BLASTX nr result

ID: Glycyrrhiza24_contig00023018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023018
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517858.1| PREDICTED: uncharacterized protein LOC100796...   230   2e-58
ref|XP_003520127.1| PREDICTED: uncharacterized protein LOC100819...   223   4e-56
ref|XP_003614202.1| RNA polymerase II-associated protein [Medica...    99   1e-18
ref|XP_002278562.1| PREDICTED: uncharacterized protein LOC100258...    93   4e-17
ref|XP_004154590.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    87   3e-15

>ref|XP_003517858.1| PREDICTED: uncharacterized protein LOC100796310 [Glycine max]
          Length = 1614

 Score =  230 bits (587), Expect = 2e-58
 Identities = 133/245 (54%), Positives = 163/245 (66%), Gaps = 22/245 (8%)
 Frame = +1

Query: 16  SSNNNPTT-PFYSFPKPTVVPFPVARHRSHGP------------------HWRPLNXXXX 138
           S NNNPTT PF+ FPKPTV+PFPVARHRSHGP                  HWRPL+    
Sbjct: 44  SHNNNPTTTPFHFFPKPTVLPFPVARHRSHGPVSSLTSLVSWWQQFNEMQHWRPLSSKGN 103

Query: 139 XXXXXXXXXXXXXXXXXXXHKAFKEFEKVAPFANPVQRKKKKGLDFRKWKEITQDDSSSL 318
                               K F+EFEKV+ FA PVQR++KKGLDFRKWKEIT+DDSSS+
Sbjct: 104 DDGEGDDNVEDEED------KNFQEFEKVSAFAMPVQRRRKKGLDFRKWKEITRDDSSSM 157

Query: 319 GKELEEEASSFSRTTQKKKNEEGSKNADKKTSSYAEDSVSASMEVDAKPQLDNSNGVFID 498
           GKE EE+ SSFS+TT  KKN++GSK+  KKTSS ++D+V + M+VD KP LDNS+G FI+
Sbjct: 158 GKETEEDVSSFSQTT-GKKNKKGSKSTYKKTSS-SDDNVISPMKVDTKPLLDNSDGGFIN 215

Query: 499 SATATELD---KVDHLEKVEYAVINNHKKEKEFVPGRDQICSDRMADHNSGSVDVLRPER 669
           S T  E+D   KV+H  KV+Y  I + K + E VPG DQI SDRMAD+N GS+D+ RP +
Sbjct: 216 STTTMEVDTSNKVNHQAKVKYTRIFDDKGQNESVPGLDQISSDRMADYNFGSLDLQRPGQ 275

Query: 670 NYLTS 684
             LTS
Sbjct: 276 TDLTS 280


>ref|XP_003520127.1| PREDICTED: uncharacterized protein LOC100819615 [Glycine max]
          Length = 1570

 Score =  223 bits (567), Expect = 4e-56
 Identities = 126/227 (55%), Positives = 153/227 (67%), Gaps = 5/227 (2%)
 Frame = +1

Query: 19  SNNNPTT--PFYSFPKPTVVPFPVARHRSHGPHWRPLNXXXXXXXXXXXXXXXXXXXXXX 192
           S+NNPTT  PF+ FPKPTV+PFPVARHRSHGP                            
Sbjct: 47  SHNNPTTTPPFHFFPKPTVLPFPVARHRSHGP---------------------------- 78

Query: 193 XHKAFKEFEKVAPFANPVQRKKKKGLDFRKWKEITQDDSSSLGKELEEEASSFSRTTQKK 372
                 EFEKV+ FA PVQR++KKGLDFRKWKEIT+DDSSS GKE E++ SSFS+TT KK
Sbjct: 79  ------EFEKVSAFAKPVQRRRKKGLDFRKWKEITRDDSSSFGKESEKDVSSFSQTTGKK 132

Query: 373 KNEEGSKNADKKTSSYAEDSVSASMEVDAKPQLDNSNGVFIDSATATELD---KVDHLEK 543
           KNE+GSK+  KKTSS  +D+V + M+VD KP LDNS+G FI+S T  E+D   KVDH EK
Sbjct: 133 KNEKGSKSTYKKTSS-LDDNVISPMKVDTKPLLDNSDGGFINSTTTMEVDTLNKVDHEEK 191

