BLASTX nr result

ID: Glycyrrhiza24_contig00023011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023011
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540642.1| PREDICTED: transcription elongation regulato...    60   2e-07
ref|XP_003538971.1| PREDICTED: transcription elongation regulato...    56   4e-06

>ref|XP_003540642.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 930

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 41/107 (38%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
 Frame = +3

Query: 12  MASPAWLPQESQQP----EXXXXXXXXXXXXXXXXXXXXXXXXXFSYGAHQNVNASGNTQ 179
           MASPAWLPQE+Q P                              F++G  QNVNASG++Q
Sbjct: 1   MASPAWLPQEAQPPVSGETPLPMASSTPNSAPATPSTAPAPASPFAHGMLQNVNASGSSQ 60

Query: 180 QPSTHSVVKPNSALNXXXXXXXXXXXXXXXXXXSFSYNIPHSGAAFS 320
             STH  +  NSA+N                  SFSYNIP SGA FS
Sbjct: 61  LLSTHPAIISNSAVN---PMVVQPPGVSSHAAPSFSYNIPQSGAIFS 104


>ref|XP_003538971.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 1007

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/63 (50%), Positives = 37/63 (58%)
 Frame = +3

Query: 132 FSYGAHQNVNASGNTQQPSTHSVVKPNSALNXXXXXXXXXXXXXXXXXXSFSYNIPHSGA 311
           F+YG  QNVNASG++QQ STH  +K NSA+N                  SFSYNIP SGA
Sbjct: 80  FAYGMLQNVNASGSSQQSSTHPGMKSNSAVN---PMVVQPPGVSLHAAPSFSYNIPQSGA 136

Query: 312 AFS 320
            FS
Sbjct: 137 IFS 139


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