BLASTX nr result

ID: Glycyrrhiza24_contig00023035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023035
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628563.1| Multidrug resistance protein ABC transporter...   168   6e-40
ref|XP_003547376.1| PREDICTED: ABC transporter C family member 4...   164   1e-38
ref|XP_003533361.1| PREDICTED: ABC transporter C family member 4...   162   5e-38
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   100   1e-19
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...    99   7e-19

>ref|XP_003628563.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula] gi|355522585|gb|AET03039.1| Multidrug
           resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 1498

 Score =  168 bits (426), Expect = 6e-40
 Identities = 93/149 (62%), Positives = 102/149 (68%)
 Frame = -3

Query: 448 SSPSWLTSPSCTLLAIDXXXXXSTPQLIVQWLRFIFLSPCPQRVXXXXXXXXXXXXXXXX 269
           SS SWLTSPSCTLL ID      TPQLI+QWL F+FLSPCPQR+                
Sbjct: 3   SSSSWLTSPSCTLLPIDSSSS--TPQLILQWLTFLFLSPCPQRLLLSALDSLFLLSLLAS 60

Query: 268 XAHRFYSRFXXXXXXXXXXTKPLLQEKDSDYRVTLWFKLPLLVTALLAIAYTVLGILAFT 89
             H+ YSR           TKPLL+EKDSDYRVTLWFKL LLVT LLAI YTVLGILAFT
Sbjct: 61  AVHKLYSR----ANTTSSITKPLLKEKDSDYRVTLWFKLTLLVTTLLAITYTVLGILAFT 116

Query: 88  QTNLASSWRQIEALFRLSQAIANIVVVVL 2
           QTN  SSW+QIEA FRL QA+ NIV+V+L
Sbjct: 117 QTNNLSSWKQIEAPFRLFQAVVNIVIVIL 145


>ref|XP_003547376.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1501

 Score =  164 bits (414), Expect = 1e-38
 Identities = 93/148 (62%), Positives = 101/148 (68%)
 Frame = -3

Query: 445 SPSWLTSPSCTLLAIDXXXXXSTPQLIVQWLRFIFLSPCPQRVXXXXXXXXXXXXXXXXX 266
           SPSWLTSPSC+ L ID      T  LIVQWLRFIFLSPCPQRV                 
Sbjct: 6   SPSWLTSPSCSTLDIDSSSP--TALLIVQWLRFIFLSPCPQRVLLSAVDSIFLLSLLAFA 63

Query: 265 AHRFYSRFXXXXXXXXXXTKPLLQEKDSDYRVTLWFKLPLLVTALLAIAYTVLGILAFTQ 86
           A + YSRF          TKPLLQEKDSDY+VT WFKLPLLVT LLAIAYTVL ILAFTQ
Sbjct: 64  AAKLYSRFTSNATSNSTITKPLLQEKDSDYKVTFWFKLPLLVTTLLAIAYTVLSILAFTQ 123

Query: 85  TNLASSWRQIEALFRLSQAIANIVVVVL 2
           T+L  SW+ IEALFRL QA++NIVV +L
Sbjct: 124 TSL-PSWKLIEALFRLFQAVSNIVVAIL 150


>ref|XP_003533361.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1506

 Score =  162 bits (409), Expect = 5e-38
 Identities = 93/153 (60%), Positives = 103/153 (67%)
 Frame = -3

Query: 460 LNNMSSPSWLTSPSCTLLAIDXXXXXSTPQLIVQWLRFIFLSPCPQRVXXXXXXXXXXXX 281
           +++  SPSWLTSPSC+ L ID      T  LIVQWLRFI LSPCPQRV            
Sbjct: 1   MSSSFSPSWLTSPSCSALDIDSSSP--TALLIVQWLRFILLSPCPQRVLLSAVDSIFLLS 58

Query: 280 XXXXXAHRFYSRFXXXXXXXXXXTKPLLQEKDSDYRVTLWFKLPLLVTALLAIAYTVLGI 101
                A + YSRF          TKPLLQEKDSDY+VT WFKLPLLVT LLAIAYTVL I
Sbjct: 59  LLAFAAVKLYSRFTSNTTSNNTITKPLLQEKDSDYKVTFWFKLPLLVTTLLAIAYTVLSI 118

Query: 100 LAFTQTNLASSWRQIEALFRLSQAIANIVVVVL 2
           LAFTQT+L SSW+ IEALFRL QA +NIVV +L
Sbjct: 119 LAFTQTSL-SSWKLIEALFRLFQAASNIVVAIL 150


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  100 bits (250), Expect = 1e-19
 Identities = 61/151 (40%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
 Frame = -3

Query: 451 MSSPSWLTSPSCTLLAIDXXXXXSTP-QLIVQWLRFIFLSPCPQRVXXXXXXXXXXXXXX 275
           MSS SW+T+ SC+   I       TP  LI+QWLRFIFLSPCPQR               
Sbjct: 1   MSSASWITTLSCSSSVI--ASSGETPFSLILQWLRFIFLSPCPQRALLSSIDLLFLLTLI 58

Query: 274 XXXAHRFYSRFXXXXXXXXXXTKPLLQEKDSDYRVTLWFKLPLLVTALLAIAYTVLGILA 95
                + YSRF           KPL++   +  R TLWFKL L  TALLA+ +  L ILA
Sbjct: 59  AFSVQKLYSRFISNGRSSSAINKPLIRNNRARLRTTLWFKLTLTATALLAVCHGFLCILA 118

Query: 94  FTQTNLASSWRQIEALFRLSQAIANIVVVVL 2
           F +      W+ I+ALF L +AI + ++ +L
Sbjct: 119 FAR-GAQMPWKLIDALFWLVEAITHFLITIL 148


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223537625|gb|EEF39248.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 55/150 (36%), Positives = 73/150 (48%)
 Frame = -3

Query: 451 MSSPSWLTSPSCTLLAIDXXXXXSTPQLIVQWLRFIFLSPCPQRVXXXXXXXXXXXXXXX 272
           M+SP W+TS SC+   I      S P L+ QWLRF+FLSPCPQR                
Sbjct: 1   MASPPWITSLSCSSSVIQSDGDTSFP-LLFQWLRFVFLSPCPQRALLSSVDLLFLLVLLV 59

Query: 271 XXAHRFYSRFXXXXXXXXXXTKPLLQEKDSDYRVTLWFKLPLLVTALLAIAYTVLGILAF 92
               + +SRF           KPL+       R T+WFKL L+VT  L   YT + ILAF
Sbjct: 60  FVLQKLFSRFSSSGHSKSDIDKPLIGNSRVLIRTTIWFKLSLIVTVFLTFGYTAVSILAF 119

Query: 91  TQTNLASSWRQIEALFRLSQAIANIVVVVL 2
              +    W+ ++  F L QAI + V+ +L
Sbjct: 120 ISESTELPWKIVDGSFWLVQAITHAVISIL 149


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