Query: 544 VEYAVINNHKKEKEFVPGRDQICSDRMADHNSGSVDVLRPERNYLTS 684
           V++A I + K++ E VPG DQI SD M D+N GS+DV RP +  L S
Sbjct: 192 VKHARIYDDKEQNESVPGLDQISSDWMPDYNFGSLDVQRPGQTDLNS 238


>ref|XP_003614202.1| RNA polymerase II-associated protein [Medicago truncatula]
           gi|355515537|gb|AES97160.1| RNA polymerase II-associated
           protein [Medicago truncatula]
          Length = 1563

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 61/132 (46%), Positives = 78/132 (59%), Gaps = 6/132 (4%)
 Frame = +1

Query: 298 QDDSSSLGKE------LEEEASSFSRTTQKKKNEEGSKNADKKTSSYAEDSVSASMEVDA 459
           +DD+  +G E      LE++ SS+  TT +KKNE G KN  KK SSY++ SV ASMEVDA
Sbjct: 118 EDDTDFMGFEKAAAFDLEKDVSSYGPTTGRKKNENGGKNTSKKISSYSDGSVFASMEVDA 177

Query: 460 KPQLDNSNGVFIDSATATELDKVDHLEKVEYAVINNHKKEKEFVPGRDQICSDRMADHNS 639
           KPQL   +G FI+SAT+ ELD             N   K++ F   RD+I SDRM DH+S
Sbjct: 178 KPQLVKLDGGFINSATSMELD-----------TSNKDDKKEVFAAERDKIFSDRMTDHSS 226

Query: 640 GSVDVLRPERNY 675
            S      E+NY
Sbjct: 227 TS------EKNY 232


>ref|XP_002278562.1| PREDICTED: uncharacterized protein LOC100258889 [Vitis vinifera]
          Length = 1602

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 63/184 (34%), Positives = 89/184 (48%), Gaps = 2/184 (1%)
 Frame = +1

Query: 10  QQSSNNNPTTPFYSFPKPTVVPFPVARHRSHGPHWRPLNXXXXXXXXXXXXXXXXXXXXX 189
           ++  +  P  P  S P+PTV+PFPVARHRSHGPHW P                       
Sbjct: 45  EKGISGKPPAPS-SAPQPTVLPFPVARHRSHGPHWSPFGSKMGGGNDKKGADNSDSDDGE 103

Query: 190 XXHKAFKEFEKVAPFANPVQRKKKKGLDFRKWKEITQDDSSSLGKELEEEASSFSRTTQK 369
                   F+++A FANP++RK+KKGLD   W+E+  +D+S L  E +++        Q 
Sbjct: 104 DMD--LTGFDQIAAFANPIERKQKKGLDLSNWRELVPNDNSLLPAEKKDKVLLAELKEQN 161

Query: 370 KKNEEGSKNADK-KTSSYAEDSVSASMEVDA-KPQLDNSNGVFIDSATATELDKVDHLEK 543
            K +  ++NADK K SSYA     A  + D   P+  N        A   ELDK+D +  
Sbjct: 162 NKGKT-TENADKRKMSSYA-----ALADADVLNPKEMNVESGLNSVAANMELDKLDPVPD 215

Query: 544 VEYA 555
           +  A
Sbjct: 216 IARA 219


>ref|XP_004154590.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101210512
           [Cucumis sativus]
          Length = 1436

 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 46/130 (35%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
 Frame = +1

Query: 19  SNNNPTTPFYSFP--KPTVVPFPVARHRSHGPHWRPLNXXXXXXXXXXXXXXXXXXXXXX 192
           S+   +TPF S P  +P+V+PFPVARHRSHGPHW  L                       
Sbjct: 47  SDTEQSTPFVSLPPPRPSVLPFPVARHRSHGPHWESLT-----SKKGGDSIKADRQKYGE 101

Query: 193 XHKAFKEFEKVAPFANPVQRKKKKGLDFRKWKEITQDDSSSLGKELEEEASSFSRTTQKK 372
             +     + +A FANP+QRKKK  LDF +W+E   D +    K  E+E  S ++T    
Sbjct: 102 EDETMMVADSIANFANPIQRKKKSSLDFGRWREAASDHNHGAAKREEKELQSLAKTESLM 161

Query: 373 KNEEGSKNAD 402
           ++ E +   D
Sbjct: 162 RSGEANSCTD 171


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