVLHLLSGERLENRVKLDYPPPFQEDKRGI 470
           NNF+SN+ SY +DTC +L   +      ++SV++LLSGER EN VK+D PPPF +D   I
Sbjct: 64  NNFISNSPSYCDDTCLLLQEIISPNSTEEHSVMYLLSGERFENVVKIDLPPPFCKDDYDI 123

Query: 471 LMLGSV-VNGTLC 506
            +LGSV VNGT C
Sbjct: 124 HILGSVSVNGTFC 136


>ref|XP_003637809.1| F-box/kelch-repeat protein, partial [Medicago truncatula]
           gi|355503744|gb|AES84947.1| F-box/kelch-repeat protein,
           partial [Medicago truncatula]
          Length = 209

 Score =  134 bits (338), Expect = 6e-30
 Identities = 77/130 (59%), Positives = 92/130 (70%), Gaps = 2/130 (1%)
 Frame = +3

Query: 123 MEKSMMSQTIEKVSNQHIPTDLAFSILSKLPPKSLKRFGCVHKSWAHLFENTHFMSLYRN 302
           M KS  S T EKVSN HI  DLAF ILSKLP KS KRF CV KSW+HLFEN +F+++YR 
Sbjct: 1   MMKSTDSFTAEKVSN-HIHDDLAFFILSKLPLKSSKRFSCVRKSWSHLFENPNFINMYRK 59

Query: 303 NFLSNNHSYYNDTCRVLLQQT-PDRDN-SVLHLLSGERLENRVKLDYPPPFQEDKRGILM 476
            F+S+  +Y  D   +LLQQT P   N  VL+LL GER EN+VK D+PPPFQED   I +
Sbjct: 60  YFISS--TYEEDGSSLLLQQTLPYLPNLHVLYLLFGERFENKVKFDWPPPFQEDNIAIHI 117

Query: 477 LGSVVNGTLC 506
           LG V+NG +C
Sbjct: 118 LGPVINGIVC 127


>ref|XP_003637820.1| F-box/kelch-repeat protein, partial [Medicago truncatula]
           gi|355503755|gb|AES84958.1| F-box/kelch-repeat protein,
           partial [Medicago truncatula]
          Length = 209

 Score =  133 bits (334), Expect = 2e-29
 Identities = 77/130 (59%), Positives = 95/130 (73%), Gaps = 2/130 (1%)
 Frame = +3

Query: 123 MEKSMMSQTIEKVSNQHIPTDLAFSILSKLPPKSLKRFGCVHKSWAHLFENTHFMSLYRN 302
           M +S  S   EKVSN HI  DLAFSILSKLP KSLKRF CV KSW+ LFEN++F+++YRN
Sbjct: 1   MMQSTDSVIAEKVSN-HIHDDLAFSILSKLPLKSLKRFSCVRKSWSCLFENSNFLNMYRN 59

Query: 303 NFLSNNHSYYNDTCRVLLQQT-PDRDN-SVLHLLSGERLENRVKLDYPPPFQEDKRGILM 476
            F+S+  +Y  D   +LLQQT P   N  VL+LL GER EN+VKL++PPPFQED   I +
Sbjct: 60  YFISS--TYEEDGPCLLLQQTLPYLPNLHVLYLLFGERFENKVKLNWPPPFQEDNIAIHI 117

Query: 477 LGSVVNGTLC 506
           LG V+NG +C
Sbjct: 118 LGPVINGIVC 127


>ref|XP_003637832.1| F-box protein [Medicago truncatula] gi|355503767|gb|AES84970.1|
           F-box protein [Medicago truncatula]
          Length = 392

 Score =  130 bits (327), Expect = 1e-28
 Identities = 73/128 (57%), Positives = 90/128 (70%)
 Frame = +3

Query: 123 MEKSMMSQTIEKVSNQHIPTDLAFSILSKLPPKSLKRFGCVHKSWAHLFENTHFMSLYRN 302
           M +S  S T EKVSN +I  DLAFSILSKLP KSLKRF CV KSW+ LFEN +FM++YRN
Sbjct: 1   MMRSTNSVTAEKVSN-YIHDDLAFSILSKLPLKSLKRFSCVRKSWSRLFENPNFMNMYRN 59

Query: 303 NFLSNNHSYYNDTCRVLLQQTPDRDNSVLHLLSGERLENRVKLDYPPPFQEDKRGILMLG 482
            F+S+  +Y  D    +L +     + VL+LL GER EN+VKLD+PPPFQED  GI +LG
Sbjct: 60  YFISS--TYEEDGSYPVLMRR--MVHHVLYLLFGERFENKVKLDWPPPFQEDNIGIHILG 115

Query: 483 SVVNGTLC 506
            V+N   C
Sbjct: 116 PVINDNFC 123


Top